RNA–Protein interactions for RNA: ENST00000222753.5

HOXA13-201, Transcript of homeobox A13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA13, Length 5,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13-201ENST00000222753 WFDC10BQ8IUB3 73 aa13.29□□□□□ -0.28
HOXA13-201ENST00000222753 LINC00846Q9NV44 126 aa13.29□□□□□ -0.28
HOXA13-201ENST00000222753 IGLV5-39A0A0G2JS06 123 aa13.29□□□□□ -0.28
HOXA13-201ENST00000222753 IGKV2-28A0A075B6P5 120 aa13.29□□□□□ -0.28
HOXA13-201ENST00000222753 IGKV2D-28P01615 120 aa13.29□□□□□ -0.28
HOXA13-201ENST00000222753 CHD7Q9P2D1 2997 aa13.28□□□□□ -0.28
HOXA13-201ENST00000222753 UNQ6190/PRO20217Q6UXQ8 127 aa13.28□□□□□ -0.28
HOXA13-201ENST00000222753 Q6ZSN1 163 aa13.28□□□□□ -0.28
HOXA13-201ENST00000222753 C1orf195Q5TG92 126 aa13.28□□□□□ -0.28
HOXA13-201ENST00000222753 EGFEM1PQ0D2K5 195 aa13.27□□□□□ -0.29
HOXA13-201ENST00000222753 TRBV10-3A0A0K0K1G6 114 aa13.27□□□□□ -0.29
HOXA13-201ENST00000222753 LY6G6DO95868 133 aa13.27□□□□□ -0.29
HOXA13-201ENST00000222753 LINC01561Q8N1V8 128 aa13.26□□□□□ -0.29
HOXA13-201ENST00000222753 Q8N3U1 123 aa13.26□□□□□ -0.29
HOXA13-201ENST00000222753 HILS1P60008 231 aa13.26□□□□□ -0.29
HOXA13-201ENST00000222753 FAM19A4Q96LR4 140 aa13.25□□□□□ -0.29
HOXA13-201ENST00000222753 BPTFQ12830 3046 aa13.25□□□□□ -0.29
HOXA13-201ENST00000222753 LOC107984640A0A0U1RRK4 108 aa13.25□□□□□ -0.29
HOXA13-201ENST00000222753 LINC00337Q8N6G1 96 aa13.25□□□□□ -0.29
HOXA13-201ENST00000222753 KPRPQ5T749 579 aaPredicted RBP13.24□□□□□ -0.29
HOXA13-201ENST00000222753 WFDC13Q8IUB5 93 aa13.24□□□□□ -0.29
HOXA13-201ENST00000222753 A0A1B0GUV1 79 aa13.23□□□□□ -0.29
HOXA13-201ENST00000222753 FHL2Q14192 279 aa13.23□□□□□ -0.29
HOXA13-201ENST00000222753 CRYGAP11844 174 aa13.23□□□□□ -0.29
HOXA13-201ENST00000222753 RANBP2P49792 3224 aaKnown RBP13.22□□□□□ -0.29
HOXA13-201ENST00000222753 A0A1W2PPR1 153 aa13.22□□□□□ -0.29
HOXA13-201ENST00000222753 PRR3P79522 188 aaKnown RBP13.22□□□□□ -0.29
HOXA13-201ENST00000222753 RAI1Q7Z5J4 1906 aaPredicted RBP13.22□□□□□ -0.29
HOXA13-201ENST00000222753 A0A096LNI7 61 aa13.21□□□□□ -0.29
HOXA13-201ENST00000222753 SEC61GP60059 68 aa13.21□□□□□ -0.29
HOXA13-201ENST00000222753 PRYO14603 147 aa13.21□□□□□ -0.29
HOXA13-201ENST00000222753 C9orf116Q5BN46 136 aaPredicted RBP13.21□□□□□ -0.29
HOXA13-201ENST00000222753 FAM30AQ9NZY2 134 aa13.2□□□□□ -0.3
HOXA13-201ENST00000222753 IGLV1-51P01701 117 aa13.2□□□□□ -0.3
HOXA13-201ENST00000222753 LINC00575Q6W349 94 aa13.19□□□□□ -0.3
HOXA13-201ENST00000222753 Q6ZVQ6 151 aa13.19□□□□□ -0.3
HOXA13-201ENST00000222753 IGLV5-45A0A087WSX0 123 aa13.19□□□□□ -0.3
HOXA13-201ENST00000222753 PPDPFQ9H3Y8 114 aa13.19□□□□□ -0.3
HOXA13-201ENST00000222753 MTORP42345 2549 aa13.19□□□□□ -0.3
HOXA13-201ENST00000222753 POLQO75417 2590 aa13.19□□□□□ -0.3
HOXA13-201ENST00000222753 PRR4Q16378 134 aa13.18□□□□□ -0.3
HOXA13-201ENST00000222753 MKI67P46013 3256 aaKnown RBP13.18□□□□□ -0.3
HOXA13-201ENST00000222753 CELA1Q9UNI1 258 aa13.18□□□□□ -0.3
HOXA13-201ENST00000222753 KRTAP10-9P60411 292 aa13.17□□□□□ -0.3
HOXA13-201ENST00000222753 BRCA2P51587 3418 aa13.17□□□□□ -0.3
HOXA13-201ENST00000222753 A6NED7 52 aa13.17□□□□□ -0.3
HOXA13-201ENST00000222753 RPS28P62857 69 aaKnown RBP13.17□□□□□ -0.3
HOXA13-201ENST00000222753 HTTP42858 3142 aa13.17□□□□□ -0.3
HOXA13-201ENST00000222753 BCE1O60756 84 aa13.16□□□□□ -0.3
