RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 IGHV4-28A0A0C4DH34 117 aa10.51□□□□□ -0.73
UBE2D4-201ENST00000222402 IL17DQ8TAD2 202 aa10.5□□□□□ -0.73
UBE2D4-201ENST00000222402 SLPIP03973 132 aa10.5□□□□□ -0.73
UBE2D4-201ENST00000222402 IGHV3OR16-9A0A0B4J2B5 98 aa10.5□□□□□ -0.73
UBE2D4-201ENST00000222402 M0QXV9 152 aa10.5□□□□□ -0.73
UBE2D4-201ENST00000222402 ORMDL1Q9P0S3 153 aa10.5□□□□□ -0.73
UBE2D4-201ENST00000222402 NDUFV3P56181 108 aaKnown RBP10.49□□□□□ -0.73
UBE2D4-201ENST00000222402 NCR3O14931 201 aa10.49□□□□□ -0.73
UBE2D4-201ENST00000222402 C14orf132Q9NPU4 83 aa10.49□□□□□ -0.73
UBE2D4-201ENST00000222402 SPAG11BQ08648 103 aa10.49□□□□□ -0.73
UBE2D4-201ENST00000222402 LAMTOR3Q9UHA4 124 aa10.49□□□□□ -0.73
UBE2D4-201ENST00000222402 LINC00337Q8N6G1 96 aa10.48□□□□□ -0.73
UBE2D4-201ENST00000222402 LINC00526Q96FQ7 95 aa10.48□□□□□ -0.73
UBE2D4-201ENST00000222402 PLAC8L1A1L4L8 177 aa10.48□□□□□ -0.73
UBE2D4-201ENST00000222402 C19orf73Q9NVV2 129 aa10.48□□□□□ -0.73
UBE2D4-201ENST00000222402 FAM236AA0A1B0GUQ0 79 aa10.47□□□□□ -0.73
UBE2D4-201ENST00000222402 FAM236BA0A1B0GV22 79 aa10.47□□□□□ -0.73
UBE2D4-201ENST00000222402 ZNF561-AS1K7EIQ3 104 aa10.47□□□□□ -0.73
UBE2D4-201ENST00000222402 CSNK1G2-AS1Q8NCQ2 148 aa10.47□□□□□ -0.73
UBE2D4-201ENST00000222402 HIST1H4AP62805 103 aaKnown RBP10.46□□□□□ -0.73
UBE2D4-201ENST00000222402 CXCL5P42830 114 aa10.45□□□□□ -0.74
UBE2D4-201ENST00000222402 CD164L2Q6UWJ8 174 aa10.45□□□□□ -0.74
UBE2D4-201ENST00000222402 RPL28P46779 137 aaKnown RBP10.45□□□□□ -0.74
UBE2D4-201ENST00000222402 TMEM126AQ9H061 195 aa10.45□□□□□ -0.74
UBE2D4-201ENST00000222402 SS18L2Q9UHA2 77 aa10.45□□□□□ -0.74
UBE2D4-201ENST00000222402 KRTAP1-1Q07627 177 aa10.44□□□□□ -0.74
UBE2D4-201ENST00000222402 F8P00451 2351 aa10.44□□□□□ -0.74
UBE2D4-201ENST00000222402 PRR3P79522 188 aaKnown RBP10.44□□□□□ -0.74
UBE2D4-201ENST00000222402 SHISA2Q6UWI4 295 aa10.44□□□□□ -0.74
UBE2D4-201ENST00000222402 Q8IZM0 81 aa10.44□□□□□ -0.74
UBE2D4-201ENST00000222402 IGKV3D-7A0A0C4DH55 119 aa10.43□□□□□ -0.74
UBE2D4-201ENST00000222402 C9orf116Q5BN46 136 aaPredicted RBP10.43□□□□□ -0.74
UBE2D4-201ENST00000222402 LINC00643Q86TS7 51 aa10.43□□□□□ -0.74
UBE2D4-201ENST00000222402 A0A087WYN8 130 aa10.43□□□□□ -0.74
UBE2D4-201ENST00000222402 C3orf56Q8N813 242 aa10.43□□□□□ -0.74
UBE2D4-201ENST00000222402 UBR5O95071 2799 aaPredicted RBP10.43□□□□□ -0.74
UBE2D4-201ENST00000222402 MIFP14174 115 aa10.42□□□□□ -0.74
UBE2D4-201ENST00000222402 FAM218AQ96MZ4 157 aa10.42□□□□□ -0.74
UBE2D4-201ENST00000222402 X6R8D5 127 aa10.42□□□□□ -0.74
UBE2D4-201ENST00000222402 CSMD2Q7Z408 3487 aa10.42□□□□□ -0.74
UBE2D4-201ENST00000222402 A0A1B0GUV1 79 aa10.41□□□□□ -0.74
UBE2D4-201ENST00000222402 CUBNO60494 3623 aa10.41□□□□□ -0.74
UBE2D4-201ENST00000222402 FAM240AA0A1B0GVK7 77 aa10.41□□□□□ -0.74
UBE2D4-201ENST00000222402 RPL18AQ02543 176 aaKnown RBP10.4□□□□□ -0.74
UBE2D4-201ENST00000222402 FAM19A3Q7Z5A8 133 aa10.4□□□□□ -0.74
UBE2D4-201ENST00000222402 IGHV4-30-4P0DP06 118 aa10.39□□□□□ -0.75
UBE2D4-201ENST00000222402 C6orf99Q4VX62 202 aa10.39□□□□□ -0.75
UBE2D4-201ENST00000222402 Q8N3U1 123 aa10.39□□□□□ -0.75
UBE2D4-201ENST00000222402 CAMK2N2Q96S95 79 aa10.39□□□□□ -0.75
UBE2D4-201ENST00000222402 C9orf153Q5TBE3 101 aa10.39□□□□□ -0.75
UBE2D4-201ENST00000222402 HIGD2BQ4VC39 106 aa10.38□□□□□ -0.75
UBE2D4-201ENST00000222402 XAGE1AQ9HD64 81 aa10.38□□□□□ -0.75
UBE2D4-201ENST00000222402 IGKV2-28A0A075B6P5 120 aa10.37□□□□□ -0.75
UBE2D4-201ENST00000222402 IGKV2D-28P01615 120 aa10.37□□□□□ -0.75
UBE2D4-201ENST00000222402 CELA1Q9UNI1 258 aa10.37□□□□□ -0.75
UBE2D4-201ENST00000222402 VPS13CQ709C8 3753 aa10.37□□□□□ -0.75
UBE2D4-201ENST00000222402 KRTAP10-3P60369 221 aa10.37□□□□□ -0.75
UBE2D4-201ENST00000222402 UNQ6190/PRO20217Q6UXQ8 127 aa10.37□□□□□ -0.75
UBE2D4-201ENST00000222402 IGKV2D-24A0A075B6R9 120 aa10.37□□□□□ -0.75
UBE2D4-201ENST00000222402 CITED1Q99966 193 aa10.36□□□□□ -0.75
UBE2D4-201ENST00000222402 LELP1Q5T871 98 aa10.36□□□□□ -0.75
UBE2D4-201ENST00000222402 CCDC179H3BU77 68 aa10.35□□□□□ -0.75
UBE2D4-201ENST00000222402 OXLD1Q5BKU9 147 aa10.35□□□□□ -0.75
UBE2D4-201ENST00000222402 SDIM1Q6ZPB5 146 aa10.35□□□□□ -0.75
UBE2D4-201ENST00000222402 Q6Q795 121 aa10.35□□□□□ -0.75
UBE2D4-201ENST00000222402 C1orf43Q9BWL3 253 aa10.35□□□□□ -0.75
UBE2D4-201ENST00000222402 UBL5Q9BZL1 73 aa10.35□□□□□ -0.75
UBE2D4-201ENST00000222402 TMEM256-PLSCR3K7ERE1 68 aa10.34□□□□□ -0.75
UBE2D4-201ENST00000222402 C6orf223Q8N319 242 aa10.34□□□□□ -0.75
UBE2D4-201ENST00000222402 CYSRT1A8MQ03 144 aa10.34□□□□□ -0.75
UBE2D4-201ENST00000222402 JMJD7-PLA2G4BH0Y9G9 81 aa10.33□□□□□ -0.76
UBE2D4-201ENST00000222402 GHRHP01286 108 aa10.32□□□□□ -0.76
UBE2D4-201ENST00000222402 DEFB121Q5J5C9 76 aa10.32□□□□□ -0.76
UBE2D4-201ENST00000222402 HAMPP81172 84 aa10.32□□□□□ -0.76
UBE2D4-201ENST00000222402 RETNQ9HD89 108 aa10.32□□□□□ -0.76
UBE2D4-201ENST00000222402 COX17Q14061 63 aa10.32□□□□□ -0.76
UBE2D4-201ENST00000222402 DSCR8Q96T75 97 aa10.31□□□□□ -0.76
UBE2D4-201ENST00000222402 KPRPQ5T749 579 aaPredicted RBP10.31□□□□□ -0.76
UBE2D4-201ENST00000222402 ZFHX3Q15911 3703 aa10.3□□□□□ -0.76
UBE2D4-201ENST00000222402 SPATA3Q8NHX4 192 aa10.3□□□□□ -0.76
UBE2D4-201ENST00000222402 hADV29S1A0JD25 119 aa10.3□□□□□ -0.76
UBE2D4-201ENST00000222402 NIPBLQ6KC79 2804 aaeCLIP10.29□□□□□ -0.76
UBE2D4-201ENST00000222402 DIRC1Q969H9 104 aa10.29□□□□□ -0.76
UBE2D4-201ENST00000222402 IMUPQ9GZP8 106 aa10.29□□□□□ -0.76
UBE2D4-201ENST00000222402 RBM3P98179 157 aaKnown RBP10.28□□□□□ -0.76
UBE2D4-201ENST00000222402 A0A1B0GX51 115 aa10.28□□□□□ -0.76
UBE2D4-201ENST00000222402 MAST4O15021 2626 aa10.27□□□□□ -0.76
UBE2D4-201ENST00000222402 NKAPP1Q8N9T2 125 aa10.27□□□□□ -0.76
UBE2D4-201ENST00000222402 MRAPQ8TCY5 172 aa10.27□□□□□ -0.76
UBE2D4-201ENST00000222402 Q8N814 137 aa10.27□□□□□ -0.77
UBE2D4-201ENST00000222402 TEP1Q99973 2627 aaKnown RBP10.26□□□□□ -0.77
UBE2D4-201ENST00000222402 C10orf25Q5T742 122 aa10.26□□□□□ -0.77
UBE2D4-201ENST00000222402 LINC00612Q8N6U2 182 aa10.26□□□□□ -0.77
UBE2D4-201ENST00000222402 ATOX1O00244 68 aa10.25□□□□□ -0.77
UBE2D4-201ENST00000222402 LINC01561Q8N1V8 128 aa10.25□□□□□ -0.77
UBE2D4-201ENST00000222402 Q6ZQY7 126 aa10.25□□□□□ -0.77
UBE2D4-201ENST00000222402 Q8NAQ8 132 aa10.25□□□□□ -0.77
UBE2D4-201ENST00000222402 DEFB131BA0A096LNP1 70 aa10.24□□□□□ -0.77
UBE2D4-201ENST00000222402 SMIM20Q8N5G0 67 aa10.24□□□□□ -0.77
UBE2D4-201ENST00000222402 NDUFC2O95298 119 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms