RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 C2orf88Q9BSF0 95 aa6.33□□□□□ -1.4
PHGDH-228ENST00000641847 VCX2Q9H322 139 aa6.33□□□□□ -1.4
PHGDH-228ENST00000641847 KLK12Q9UKR0 248 aa6.33□□□□□ -1.4
PHGDH-228ENST00000641847 NBDYA0A0U1RRE5 68 aa6.32□□□□□ -1.4
PHGDH-228ENST00000641847 H0Y8G0 127 aa6.32□□□□□ -1.4
PHGDH-228ENST00000641847 CRPP02741 224 aa6.32□□□□□ -1.4
PHGDH-228ENST00000641847 PRSS1P07477 247 aa6.32□□□□□ -1.4
PHGDH-228ENST00000641847 KRTDAPP60985 99 aa6.32□□□□□ -1.4
PHGDH-228ENST00000641847 LINC00269Q8N2A0 174 aa6.32□□□□□ -1.4
PHGDH-228ENST00000641847 C10orf126Q8N4M7 172 aa6.32□□□□□ -1.4
PHGDH-228ENST00000641847 AMELXQ99217 191 aa6.32□□□□□ -1.4
PHGDH-228ENST00000641847 MAP1LC3CQ9BXW4 147 aa6.32□□□□□ -1.4
PHGDH-228ENST00000641847 HMCN2Q8NDA2 5059 aa6.31□□□□□ -1.4
PHGDH-228ENST00000641847 TRAV9-2A0A087WT02 112 aa6.31□□□□□ -1.4
PHGDH-228ENST00000641847 REG3AQ06141 175 aa6.31□□□□□ -1.4
PHGDH-228ENST00000641847 PMVKQ15126 192 aa6.31□□□□□ -1.4
PHGDH-228ENST00000641847 TTC32Q5I0X7 151 aa6.31□□□□□ -1.4
PHGDH-228ENST00000641847 Q5VSD8 79 aa6.31□□□□□ -1.4
PHGDH-228ENST00000641847 UBE2WQ96B02 151 aa6.31□□□□□ -1.4
PHGDH-228ENST00000641847 KRTAP1-5Q9BYS1 174 aa6.31□□□□□ -1.4
PHGDH-228ENST00000641847 TRAV13-1A0A0B4J241 112 aa6.3□□□□□ -1.4
PHGDH-228ENST00000641847 TRAV12-1A0A0B4J245 112 aa6.3□□□□□ -1.4
PHGDH-228ENST00000641847 IBA57-AS1B1ANH7 110 aa6.3□□□□□ -1.4
PHGDH-228ENST00000641847 SYS1-DBNDD2H3BUS1 97 aa6.3□□□□□ -1.4
PHGDH-228ENST00000641847 C3orf79P0CE67 100 aa6.3□□□□□ -1.4
PHGDH-228ENST00000641847 ENHOQ6UWT2 76 aa6.3□□□□□ -1.4
PHGDH-228ENST00000641847 CST9LQ9H4G1 147 aa6.3□□□□□ -1.4
PHGDH-228ENST00000641847 PRR34Q9NV39 138 aa6.3□□□□□ -1.4
PHGDH-228ENST00000641847 FLG2Q5D862 2391 aaPredicted RBP6.3□□□□□ -1.4
PHGDH-228ENST00000641847 LINC00959A0A1B0GUT2 108 aa6.29□□□□□ -1.4
PHGDH-228ENST00000641847 K7EP13 123 aa6.29□□□□□ -1.4
PHGDH-228ENST00000641847 UBE2D1P51668 147 aa6.29□□□□□ -1.4
PHGDH-228ENST00000641847 OR10D4PQ8NGN7 298 aa6.29□□□□□ -1.4
PHGDH-228ENST00000641847 Q9HAA7 133 aa6.29□□□□□ -1.4
PHGDH-228ENST00000641847 CHTOPQ9Y3Y2 248 aaKnown RBP6.29□□□□□ -1.4
PHGDH-228ENST00000641847 IGLV10-54A0A075B6I4 117 aa6.28□□□□□ -1.4
PHGDH-228ENST00000641847 FAM229AH3BQW9 127 aa6.28□□□□□ -1.4
PHGDH-228ENST00000641847 ODF1Q14990 250 aa6.28□□□□□ -1.4
PHGDH-228ENST00000641847 SS18Q15532 418 aa6.28□□□□□ -1.4
PHGDH-228ENST00000641847 MIAQ16674 131 aa6.28□□□□□ -1.4
PHGDH-228ENST00000641847 SERTAD4-AS1Q5TG53 156 aa6.28□□□□□ -1.4
PHGDH-228ENST00000641847 PET117Q6UWS5 81 aa6.28□□□□□ -1.4
PHGDH-228ENST00000641847 PMCHL2Q9BQD1 86 aa6.28□□□□□ -1.4
PHGDH-228ENST00000641847 MRPL35Q9NZE8 188 aaKnown RBP6.28□□□□□ -1.4
PHGDH-228ENST00000641847 IGLV4-69A0A075B6H9 119 aa6.27□□□□□ -1.41
PHGDH-228ENST00000641847 TRAV8-3A0A0A6YYJ7 113 aa6.27□□□□□ -1.41
PHGDH-228ENST00000641847 C20orf202A1L168 122 aa6.27□□□□□ -1.41
PHGDH-228ENST00000641847 F8VRH5 84 aa6.27□□□□□ -1.41
PHGDH-228ENST00000641847 IGLC3P0DOY3 106 aa6.27□□□□□ -1.41
PHGDH-228ENST00000641847 XCL1P47992 114 aa6.27□□□□□ -1.41
PHGDH-228ENST00000641847 CHCHD10Q8WYQ3 142 aaPredicted RBP6.27□□□□□ -1.41
PHGDH-228ENST00000641847 CHAC1Q9BUX1 264 aa6.27□□□□□ -1.41
PHGDH-228ENST00000641847 C1orf43Q9BWL3 253 aa6.27□□□□□ -1.41
PHGDH-228ENST00000641847 IGKV2D-24A0A075B6R9 120 aa6.26□□□□□ -1.41
PHGDH-228ENST00000641847 TRAV8-4A0A0B4J246 113 aa6.26□□□□□ -1.41
PHGDH-228ENST00000641847 A0A0J9YXV3 536 aa6.26□□□□□ -1.41
PHGDH-228ENST00000641847 TINCRA0A1B0GVN0 87 aa6.26□□□□□ -1.41
PHGDH-228ENST00000641847 CCL25O15444 150 aa6.26□□□□□ -1.41
PHGDH-228ENST00000641847 KRTAP10-2P60368 255 aa6.26□□□□□ -1.41
PHGDH-228ENST00000641847 LINC00242Q5T6M2 205 aa6.26□□□□□ -1.41
PHGDH-228ENST00000641847 LINC01545Q5VT33 79 aa6.26□□□□□ -1.41
PHGDH-228ENST00000641847 FAM19A3Q7Z5A8 133 aa6.26□□□□□ -1.41
PHGDH-228ENST00000641847 RMI2Q96E14 147 aa6.26□□□□□ -1.41
PHGDH-228ENST00000641847 GEMIN7Q9H840 131 aaKnown RBP6.26□□□□□ -1.41
PHGDH-228ENST00000641847 GAGE12HA6NDE8 117 aa6.25□□□□□ -1.41
PHGDH-228ENST00000641847 DPM2O94777 84 aa6.25□□□□□ -1.41
PHGDH-228ENST00000641847 AKR1D1P51857 326 aa6.25□□□□□ -1.41
PHGDH-228ENST00000641847 HERVK_113P63121 156 aa6.25□□□□□ -1.41
PHGDH-228ENST00000641847 SEC11AP67812 179 aa6.25□□□□□ -1.41
PHGDH-228ENST00000641847 C11orf86A6NJI1 115 aa6.24□□□□□ -1.41
PHGDH-228ENST00000641847 IGKCP01834 107 aa6.24□□□□□ -1.41
PHGDH-228ENST00000641847 ZNF22P17026 224 aaPredicted RBP6.24□□□□□ -1.41
PHGDH-228ENST00000641847 PLNP26678 52 aa6.24□□□□□ -1.41
PHGDH-228ENST00000641847 COX6A2Q02221 97 aa6.24□□□□□ -1.41
PHGDH-228ENST00000641847 FOXI1Q12951 378 aa6.24□□□□□ -1.41
PHGDH-228ENST00000641847 CD164L2Q6UWJ8 174 aa6.24□□□□□ -1.41
PHGDH-228ENST00000641847 NFE4Q86UQ8 179 aa6.24□□□□□ -1.41
PHGDH-228ENST00000641847 LINC00469Q8N7U9 141 aa6.24□□□□□ -1.41
PHGDH-228ENST00000641847 IGLV5-45A0A087WSX0 123 aa6.23□□□□□ -1.41
PHGDH-228ENST00000641847 LOC105371267A0A1B0GV96 52 aa6.23□□□□□ -1.41
PHGDH-228ENST00000641847 SCGB1D1O95968 90 aa6.23□□□□□ -1.41
PHGDH-228ENST00000641847 CDPF1Q6NVV7 123 aa6.23□□□□□ -1.41
PHGDH-228ENST00000641847 KRTAP26-1Q6PEX3 210 aa6.23□□□□□ -1.41
PHGDH-228ENST00000641847 ATOH7Q8N100 152 aa6.23□□□□□ -1.41
PHGDH-228ENST00000641847 TM2D2Q9BX73 214 aa6.23□□□□□ -1.41
PHGDH-228ENST00000641847 CDKN2A-AS1Q9UH64 79 aa6.23□□□□□ -1.41
PHGDH-228ENST00000641847 IGHV3OR16-9A0A0B4J2B5 98 aa6.22□□□□□ -1.41
PHGDH-228ENST00000641847 H3BRM9 83 aa6.22□□□□□ -1.41
PHGDH-228ENST00000641847 COX7A2LO14548 114 aa6.22□□□□□ -1.41
PHGDH-228ENST00000641847 JOSD1Q15040 202 aaPredicted RBP6.22□□□□□ -1.41
PHGDH-228ENST00000641847 TMEM170BQ5T4T1 132 aa6.22□□□□□ -1.41
PHGDH-228ENST00000641847 C5orf38Q86SI9 138 aa6.22□□□□□ -1.41
PHGDH-228ENST00000641847 COX11Q9Y6N1 276 aa6.22□□□□□ -1.41
PHGDH-228ENST00000641847 A0A087WZ39 114 aa6.21□□□□□ -1.42
PHGDH-228ENST00000641847 PSCAO43653 123 aa6.21□□□□□ -1.42
PHGDH-228ENST00000641847 SPINK8P0C7L1 97 aa6.21□□□□□ -1.42
PHGDH-228ENST00000641847 SMCPP49901 116 aaPredicted RBP6.21□□□□□ -1.42
PHGDH-228ENST00000641847 XGP55808 180 aa6.21□□□□□ -1.42
PHGDH-228ENST00000641847 TMEM223A0PJW6 202 aa6.2□□□□□ -1.42
PHGDH-228ENST00000641847 MALP21145 153 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms