RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 SMAGPQ0VAQ4 97 aa11.72□□□□□ -0.53
CDKN1A-201ENST00000244741 PRO0255Q9UI72 69 aa11.72□□□□□ -0.53
CDKN1A-201ENST00000244741 ANKRD29Q8N6D5 301 aa11.72□□□□□ -0.53
CDKN1A-201ENST00000244741 PPDPFLQ8WWR9 84 aa11.72□□□□□ -0.53
CDKN1A-201ENST00000244741 GYPEP15421 78 aa11.71□□□□□ -0.53
CDKN1A-201ENST00000244741 CIRBPQ14011 172 aaKnown RBP11.71□□□□□ -0.53
CDKN1A-201ENST00000244741 LYSTQ99698 3801 aa11.71□□□□□ -0.53
CDKN1A-201ENST00000244741 ICOSQ9Y6W8 199 aa11.71□□□□□ -0.53
CDKN1A-201ENST00000244741 TENM2Q9NT68 2774 aa11.71□□□□□ -0.54
CDKN1A-201ENST00000244741 A0A0U1RRA0 63 aa11.71□□□□□ -0.54
CDKN1A-201ENST00000244741 ATXN8Q156A1 80 aa11.71□□□□□ -0.54
CDKN1A-201ENST00000244741 GAGE6Q13070 117 aa11.7□□□□□ -0.54
CDKN1A-201ENST00000244741 LINC00308Q8TCZ7 52 aa11.69□□□□□ -0.54
CDKN1A-201ENST00000244741 H7C423 109 aa11.69□□□□□ -0.54
CDKN1A-201ENST00000244741 LINC01620Q4KN68 170 aa11.69□□□□□ -0.54
CDKN1A-201ENST00000244741 TRBV6-8A0A0A6YYG3 113 aa11.68□□□□□ -0.54
CDKN1A-201ENST00000244741 TRAV10A0A0B4J240 114 aa11.68□□□□□ -0.54
CDKN1A-201ENST00000244741 RPL13AP40429 203 aaKnown RBP11.68□□□□□ -0.54
CDKN1A-201ENST00000244741 CDIP1Q9H305 208 aa11.68□□□□□ -0.54
CDKN1A-201ENST00000244741 STARD9Q9P2P6 4700 aa11.67□□□□□ -0.54
CDKN1A-201ENST00000244741 M0QXV9 152 aa11.67□□□□□ -0.54
CDKN1A-201ENST00000244741 IGLV4-60A0A075B6I1 120 aa11.67□□□□□ -0.54
CDKN1A-201ENST00000244741 SOSTDC1Q6X4U4 206 aa11.67□□□□□ -0.54
CDKN1A-201ENST00000244741 IGKV3OR2-268A0A0C4DH90 116 aa11.65□□□□□ -0.54
CDKN1A-201ENST00000244741 MEIG1Q5JSS6 88 aa11.65□□□□□ -0.54
CDKN1A-201ENST00000244741 CLEC2BQ92478 149 aa11.65□□□□□ -0.54
CDKN1A-201ENST00000244741 CHCHD5Q9BSY4 110 aa11.65□□□□□ -0.54
CDKN1A-201ENST00000244741 COX6CP09669 75 aa11.64□□□□□ -0.55
CDKN1A-201ENST00000244741 PLECQ15149 4684 aaKnown RBP11.63□□□□□ -0.55
CDKN1A-201ENST00000244741 TRBV10-2A0A0K0K1G8 114 aa11.63□□□□□ -0.55
CDKN1A-201ENST00000244741 HERV-K104P63124 156 aa11.63□□□□□ -0.55
CDKN1A-201ENST00000244741 DYNC2H1Q8NCM8 4307 aaKnown RBP11.62□□□□□ -0.55
CDKN1A-201ENST00000244741 NTN5Q8WTR8 489 aaPredicted RBP11.62□□□□□ -0.55
CDKN1A-201ENST00000244741 LINC01600Q96MT4 127 aa11.62□□□□□ -0.55
CDKN1A-201ENST00000244741 SCGB1A1P11684 91 aa11.61□□□□□ -0.55
CDKN1A-201ENST00000244741 COX7B2Q8TF08 81 aa11.61□□□□□ -0.55
CDKN1A-201ENST00000244741 MRPL23Q16540 153 aaKnown RBP11.6□□□□□ -0.55
CDKN1A-201ENST00000244741 IGHV3OR16-9A0A0B4J2B5 98 aa11.6□□□□□ -0.55
CDKN1A-201ENST00000244741 LST1O00453 97 aa11.6□□□□□ -0.55
CDKN1A-201ENST00000244741 COPS9Q8WXC6 57 aa11.6□□□□□ -0.55
CDKN1A-201ENST00000244741 TOMM7Q9P0U1 55 aa11.59□□□□□ -0.55
CDKN1A-201ENST00000244741 C2orf82Q6UX34 121 aa11.58□□□□□ -0.56
CDKN1A-201ENST00000244741 TEX49A0A1B0GTD5 131 aa11.57□□□□□ -0.56
CDKN1A-201ENST00000244741 MT-ATP8P03928 68 aa11.57□□□□□ -0.56
CDKN1A-201ENST00000244741 XGP55808 180 aa11.57□□□□□ -0.56
CDKN1A-201ENST00000244741 C5orf38Q86SI9 138 aa11.57□□□□□ -0.56
CDKN1A-201ENST00000244741 LINC00959A0A1B0GUT2 108 aa11.56□□□□□ -0.56
CDKN1A-201ENST00000244741 H3BNG1 76 aa11.56□□□□□ -0.56
CDKN1A-201ENST00000244741 A0A087WZ39 114 aa11.55□□□□□ -0.56
CDKN1A-201ENST00000244741 TMEM262E9PQX1 116 aa11.55□□□□□ -0.56
CDKN1A-201ENST00000244741 ESRGQ1W209 222 aa11.55□□□□□ -0.56
CDKN1A-201ENST00000244741 LYPD5Q6UWN5 251 aa11.55□□□□□ -0.56
CDKN1A-201ENST00000244741 MIR7-3HGQ8N6C7 128 aa11.55□□□□□ -0.56
CDKN1A-201ENST00000244741 MUC7Q8TAX7 377 aa11.55□□□□□ -0.56
CDKN1A-201ENST00000244741 WWC2-AS2Q96NR7 200 aa11.55□□□□□ -0.56
CDKN1A-201ENST00000244741 H3BT86 120 aa11.54□□□□□ -0.56
CDKN1A-201ENST00000244741 PPDPFQ9H3Y8 114 aa11.54□□□□□ -0.56
CDKN1A-201ENST00000244741 NUPR2A6NF83 97 aa11.54□□□□□ -0.56
CDKN1A-201ENST00000244741 COX7A2LO14548 114 aa11.53□□□□□ -0.56
CDKN1A-201ENST00000244741 UBE2WQ96B02 151 aa11.53□□□□□ -0.56
CDKN1A-201ENST00000244741 C15orf53Q8NAA6 179 aa11.52□□□□□ -0.56
CDKN1A-201ENST00000244741 APLNQ9ULZ1 77 aa11.52□□□□□ -0.57
CDKN1A-201ENST00000244741 KLK5Q9Y337 293 aaPredicted RBP11.52□□□□□ -0.57
CDKN1A-201ENST00000244741 A0A1B0GUV1 79 aa11.51□□□□□ -0.57
CDKN1A-201ENST00000244741 LINC00158P58513 81 aa11.51□□□□□ -0.57
CDKN1A-201ENST00000244741 Q8N3U1 123 aa11.51□□□□□ -0.57
CDKN1A-201ENST00000244741 XCL1P47992 114 aa11.5□□□□□ -0.57
CDKN1A-201ENST00000244741 CLPSL2Q6UWE3 100 aa11.5□□□□□ -0.57
CDKN1A-201ENST00000244741 IGKV2-28A0A075B6P5 120 aa11.49□□□□□ -0.57
CDKN1A-201ENST00000244741 IGKV2D-28P01615 120 aa11.49□□□□□ -0.57
CDKN1A-201ENST00000244741 SND1-IT1Q9HBX3 110 aa11.49□□□□□ -0.57
CDKN1A-201ENST00000244741 IBA57-AS1B1ANH7 110 aa11.48□□□□□ -0.57
CDKN1A-201ENST00000244741 SS18Q15532 418 aa11.48□□□□□ -0.57
CDKN1A-201ENST00000244741 LINC00337Q8N6G1 96 aa11.48□□□□□ -0.57
CDKN1A-201ENST00000244741 LINC00588Q9Y4M8 146 aa11.48□□□□□ -0.57
CDKN1A-201ENST00000244741 TRAV13-2A0A0B4J235 113 aa11.48□□□□□ -0.57
CDKN1A-201ENST00000244741 PFN2P35080 140 aa11.48□□□□□ -0.57
CDKN1A-201ENST00000244741 CCL18P55774 89 aa11.48□□□□□ -0.57
CDKN1A-201ENST00000244741 WFDC10BQ8IUB3 73 aa11.48□□□□□ -0.57
CDKN1A-201ENST00000244741 TRAV8-4A0A0B4J246 113 aa11.47□□□□□ -0.57
CDKN1A-201ENST00000244741 LELP1Q5T871 98 aa11.47□□□□□ -0.57
CDKN1A-201ENST00000244741 C6orf226Q5I0X4 101 aa11.47□□□□□ -0.57
CDKN1A-201ENST00000244741 CRPP02741 224 aa11.46□□□□□ -0.57
CDKN1A-201ENST00000244741 FAM218AQ96MZ4 157 aa11.46□□□□□ -0.57
CDKN1A-201ENST00000244741 DNAH1Q9P2D7 4330 aa11.46□□□□□ -0.58
CDKN1A-201ENST00000244741 CASC10Q5T4H9 136 aa11.45□□□□□ -0.58
CDKN1A-201ENST00000244741 RPL28P46779 137 aaKnown RBP11.45□□□□□ -0.58
CDKN1A-201ENST00000244741 LINC00269Q8N2A0 174 aa11.44□□□□□ -0.58
CDKN1A-201ENST00000244741 TRACP01848 142 aa11.43□□□□□ -0.58
CDKN1A-201ENST00000244741 UBE2DNLQ8IWF7 75 aa11.43□□□□□ -0.58
CDKN1A-201ENST00000244741 Q8IZM0 81 aa11.42□□□□□ -0.58
CDKN1A-201ENST00000244741 SMIM11BQ8TCY0 68 aa11.41□□□□□ -0.58
CDKN1A-201ENST00000244741 KMT2AQ03164 3969 aa11.41□□□□□ -0.58
CDKN1A-201ENST00000244741 CKS1BP61024 79 aa11.41□□□□□ -0.58
CDKN1A-201ENST00000244741 BAALC-AS2P0C853 105 aa11.4□□□□□ -0.58
CDKN1A-201ENST00000244741 LINC01561Q8N1V8 128 aa11.4□□□□□ -0.58
CDKN1A-201ENST00000244741 VPS13DQ5THJ4 4388 aa11.39□□□□□ -0.59
CDKN1A-201ENST00000244741 IGLV10-54A0A075B6I4 117 aa11.39□□□□□ -0.59
CDKN1A-201ENST00000244741 ANGP03950 147 aaKnown RBP11.39□□□□□ -0.59
CDKN1A-201ENST00000244741 CD164L2Q6UWJ8 174 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms