RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 Q8N2B8 174 aa9.88□□□□□ -0.83
HCFC2-201ENST00000229330 DNAH12Q6ZR08 3092 aa9.88□□□□□ -0.83
HCFC2-201ENST00000229330 IGLV4-60A0A075B6I1 120 aa9.87□□□□□ -0.83
HCFC2-201ENST00000229330 LINC00315P59091 139 aa9.87□□□□□ -0.83
HCFC2-201ENST00000229330 ESRGQ1W209 222 aa9.87□□□□□ -0.83
HCFC2-201ENST00000229330 C9orf116Q5BN46 136 aaPredicted RBP9.87□□□□□ -0.83
HCFC2-201ENST00000229330 IGLV5-39A0A0G2JS06 123 aa9.87□□□□□ -0.83
HCFC2-201ENST00000229330 UNQ6190/PRO20217Q6UXQ8 127 aa9.86□□□□□ -0.83
HCFC2-201ENST00000229330 C18orf65Q6ZTR6 163 aa9.86□□□□□ -0.83
HCFC2-201ENST00000229330 FHL3Q13643 280 aa9.86□□□□□ -0.83
HCFC2-201ENST00000229330 ADAMTS20P59510 1910 aa9.86□□□□□ -0.83
HCFC2-201ENST00000229330 RETNQ9HD89 108 aa9.85□□□□□ -0.83
HCFC2-201ENST00000229330 NANOS2P60321 138 aaKnown RBP9.85□□□□□ -0.83
HCFC2-201ENST00000229330 CXCL6P80162 114 aa9.85□□□□□ -0.83
HCFC2-201ENST00000229330 BEAN1Q3B7T3 259 aa9.85□□□□□ -0.83
HCFC2-201ENST00000229330 A0A1W2PPR1 153 aa9.85□□□□□ -0.83
HCFC2-201ENST00000229330 BCE1O60756 84 aa9.85□□□□□ -0.83
HCFC2-201ENST00000229330 AVPP01185 164 aa9.84□□□□□ -0.83
HCFC2-201ENST00000229330 LINC00575Q6W349 94 aa9.84□□□□□ -0.83
HCFC2-201ENST00000229330 LELP1Q5T871 98 aa9.84□□□□□ -0.83
HCFC2-201ENST00000229330 LINC00208Q96KT6 92 aa9.84□□□□□ -0.83
HCFC2-201ENST00000229330 BRI3O95415 125 aa9.83□□□□□ -0.84
HCFC2-201ENST00000229330 NHLRC4P0CG21 123 aaPredicted RBP9.83□□□□□ -0.84
HCFC2-201ENST00000229330 WFDC10AQ9H1F0 79 aa9.83□□□□□ -0.84
HCFC2-201ENST00000229330 FAM218AQ96MZ4 157 aa9.83□□□□□ -0.84
HCFC2-201ENST00000229330 Q8N9L7 120 aa9.83□□□□□ -0.84
HCFC2-201ENST00000229330 SPTBN4Q9H254 2564 aa9.82□□□□□ -0.84
HCFC2-201ENST00000229330 LY6G6DO95868 133 aa9.82□□□□□ -0.84
HCFC2-201ENST00000229330 ODF3L2Q3SX64 289 aa9.81□□□□□ -0.84
HCFC2-201ENST00000229330 KRTAP10-9P60411 292 aa9.81□□□□□ -0.84
HCFC2-201ENST00000229330 C1orf137Q5JT78 98 aa9.81□□□□□ -0.84
HCFC2-201ENST00000229330 LINC01006Q8NI28 216 aa9.81□□□□□ -0.84
HCFC2-201ENST00000229330 RAI1Q7Z5J4 1906 aaPredicted RBP9.81□□□□□ -0.84
HCFC2-201ENST00000229330 CASC2Q6XLA1 102 aa9.8□□□□□ -0.84
HCFC2-201ENST00000229330 COL4A2P08572 1712 aa9.8□□□□□ -0.84
HCFC2-201ENST00000229330 RPL37AP8A6NKH3 93 aa9.8□□□□□ -0.84
HCFC2-201ENST00000229330 CHD8Q9HCK8 2581 aa9.8□□□□□ -0.84
HCFC2-201ENST00000229330 LINC00482Q8N8I6 264 aa9.79□□□□□ -0.84
HCFC2-201ENST00000229330 PLA2G2AP14555 144 aa9.79□□□□□ -0.84
HCFC2-201ENST00000229330 FAM19A4Q96LR4 140 aa9.79□□□□□ -0.84
HCFC2-201ENST00000229330 C11orf45Q8TAV5 145 aa9.78□□□□□ -0.84
HCFC2-201ENST00000229330 CEP350Q5VT06 3117 aa9.78□□□□□ -0.84
HCFC2-201ENST00000229330 IGLV5-45A0A087WSX0 123 aa9.77□□□□□ -0.84
HCFC2-201ENST00000229330 EGFEM1PQ0D2K5 195 aa9.77□□□□□ -0.84
HCFC2-201ENST00000229330 TLN2Q9Y4G6 2542 aa9.77□□□□□ -0.85
HCFC2-201ENST00000229330 SMCR5Q8TEV8 140 aa9.77□□□□□ -0.85
HCFC2-201ENST00000229330 A8MTW9 85 aa9.77□□□□□ -0.85
HCFC2-201ENST00000229330 USP9XQ93008 2570 aaPredicted RBP9.76□□□□□ -0.85
HCFC2-201ENST00000229330 C14orf177Q52M58 125 aa9.76□□□□□ -0.85
HCFC2-201ENST00000229330 FHL2Q14192 279 aa9.76□□□□□ -0.85
HCFC2-201ENST00000229330 LINC01561Q8N1V8 128 aa9.75□□□□□ -0.85
HCFC2-201ENST00000229330 PTPRBP23467 1997 aa9.75□□□□□ -0.85
HCFC2-201ENST00000229330 DEFB131BA0A096LNP1 70 aa9.74□□□□□ -0.85
HCFC2-201ENST00000229330 LITAFQ99732 161 aa9.74□□□□□ -0.85
HCFC2-201ENST00000229330 A0A1B0GUV1 79 aa9.73□□□□□ -0.85
HCFC2-201ENST00000229330 SPATA3Q8NHX4 192 aa9.73□□□□□ -0.85
HCFC2-201ENST00000229330 USP9YO00507 2555 aaPredicted RBP9.72□□□□□ -0.85
HCFC2-201ENST00000229330 ABCA12Q86UK0 2595 aa9.72□□□□□ -0.85
HCFC2-201ENST00000229330 C6orf223Q8N319 242 aa9.72□□□□□ -0.85
HCFC2-201ENST00000229330 KPRPQ5T749 579 aaPredicted RBP9.71□□□□□ -0.85
HCFC2-201ENST00000229330 JMJD1CQ15652 2540 aa9.71□□□□□ -0.86
HCFC2-201ENST00000229330 C10orf25Q5T742 122 aa9.71□□□□□ -0.86
HCFC2-201ENST00000229330 IGHV3OR16-9A0A0B4J2B5 98 aa9.7□□□□□ -0.86
HCFC2-201ENST00000229330 hDV103S1A0JD37 113 aa9.7□□□□□ -0.86
HCFC2-201ENST00000229330 K7ERS5 55 aa9.7□□□□□ -0.86
HCFC2-201ENST00000229330 H0Y9P7 68 aa9.69□□□□□ -0.86
HCFC2-201ENST00000229330 C11orf72Q8NBR9 251 aa9.69□□□□□ -0.86
HCFC2-201ENST00000229330 SMR3AQ99954 134 aa9.69□□□□□ -0.86
HCFC2-201ENST00000229330 PLAC8L1A1L4L8 177 aa9.69□□□□□ -0.86
HCFC2-201ENST00000229330 HCG22E2RYF7 251 aa9.69□□□□□ -0.86
HCFC2-201ENST00000229330 C4orf48Q5BLP8 95 aa9.69□□□□□ -0.86
HCFC2-201ENST00000229330 TRAV10A0A0B4J240 114 aa9.69□□□□□ -0.86
HCFC2-201ENST00000229330 LIMD2Q9BT23 127 aa9.69□□□□□ -0.86
HCFC2-201ENST00000229330 Q6ZQT0 140 aa9.68□□□□□ -0.86
HCFC2-201ENST00000229330 SMIM29Q86T20 159 aa9.68□□□□□ -0.86
HCFC2-201ENST00000229330 ZFYVE26Q68DK2 2539 aa9.68□□□□□ -0.86
HCFC2-201ENST00000229330 LOC110117498A0A087WWA1 95 aa9.66□□□□□ -0.86
HCFC2-201ENST00000229330 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.66□□□□□ -0.86
HCFC2-201ENST00000229330 TM2D3Q9BRN9 247 aa9.65□□□□□ -0.86
HCFC2-201ENST00000229330 IGHV4-30-4P0DP06 118 aa9.65□□□□□ -0.86
HCFC2-201ENST00000229330 PCOTHQ58A44 107 aa9.65□□□□□ -0.86
HCFC2-201ENST00000229330 SETD2Q9BYW2 2564 aaPredicted RBP9.64□□□□□ -0.87
HCFC2-201ENST00000229330 SPINK6Q6UWN8 80 aa9.64□□□□□ -0.87
HCFC2-201ENST00000229330 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.64□□□□□ -0.87
HCFC2-201ENST00000229330 Q9UF83 564 aa9.64□□□□□ -0.87
HCFC2-201ENST00000229330 ZNF462Q96JM2 2506 aa9.63□□□□□ -0.87
HCFC2-201ENST00000229330 A0A087WSZ3 146 aa9.63□□□□□ -0.87
HCFC2-201ENST00000229330 REG3GQ6UW15 175 aa9.63□□□□□ -0.87
HCFC2-201ENST00000229330 DEFB116Q30KQ4 102 aa9.62□□□□□ -0.87
HCFC2-201ENST00000229330 IGLV1-51P01701 117 aa9.61□□□□□ -0.87
HCFC2-201ENST00000229330 IGLV9-49A0A0B4J1Y8 123 aa9.6□□□□□ -0.87
HCFC2-201ENST00000229330 ZNF706Q9Y5V0 76 aaPredicted RBP9.6□□□□□ -0.87
HCFC2-201ENST00000229330 LRRK2Q5S007 2527 aa9.6□□□□□ -0.87
HCFC2-201ENST00000229330 FN1P02751 2386 aaKnown RBP9.6□□□□□ -0.87
HCFC2-201ENST00000229330 C2orf48Q96LS8 159 aa9.6□□□□□ -0.87
HCFC2-201ENST00000229330 C1orf64Q8NEQ6 169 aa9.59□□□□□ -0.87
HCFC2-201ENST00000229330 F8WDY8 70 aa9.58□□□□□ -0.88
HCFC2-201ENST00000229330 KIAA0087Q14695 138 aa9.58□□□□□ -0.88
HCFC2-201ENST00000229330 IL17DQ8TAD2 202 aa9.58□□□□□ -0.88
HCFC2-201ENST00000229330 OXLD1Q5BKU9 147 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms