RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 H7C2G1 150 aa11.85□□□□□ -0.51
VRK1-201ENST00000216639 CFAP161Q6P656 301 aa11.85□□□□□ -0.51
VRK1-201ENST00000216639 TRBV20-1A0A075B6N2 111 aa11.84□□□□□ -0.51
VRK1-201ENST00000216639 TRAV8-4A0A0B4J246 113 aa11.84□□□□□ -0.51
VRK1-201ENST00000216639 CXCL5P42830 114 aa11.84□□□□□ -0.51
VRK1-201ENST00000216639 LINC00158P58513 81 aa11.84□□□□□ -0.51
VRK1-201ENST00000216639 CKS1BP61024 79 aa11.84□□□□□ -0.51
VRK1-201ENST00000216639 FOXI1Q12951 378 aa11.84□□□□□ -0.51
VRK1-201ENST00000216639 DNAH3Q8TD57 4116 aa11.84□□□□□ -0.51
VRK1-201ENST00000216639 H3BMG7 143 aa11.83□□□□□ -0.52
VRK1-201ENST00000216639 ESRGQ1W209 222 aa11.83□□□□□ -0.52
VRK1-201ENST00000216639 WFDC10BQ8IUB3 73 aa11.83□□□□□ -0.52
VRK1-201ENST00000216639 COL6A5A8TX70 2615 aa11.83□□□□□ -0.52
VRK1-201ENST00000216639 GAGE12HA6NDE8 117 aa11.83□□□□□ -0.52
VRK1-201ENST00000216639 F8W1H4 67 aa11.83□□□□□ -0.52
VRK1-201ENST00000216639 MIR7-3HGQ8N6C7 128 aa11.83□□□□□ -0.52
VRK1-201ENST00000216639 C15orf53Q8NAA6 179 aa11.83□□□□□ -0.52
VRK1-201ENST00000216639 ENHOQ6UWT2 76 aa11.82□□□□□ -0.52
VRK1-201ENST00000216639 SOSTDC1Q6X4U4 206 aa11.81□□□□□ -0.52
VRK1-201ENST00000216639 UBE2WQ96B02 151 aa11.81□□□□□ -0.52
VRK1-201ENST00000216639 PKD1L1Q8TDX9 2849 aa11.81□□□□□ -0.52
VRK1-201ENST00000216639 TRBV30A0A0K0K1B3 111 aa11.8□□□□□ -0.52
VRK1-201ENST00000216639 PFN2P35080 140 aa11.8□□□□□ -0.52
VRK1-201ENST00000216639 KLK5Q9Y337 293 aaPredicted RBP11.8□□□□□ -0.52
VRK1-201ENST00000216639 COX6CP09669 75 aa11.79□□□□□ -0.52
VRK1-201ENST00000216639 RPL13AP40429 203 aaKnown RBP11.79□□□□□ -0.52
VRK1-201ENST00000216639 KIAA0087Q14695 138 aa11.79□□□□□ -0.52
VRK1-201ENST00000216639 TCL1BO95988 128 aa11.77□□□□□ -0.52
VRK1-201ENST00000216639 LINC01556Q5JQF7 62 aa11.77□□□□□ -0.52
VRK1-201ENST00000216639 C2orf82Q6UX34 121 aa11.77□□□□□ -0.52
VRK1-201ENST00000216639 COX17Q14061 63 aa11.77□□□□□ -0.53
VRK1-201ENST00000216639 SPAG11BQ08648 103 aa11.76□□□□□ -0.53
VRK1-201ENST00000216639 SND1-IT1Q9HBX3 110 aa11.76□□□□□ -0.53
VRK1-201ENST00000216639 ANK2Q01484 3957 aa11.76□□□□□ -0.53
VRK1-201ENST00000216639 TRIAP1O43715 76 aa11.75□□□□□ -0.53
VRK1-201ENST00000216639 TRAV13-2A0A0B4J235 113 aa11.74□□□□□ -0.53
VRK1-201ENST00000216639 CCL18P55774 89 aa11.74□□□□□ -0.53
VRK1-201ENST00000216639 ATXN8Q156A1 80 aa11.74□□□□□ -0.53
VRK1-201ENST00000216639 OCIAD2Q56VL3 154 aa11.74□□□□□ -0.53
VRK1-201ENST00000216639 PRO0461Q9UI25 63 aa11.73□□□□□ -0.53
VRK1-201ENST00000216639 K7ERU9 68 aa11.72□□□□□ -0.53
VRK1-201ENST00000216639 DNAH10OSP0CZ25 163 aa11.72□□□□□ -0.53
VRK1-201ENST00000216639 WFDC2Q14508 124 aa11.72□□□□□ -0.53
VRK1-201ENST00000216639 MUC7Q8TAX7 377 aa11.71□□□□□ -0.54
VRK1-201ENST00000216639 B9D2Q9BPU9 175 aa11.71□□□□□ -0.54
VRK1-201ENST00000216639 C1orf43Q9BWL3 253 aa11.71□□□□□ -0.54
VRK1-201ENST00000216639 MTURNQ8N3F0 131 aa11.69□□□□□ -0.54
VRK1-201ENST00000216639 LINC00588Q9Y4M8 146 aa11.69□□□□□ -0.54
VRK1-201ENST00000216639 C6orf223Q8N319 242 aa11.67□□□□□ -0.54
VRK1-201ENST00000216639 NOTCH1P46531 2555 aa11.66□□□□□ -0.54
VRK1-201ENST00000216639 IGKV2-28A0A075B6P5 120 aa11.66□□□□□ -0.54
VRK1-201ENST00000216639 ZNF561-AS1K7EIQ3 104 aa11.66□□□□□ -0.54
VRK1-201ENST00000216639 IGKV2D-28P01615 120 aa11.66□□□□□ -0.54
VRK1-201ENST00000216639 KRTAP26-1Q6PEX3 210 aa11.66□□□□□ -0.54
VRK1-201ENST00000216639 UNQ6190/PRO20217Q6UXQ8 127 aa11.66□□□□□ -0.54
VRK1-201ENST00000216639 NTN5Q8WTR8 489 aaPredicted RBP11.66□□□□□ -0.54
VRK1-201ENST00000216639 TENM3Q9P273 2699 aa11.66□□□□□ -0.54
VRK1-201ENST00000216639 IGKV2D-24A0A075B6R9 120 aa11.66□□□□□ -0.54
VRK1-201ENST00000216639 GVQW2A0A096LPI5 108 aaPredicted RBP11.66□□□□□ -0.54
VRK1-201ENST00000216639 ETDBQ3ZM63 59 aa11.66□□□□□ -0.54
VRK1-201ENST00000216639 LINC00337Q8N6G1 96 aa11.66□□□□□ -0.54
VRK1-201ENST00000216639 C9JAW5 83 aa11.65□□□□□ -0.54
VRK1-201ENST00000216639 LINC01620Q4KN68 170 aa11.65□□□□□ -0.54
VRK1-201ENST00000216639 NDUFC2O95298 119 aa11.64□□□□□ -0.55
VRK1-201ENST00000216639 C9orf116Q5BN46 136 aaPredicted RBP11.64□□□□□ -0.55
VRK1-201ENST00000216639 LINC00526Q96FQ7 95 aa11.64□□□□□ -0.55
VRK1-201ENST00000216639 LST1O00453 97 aa11.63□□□□□ -0.55
VRK1-201ENST00000216639 SLC25A20O43772 301 aa11.63□□□□□ -0.55
VRK1-201ENST00000216639 RPL28P46779 137 aaKnown RBP11.63□□□□□ -0.55
VRK1-201ENST00000216639 SMCPP49901 116 aaPredicted RBP11.63□□□□□ -0.55
VRK1-201ENST00000216639 C10orf25Q5T742 122 aa11.63□□□□□ -0.55
VRK1-201ENST00000216639 M0QXV9 152 aa11.63□□□□□ -0.55
VRK1-201ENST00000216639 CLEC2BQ92478 149 aa11.63□□□□□ -0.55
VRK1-201ENST00000216639 UPK3BQ9BT76 320 aa11.63□□□□□ -0.55
VRK1-201ENST00000216639 J3QR89 54 aa11.62□□□□□ -0.55
VRK1-201ENST00000216639 CAMK2N2Q96S95 79 aa11.62□□□□□ -0.55
VRK1-201ENST00000216639 F8WDY8 70 aa11.61□□□□□ -0.55
VRK1-201ENST00000216639 NHLRC4P0CG21 123 aaPredicted RBP11.61□□□□□ -0.55
VRK1-201ENST00000216639 KRTAP21-3Q3LHN1 58 aa11.61□□□□□ -0.55
VRK1-201ENST00000216639 HIGD2BQ4VC39 106 aa11.61□□□□□ -0.55
VRK1-201ENST00000216639 OR13C6PQ8NH95 151 aa11.61□□□□□ -0.55
VRK1-201ENST00000216639 C2orf48Q96LS8 159 aa11.61□□□□□ -0.55
VRK1-201ENST00000216639 Q9HAA7 133 aa11.61□□□□□ -0.55
VRK1-201ENST00000216639 TRBV10-2A0A0K0K1G8 114 aa11.6□□□□□ -0.55
VRK1-201ENST00000216639 RMI2Q96E14 147 aa11.6□□□□□ -0.55
VRK1-201ENST00000216639 RNF151Q2KHN1 245 aa11.6□□□□□ -0.55
VRK1-201ENST00000216639 C15orf56Q8N910 161 aa11.6□□□□□ -0.55
VRK1-201ENST00000216639 C6orf48Q9UBA6 75 aa11.6□□□□□ -0.55
VRK1-201ENST00000216639 TEN1Q86WV5 123 aa11.59□□□□□ -0.55
VRK1-201ENST00000216639 ANKRD29Q8N6D5 301 aa11.59□□□□□ -0.55
VRK1-201ENST00000216639 HUWE1Q7Z6Z7 4374 aaKnown RBP11.58□□□□□ -0.56
VRK1-201ENST00000216639 SMIM11BQ8TCY0 68 aa11.58□□□□□ -0.56
VRK1-201ENST00000216639 NBEAL1Q6ZS30 2694 aa11.58□□□□□ -0.56
VRK1-201ENST00000216639 LINC01600Q96MT4 127 aa11.57□□□□□ -0.56
VRK1-201ENST00000216639 MGAM2Q2M2H8 2515 aa11.57□□□□□ -0.56
VRK1-201ENST00000216639 H3BT86 120 aa11.56□□□□□ -0.56
VRK1-201ENST00000216639 H0YGX0 51 aa11.55□□□□□ -0.56
VRK1-201ENST00000216639 TMEM126AQ9H061 195 aa11.55□□□□□ -0.56
VRK1-201ENST00000216639 TRACP01848 142 aa11.55□□□□□ -0.56
VRK1-201ENST00000216639 PPDPFLQ8WWR9 84 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms