RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Gm21874J3QNZ6 232 aa5.07□□□□□ -1.6
Lig4-202ENSMUST00000170033 Ascl2O35885 263 aa5.07□□□□□ -1.6
Lig4-202ENSMUST00000170033 P01724 129 aa5.07□□□□□ -1.6
Lig4-202ENSMUST00000170033 P18530 117 aa5.07□□□□□ -1.6
Lig4-202ENSMUST00000170033 Bmp5P49003 452 aa5.07□□□□□ -1.6
Lig4-202ENSMUST00000170033 Zfp72Q0VFY0 435 aa5.07□□□□□ -1.6
Lig4-202ENSMUST00000170033 Olfr1356Q7TQU8 320 aa5.07□□□□□ -1.6
Lig4-202ENSMUST00000170033 Ttc9cQ810A3 171 aa5.07□□□□□ -1.6
Lig4-202ENSMUST00000170033 Klk1b27Q9JM71 263 aa5.07□□□□□ -1.6
Lig4-202ENSMUST00000170033 ApomQ9Z1R3 190 aa5.07□□□□□ -1.6
Lig4-202ENSMUST00000170033 Gm36368A0A1D5RLK8 91 aa5.06□□□□□ -1.6
Lig4-202ENSMUST00000170033 Cox8cA6H666 72 aa5.06□□□□□ -1.6
Lig4-202ENSMUST00000170033 Gm6970F7DCP6 221 aa5.06□□□□□ -1.6
Lig4-202ENSMUST00000170033 Ren2P00796 401 aa5.06□□□□□ -1.6
Lig4-202ENSMUST00000170033 Sub1P11031 127 aaKnown RBP5.06□□□□□ -1.6
Lig4-202ENSMUST00000170033 Defa4P28311 92 aa5.06□□□□□ -1.6
Lig4-202ENSMUST00000170033 ErhP84089 104 aa5.06□□□□□ -1.6
Lig4-202ENSMUST00000170033 Gfra1P97785 468 aa5.06□□□□□ -1.6
Lig4-202ENSMUST00000170033 Trav6-2Q5R1I4 113 aa5.06□□□□□ -1.6
Lig4-202ENSMUST00000170033 Gm10334Q792Y8 246 aa5.06□□□□□ -1.6
Lig4-202ENSMUST00000170033 Olfr1437Q7TQR7 312 aa5.06□□□□□ -1.6
Lig4-202ENSMUST00000170033 Olfr553Q7TRS6 326 aa5.06□□□□□ -1.6
Lig4-202ENSMUST00000170033 Sox21Q811W0 276 aa5.06□□□□□ -1.6
Lig4-202ENSMUST00000170033 Tmem140Q8BGY5 185 aa5.06□□□□□ -1.6
Lig4-202ENSMUST00000170033 Cysltr1Q99JA4 352 aa5.06□□□□□ -1.6
Lig4-202ENSMUST00000170033 Chchd1Q9CQA6 118 aa5.06□□□□□ -1.6
Lig4-202ENSMUST00000170033 Erg28Q9ERY9 140 aa5.06□□□□□ -1.6
Lig4-202ENSMUST00000170033 Pxmp4Q9JJW0 212 aa5.06□□□□□ -1.6
Lig4-202ENSMUST00000170033 Dolpp1Q9JMF7 238 aa5.06□□□□□ -1.6
Lig4-202ENSMUST00000170033 Med12A2AGH6 2190 aa5.06□□□□□ -1.6
Lig4-202ENSMUST00000170033 1520401A03RikA0A0J9YVH6 598 aa5.06□□□□□ -1.6
Lig4-202ENSMUST00000170033 Zfp931A2AHM2 298 aa5.06□□□□□ -1.6
Lig4-202ENSMUST00000170033 Klf12O35738 402 aa5.06□□□□□ -1.6
Lig4-202ENSMUST00000170033 P18525 117 aa5.06□□□□□ -1.6
