RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 FAM236AA0A1B0GUQ0 79 aa9.18□□□□□ -0.94
CTNS-201ENST00000046640 FAM236BA0A1B0GV22 79 aa9.18□□□□□ -0.94
CTNS-201ENST00000046640 GAGE2AQ6NT46 116 aa9.18□□□□□ -0.94
CTNS-201ENST00000046640 ATP5G1P05496 136 aa9.18□□□□□ -0.94
CTNS-201ENST00000046640 X6R8D5 127 aa9.18□□□□□ -0.94
CTNS-201ENST00000046640 FAM240AA0A1B0GVK7 77 aa9.17□□□□□ -0.94
CTNS-201ENST00000046640 FAM222AQ5U5X8 452 aa9.17□□□□□ -0.94
CTNS-201ENST00000046640 LINC00337Q8N6G1 96 aa9.17□□□□□ -0.94
CTNS-201ENST00000046640 TRBV7-7A0A0K0K1E9 115 aa9.16□□□□□ -0.94
CTNS-201ENST00000046640 DEFB121Q5J5C9 76 aa9.16□□□□□ -0.94
CTNS-201ENST00000046640 SND1-IT1Q9HBX3 110 aa9.16□□□□□ -0.94
CTNS-201ENST00000046640 CRPP02741 224 aa9.16□□□□□ -0.94
CTNS-201ENST00000046640 OR13C6PQ8NH95 151 aa9.16□□□□□ -0.94
CTNS-201ENST00000046640 COX7B2Q8TF08 81 aa9.16□□□□□ -0.94
CTNS-201ENST00000046640 PPDPFQ9H3Y8 114 aa9.15□□□□□ -0.94
CTNS-201ENST00000046640 A0A087WYN8 130 aa9.14□□□□□ -0.95
CTNS-201ENST00000046640 XCL1P47992 114 aa9.14□□□□□ -0.95
CTNS-201ENST00000046640 C9orf129Q5T035 196 aaKnown RBP9.14□□□□□ -0.95
CTNS-201ENST00000046640 Q8N3U1 123 aa9.14□□□□□ -0.95
CTNS-201ENST00000046640 HTN3P15516 51 aa9.14□□□□□ -0.95
CTNS-201ENST00000046640 SLPIP03973 132 aa9.14□□□□□ -0.95
CTNS-201ENST00000046640 COPS9Q8WXC6 57 aa9.14□□□□□ -0.95
CTNS-201ENST00000046640 C22orf24Q9Y442 160 aa9.14□□□□□ -0.95
CTNS-201ENST00000046640 IGKV2-28A0A075B6P5 120 aa9.13□□□□□ -0.95
CTNS-201ENST00000046640 PAX4O43316 350 aa9.13□□□□□ -0.95
CTNS-201ENST00000046640 IGKV2D-28P01615 120 aa9.13□□□□□ -0.95
CTNS-201ENST00000046640 F8P00451 2351 aa9.13□□□□□ -0.95
CTNS-201ENST00000046640 SMIM11BQ8TCY0 68 aa9.13□□□□□ -0.95
CTNS-201ENST00000046640 TMEM126AQ9H061 195 aa9.13□□□□□ -0.95
CTNS-201ENST00000046640 FAM19A3Q7Z5A8 133 aa9.12□□□□□ -0.95
CTNS-201ENST00000046640 DNAL4O96015 105 aa9.12□□□□□ -0.95
CTNS-201ENST00000046640 C9orf66Q5T8R8 295 aa9.12□□□□□ -0.95
CTNS-201ENST00000046640 C14orf132Q9NPU4 83 aa9.12□□□□□ -0.95
CTNS-201ENST00000046640 TRACP01848 142 aa9.11□□□□□ -0.95
CTNS-201ENST00000046640 MALP21145 153 aa9.11□□□□□ -0.95
CTNS-201ENST00000046640 KIR2DL5BQ8NHK3 375 aa9.11□□□□□ -0.95
CTNS-201ENST00000046640 IGLV10-54A0A075B6I4 117 aa9.11□□□□□ -0.95
CTNS-201ENST00000046640 CCL18P55774 89 aa9.11□□□□□ -0.95
CTNS-201ENST00000046640 TRAV13-2A0A0B4J235 113 aa9.1□□□□□ -0.95
CTNS-201ENST00000046640 IGHV3OR16-9A0A0B4J2B5 98 aa9.1□□□□□ -0.95
CTNS-201ENST00000046640 PRO0255Q9UI72 69 aa9.1□□□□□ -0.95
CTNS-201ENST00000046640 IGHV4-28A0A0C4DH34 117 aa9.1□□□□□ -0.95
CTNS-201ENST00000046640 LINC00959A0A1B0GUT2 108 aa9.1□□□□□ -0.95
CTNS-201ENST00000046640 C9orf153Q5TBE3 101 aa9.1□□□□□ -0.95
CTNS-201ENST00000046640 CELA1Q9UNI1 258 aa9.1□□□□□ -0.95
CTNS-201ENST00000046640 LECT2O14960 151 aa9.1□□□□□ -0.95
CTNS-201ENST00000046640 PRR3P79522 188 aaKnown RBP9.09□□□□□ -0.95
CTNS-201ENST00000046640 C6orf226Q5I0X4 101 aa9.09□□□□□ -0.95
CTNS-201ENST00000046640 IGKV3D-7A0A0C4DH55 119 aa9.08□□□□□ -0.96
CTNS-201ENST00000046640 ACYP1P07311 99 aa9.08□□□□□ -0.96