HOXA13-201ENST00000222753 LAMA2P24043 3122 aaKnown RBP13.16□□□□□ -0.3
HOXA13-201ENST00000222753 C1orf137Q5JT78 98 aa13.16□□□□□ -0.3
HOXA13-201ENST00000222753 TRAV10A0A0B4J240 114 aa13.15□□□□□ -0.3
HOXA13-201ENST00000222753 LINC01547P58512 204 aaPredicted RBP13.15□□□□□ -0.3
HOXA13-201ENST00000222753 CXCL6P80162 114 aa13.15□□□□□ -0.3
HOXA13-201ENST00000222753 TMEM254Q8TBM7 123 aa13.15□□□□□ -0.3
HOXA13-201ENST00000222753 C11orf72Q8NBR9 251 aa13.15□□□□□ -0.31
HOXA13-201ENST00000222753 LRRK2Q5S007 2527 aa13.15□□□□□ -0.31
HOXA13-201ENST00000222753 Q8N2B8 174 aa13.14□□□□□ -0.31
HOXA13-201ENST00000222753 PLA2G2AP14555 144 aa13.14□□□□□ -0.31
HOXA13-201ENST00000222753 SOSTDC1Q6X4U4 206 aa13.14□□□□□ -0.31
HOXA13-201ENST00000222753 PRR15LQ9BU68 103 aa13.14□□□□□ -0.31
HOXA13-201ENST00000222753 RPL37AP8A6NKH3 93 aa13.13□□□□□ -0.31
HOXA13-201ENST00000222753 Q8N9L7 120 aa13.12□□□□□ -0.31
HOXA13-201ENST00000222753 IGHV3OR16-9A0A0B4J2B5 98 aa13.12□□□□□ -0.31
HOXA13-201ENST00000222753 F8WDY8 70 aa13.11□□□□□ -0.31
HOXA13-201ENST00000222753 LAMA3Q16787 3333 aa13.11□□□□□ -0.31
HOXA13-201ENST00000222753 CASC2Q6XLA1 102 aa13.1□□□□□ -0.31
HOXA13-201ENST00000222753 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.1□□□□□ -0.31
HOXA13-201ENST00000222753 C7orf33Q8WU49 177 aa13.09□□□□□ -0.31
HOXA13-201ENST00000222753 LINC00208Q96KT6 92 aa13.07□□□□□ -0.32
HOXA13-201ENST00000222753 KLK9Q2XQG4 91 aa13.07□□□□□ -0.32
HOXA13-201ENST00000222753 ZNF706Q9Y5V0 76 aaPredicted RBP13.07□□□□□ -0.32
HOXA13-201ENST00000222753 C2orf48Q96LS8 159 aa13.06□□□□□ -0.32
HOXA13-201ENST00000222753 PTPRBP23467 1997 aa13.06□□□□□ -0.32
HOXA13-201ENST00000222753 TRBV7-6A0A0J9YX20 115 aa13.06□□□□□ -0.32
HOXA13-201ENST00000222753 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.05□□□□□ -0.32
HOXA13-201ENST00000222753 A0A0J9YWU9 116 aa13.05□□□□□ -0.32
HOXA13-201ENST00000222753 FAM218AQ96MZ4 157 aa13.05□□□□□ -0.32
HOXA13-201ENST00000222753 ZNF462Q96JM2 2506 aa13.04□□□□□ -0.32
HOXA13-201ENST00000222753 SMR3AQ99954 134 aa13.04□□□□□ -0.32
HOXA13-201ENST00000222753 PRO0628Q9UI54 55 aa13.04□□□□□ -0.32
HOXA13-201ENST00000222753 C6orf223Q8N319 242 aa13.03□□□□□ -0.32
HOXA13-201ENST00000222753 LRCOL1A6NCL2 159 aa13.02□□□□□ -0.32
HOXA13-201ENST00000222753 IGHV4-30-4P0DP06 118 aa13.02□□□□□ -0.33
HOXA13-201ENST00000222753 ESRGQ1W209 222 aa13.02□□□□□ -0.33
HOXA13-201ENST00000222753 COL4A2P08572 1712 aa13.02□□□□□ -0.33
HOXA13-201ENST00000222753 CFAP54Q96N23 3096 aa13.01□□□□□ -0.33
HOXA13-201ENST00000222753 PMAIP1Q13794 54 aa13.01□□□□□ -0.33
HOXA13-201ENST00000222753 FASNP49327 2511 aaKnown RBP13□□□□□ -0.33
HOXA13-201ENST00000222753 LITAFQ99732 161 aa13□□□□□ -0.33
HOXA13-201ENST00000222753 C16orf95Q9H693 158 aa13□□□□□ -0.33
HOXA13-201ENST00000222753 C10orf25Q5T742 122 aa13□□□□□ -0.33
HOXA13-201ENST00000222753 OXLD1Q5BKU9 147 aa12.99□□□□□ -0.33
HOXA13-201ENST00000222753 A8MTW9 85 aa12.99□□□□□ -0.33
HOXA13-201ENST00000222753 REG3GQ6UW15 175 aa12.99□□□□□ -0.33
HOXA13-201ENST00000222753 LINC00474Q9P2X8 69 aa12.98□□□□□ -0.33
HOXA13-201ENST00000222753 PLAC8L1A1L4L8 177 aa12.97□□□□□ -0.33
HOXA13-201ENST00000222753 SPATA3Q8NHX4 192 aa12.97□□□□□ -0.33
HOXA13-201ENST00000222753 UNC80Q8N2C7 3258 aa12.97□□□□□ -0.33
HOXA13-201ENST00000222753 ACANP16112 2415 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 142.7 ms