Lig4-202ENSMUST00000170033 BsgP18572 389 aaKnown RBP5.06□□□□□ -1.6
Lig4-202ENSMUST00000170033 Gm10842Q3U587 122 aa5.06□□□□□ -1.6
Lig4-202ENSMUST00000170033 Tbr1Q64336 681 aa5.06□□□□□ -1.6
Lig4-202ENSMUST00000170033 Prss3Q792Z0 246 aaKnown RBP5.06□□□□□ -1.6
Lig4-202ENSMUST00000170033 Rpl24Q8BP67 157 aaKnown RBP5.06□□□□□ -1.6
Lig4-202ENSMUST00000170033 Slc25a48Q8BW66 306 aa5.06□□□□□ -1.6
Lig4-202ENSMUST00000170033 Olfr477Q8VGI6 310 aa5.06□□□□□ -1.6
Lig4-202ENSMUST00000170033 Cisd1Q91WS0 108 aaKnown RBP5.06□□□□□ -1.6
Lig4-202ENSMUST00000170033 Rpp25lQ99JH1 163 aa5.06□□□□□ -1.6
Lig4-202ENSMUST00000170033 VsirQ9D659 308 aa5.06□□□□□ -1.6
Lig4-202ENSMUST00000170033 Mrps11Q9DCA2 191 aaKnown RBP5.06□□□□□ -1.6
Lig4-202ENSMUST00000170033 Dnajb12Q9QYI4 376 aaKnown RBP5.06□□□□□ -1.6
Lig4-202ENSMUST00000170033 Ighv1-39A0A075B5V5 117 aa5.06□□□□□ -1.6
Lig4-202ENSMUST00000170033 Gm6812B1AXU1 112 aa5.06□□□□□ -1.6
Lig4-202ENSMUST00000170033 1700020N15RikL7MTX3 112 aa5.06□□□□□ -1.6
Lig4-202ENSMUST00000170033 Ca2P00920 260 aaKnown RBP5.06□□□□□ -1.6
Lig4-202ENSMUST00000170033 P01723 117 aa5.06□□□□□ -1.6
Lig4-202ENSMUST00000170033 Defa13P50711 93 aa5.06□□□□□ -1.6
Lig4-202ENSMUST00000170033 AmelxP63277 210 aa5.06□□□□□ -1.6
Lig4-202ENSMUST00000170033 Wnt10aP70701 417 aa5.06□□□□□ -1.6
Lig4-202ENSMUST00000170033 Asphd1Q2TA57 360 aa5.06□□□□□ -1.6
Lig4-202ENSMUST00000170033 Crip3Q6Q6R3 243 aa5.06□□□□□ -1.6
Lig4-202ENSMUST00000170033 Olfr1183Q8VFF8 303 aa5.06□□□□□ -1.6
Lig4-202ENSMUST00000170033 Mrpl3Q99N95 348 aa5.06□□□□□ -1.6
Lig4-202ENSMUST00000170033 Fam103a1Q9CQY2 119 aaKnown RBP5.06□□□□□ -1.6
Lig4-202ENSMUST00000170033 Ighv1-4A0A075B5T4 117 aa5.05□□□□□ -1.6
Lig4-202ENSMUST00000170033 Trbv14A0A140T8L9 115 aa5.05□□□□□ -1.6
Lig4-202ENSMUST00000170033 Gm6993A0A1W2P738 69 aa5.05□□□□□ -1.6
Lig4-202ENSMUST00000170033 Gm21060J3KMU4 56 aa5.05□□□□□ -1.6
Lig4-202ENSMUST00000170033 Tnfaip6O08859 275 aa5.05□□□□□ -1.6
Lig4-202ENSMUST00000170033 P18526 117 aa5.05□□□□□ -1.6
Lig4-202ENSMUST00000170033 Hist1h1tQ07133 208 aa5.05□□□□□ -1.6
Lig4-202ENSMUST00000170033 Fam173aQ501J2 229 aa5.05□□□□□ -1.6
Lig4-202ENSMUST00000170033 Olfr1381Q7TQT4 311 aa5.05□□□□□ -1.6
Lig4-202ENSMUST00000170033 Olfr1380Q7TQT5 311 aa5.05□□□□□ -1.6
Lig4-202ENSMUST00000170033 C1qtnf5Q8K479 243 aa5.05□□□□□ -1.6
Lig4-202ENSMUST00000170033 AamdcQ8R0P4 122 aa5.05□□□□□ -1.6
Lig4-202ENSMUST00000170033 OtosQ8R448 89 aa5.05□□□□□ -1.6
Lig4-202ENSMUST00000170033 Olfr1402Q8VET1 320 aa5.05□□□□□ -1.6
Lig4-202ENSMUST00000170033 Q9CQM1 111 aa5.05□□□□□ -1.6
Lig4-202ENSMUST00000170033 Ammecr1Q9JHT5 344 aaKnown RBP5.05□□□□□ -1.6
Lig4-202ENSMUST00000170033 Cep290Q6A078 2472 aa5.05□□□□□ -1.6
Lig4-202ENSMUST00000170033 CntrlA2AL36 2334 aa5.05□□□□□ -1.6
Lig4-202ENSMUST00000170033 Olfr1369-ps1A0A140T8K7 317 aa5.05□□□□□ -1.6
Lig4-202ENSMUST00000170033 Gm5093E9PZB3 174 aa5.05□□□□□ -1.6
Lig4-202ENSMUST00000170033 BC107364E9Q5A2 140 aa5.05□□□□□ -1.6
Lig4-202ENSMUST00000170033 Rpl27aP14115 148 aaKnown RBP5.05□□□□□ -1.6
Lig4-202ENSMUST00000170033 Rps20P60867 119 aaKnown RBP5.05□□□□□ -1.6
Lig4-202ENSMUST00000170033 Rpl31P62900 125 aaKnown RBP5.05□□□□□ -1.6
Lig4-202ENSMUST00000170033 Gm21370Q3T9V6 190 aa5.05□□□□□ -1.6
Lig4-202ENSMUST00000170033 Vmn1r195Q5SVD6 316 aa5.05□□□□□ -1.6
Lig4-202ENSMUST00000170033 Olfr263Q7TQT8 317 aa5.05□□□□□ -1.6
Lig4-202ENSMUST00000170033 Fam78bQ8BQN5 261 aa5.05□□□□□ -1.6
Lig4-202ENSMUST00000170033 C1qtnf4Q8R066 326 aa5.05□□□□□ -1.6
Lig4-202ENSMUST00000170033 Vstm2aQ8R0A6 236 aa5.05□□□□□ -1.6
Lig4-202ENSMUST00000170033 Fgfrl1Q91V87 529 aa5.05□□□□□ -1.6
Lig4-202ENSMUST00000170033 Cox20Q9D7J4 117 aa5.05□□□□□ -1.6
Lig4-202ENSMUST00000170033 MNCb-2875Q9DCB3 74 aa5.05□□□□□ -1.6
Lig4-202ENSMUST00000170033 Npc2Q9Z0J0 149 aa5.05□□□□□ -1.6
Lig4-202ENSMUST00000170033 Usf3B2RUQ2 2221 aa5.04□□□□□ -1.6
Lig4-202ENSMUST00000170033 A0A1L1SR50 188 aa5.04□□□□□ -1.6
Lig4-202ENSMUST00000170033 Gm3512L7N206 146 aa5.04□□□□□ -1.6
Lig4-202ENSMUST00000170033 Fxyd5P97808 178 aa5.04□□□□□ -1.6
Lig4-202ENSMUST00000170033 Oosp2Q4FZG8 168 aa5.04□□□□□ -1.6
Lig4-202ENSMUST00000170033 MiaQ61865 130 aa5.04□□□□□ -1.6
Lig4-202ENSMUST00000170033 Gm10277Q6R5C6 214 aa5.04□□□□□ -1.6
Retrieved 100 of 22,080 RNA–protein pairs in 56.9 ms