CTNS-201ENST00000046640 SDIM1Q6ZPB5 146 aa9.08□□□□□ -0.96
CTNS-201ENST00000046640 NCR3O14931 201 aa9.08□□□□□ -0.96
CTNS-201ENST00000046640 RPL28P46779 137 aaKnown RBP9.08□□□□□ -0.96
CTNS-201ENST00000046640 LINC00643Q86TS7 51 aa9.08□□□□□ -0.96
CTNS-201ENST00000046640 IMUPQ9GZP8 106 aa9.08□□□□□ -0.96
CTNS-201ENST00000046640 STAB1Q9NY15 2570 aa9.08□□□□□ -0.96
CTNS-201ENST00000046640 DAD1P61803 113 aa9.07□□□□□ -0.96
CTNS-201ENST00000046640 LINC00269Q8N2A0 174 aa9.07□□□□□ -0.96
CTNS-201ENST00000046640 C3orf22Q8N5N4 141 aa9.07□□□□□ -0.96
CTNS-201ENST00000046640 LINC00612Q8N6U2 182 aa9.07□□□□□ -0.96
CTNS-201ENST00000046640 KLK5Q9Y337 293 aaPredicted RBP9.07□□□□□ -0.96
CTNS-201ENST00000046640 PKD1L1Q8TDX9 2849 aa9.06□□□□□ -0.96
CTNS-201ENST00000046640 LOC107984640A0A0U1RRK4 108 aa9.06□□□□□ -0.96
CTNS-201ENST00000046640 A0A087WZ39 114 aa9.06□□□□□ -0.96
CTNS-201ENST00000046640 SMIM9A6NGZ8 99 aa9.05□□□□□ -0.96
CTNS-201ENST00000046640 ANGP03950 147 aaKnown RBP9.05□□□□□ -0.96
CTNS-201ENST00000046640 INAFM2P0DMQ5 153 aa9.04□□□□□ -0.96
CTNS-201ENST00000046640 IGHV4-30-4P0DP06 118 aa9.04□□□□□ -0.96
CTNS-201ENST00000046640 APOC4P55056 127 aa9.04□□□□□ -0.96
CTNS-201ENST00000046640 SS18Q15532 418 aa9.04□□□□□ -0.96
CTNS-201ENST00000046640 OXLD1Q5BKU9 147 aa9.04□□□□□ -0.96
CTNS-201ENST00000046640 UQCRQO14949 82 aa9.04□□□□□ -0.96
CTNS-201ENST00000046640 LYRM9A8MSI8 78 aa9.03□□□□□ -0.96
CTNS-201ENST00000046640 A0A087WVE0 104 aa9.02□□□□□ -0.96
CTNS-201ENST00000046640 LINC00526Q96FQ7 95 aa9.02□□□□□ -0.96
CTNS-201ENST00000046640 MAST4O15021 2626 aa9.02□□□□□ -0.97
CTNS-201ENST00000046640 Q8NAQ8 132 aa9.02□□□□□ -0.97
CTNS-201ENST00000046640 RETNQ9HD89 108 aa9.02□□□□□ -0.97
CTNS-201ENST00000046640 C9orf116Q5BN46 136 aaPredicted RBP9.01□□□□□ -0.97
CTNS-201ENST00000046640 LINC00846Q9NV44 126 aa9.01□□□□□ -0.97
CTNS-201ENST00000046640 IBA57-AS1B1ANH7 110 aa9.01□□□□□ -0.97
CTNS-201ENST00000046640 FBN1P35555 2871 aaKnown RBP9□□□□□ -0.97
CTNS-201ENST00000046640 NOTCH1P46531 2555 aa9□□□□□ -0.97
CTNS-201ENST00000046640 A0A1B0GUV1 79 aa9□□□□□ -0.97
CTNS-201ENST00000046640 REG3AQ06141 175 aa8.99□□□□□ -0.97
CTNS-201ENST00000046640 CHCHD10Q8WYQ3 142 aaPredicted RBP8.99□□□□□ -0.97
CTNS-201ENST00000046640 H0YGX0 51 aa8.98□□□□□ -0.97
CTNS-201ENST00000046640 COX7CP15954 63 aa8.98□□□□□ -0.97
CTNS-201ENST00000046640 SPART-AS1P0CW21 52 aa8.98□□□□□ -0.97
CTNS-201ENST00000046640 CXCL5P42830 114 aa8.98□□□□□ -0.97
CTNS-201ENST00000046640 WFDC9Q8NEX5 89 aa8.98□□□□□ -0.97
CTNS-201ENST00000046640 C2orf48Q96LS8 159 aa8.98□□□□□ -0.97
CTNS-201ENST00000046640 TENM3Q9P273 2699 aa8.97□□□□□ -0.97
CTNS-201ENST00000046640 hADV29S1A0JD25 119 aa8.97□□□□□ -0.97
CTNS-201ENST00000046640 HIST1H4AP62805 103 aaKnown RBP8.97□□□□□ -0.97
CTNS-201ENST00000046640 KLK12Q9UKR0 248 aa8.97□□□□□ -0.97
CTNS-201ENST00000046640 MIFP14174 115 aa8.96□□□□□ -0.97
CTNS-201ENST00000046640 FAM19A5Q7Z5A7 132 aaPredicted RBP8.96□□□□□ -0.98
CTNS-201ENST00000046640 C6orf223Q8N319 242 aa8.96□□□□□ -0.98
CTNS-201ENST00000046640 CYSTM1Q9H1C7 97 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms