RNA–Protein interactions for RNA: ENST00000641476.1

SRRT-219, Transcript of serrate, RNA effector molecule, humanhuman

Gene SRRT, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-219ENST00000641476 CDC42SE2Q9NRR3 84 aa9.18□□□□□ -0.94
SRRT-219ENST00000641476 TRAPPC1Q9Y5R8 145 aa9.18□□□□□ -0.94
SRRT-219ENST00000641476 SUMO2P61956 95 aaKnown RBP9.17□□□□□ -0.94
SRRT-219ENST00000641476 PRR3P79522 188 aaKnown RBP9.17□□□□□ -0.94
SRRT-219ENST00000641476 FABP9Q0Z7S8 132 aa9.17□□□□□ -0.94
SRRT-219ENST00000641476 SS18Q15532 418 aa9.17□□□□□ -0.94
SRRT-219ENST00000641476 CD164L2Q6UWJ8 174 aa9.17□□□□□ -0.94
SRRT-219ENST00000641476 ZNF664Q8N3J9 261 aa9.17□□□□□ -0.94
SRRT-219ENST00000641476 FCER1GP30273 86 aa9.16□□□□□ -0.94
SRRT-219ENST00000641476 ODF1Q14990 250 aa9.16□□□□□ -0.94
SRRT-219ENST00000641476 C20orf78Q9BR46 151 aa9.16□□□□□ -0.94
SRRT-219ENST00000641476 PKIGQ9Y2B9 76 aa9.16□□□□□ -0.94
SRRT-219ENST00000641476 ALKBH7Q9BT30 221 aaPredicted RBP9.15□□□□□ -0.94
SRRT-219ENST00000641476 LAMTOR2Q9Y2Q5 125 aa9.15□□□□□ -0.94
SRRT-219ENST00000641476 UBE2D4Q9Y2X8 147 aa9.15□□□□□ -0.94
SRRT-219ENST00000641476 PRSS47A8MTI9 375 aa9.14□□□□□ -0.95
SRRT-219ENST00000641476 VCYO14598 125 aa9.14□□□□□ -0.95
SRRT-219ENST00000641476 RPL32P62910 135 aaKnown RBP9.14□□□□□ -0.95
SRRT-219ENST00000641476 RNASE13Q5GAN3 156 aaKnown RBP9.14□□□□□ -0.95
SRRT-219ENST00000641476 Q6ZUT4 128 aa9.14□□□□□ -0.95
SRRT-219ENST00000641476 SMIM2Q9BVW6 85 aa9.14□□□□□ -0.95
SRRT-219ENST00000641476 LINC00474Q9P2X8 69 aa9.14□□□□□ -0.95
SRRT-219ENST00000641476 LOC389332A0A1B0GUA5 103 aa9.13□□□□□ -0.95
SRRT-219ENST00000641476 ZNF561-AS1K7EIQ3 104 aa9.13□□□□□ -0.95
SRRT-219ENST00000641476 RAB5AP20339 215 aa9.13□□□□□ -0.95
SRRT-219ENST00000641476 SYCNQ0VAF6 134 aa9.13□□□□□ -0.95
SRRT-219ENST00000641476 KIR2DL4Q99706 377 aa9.13□□□□□ -0.95
SRRT-219ENST00000641476 CSDC2Q9Y534 153 aaKnown RBP9.13□□□□□ -0.95
SRRT-219ENST00000641476 COX7A2LO14548 114 aa9.12□□□□□ -0.95
SRRT-219ENST00000641476 SMAGPQ0VAQ4 97 aa9.12□□□□□ -0.95
SRRT-219ENST00000641476 MAP1LC3AQ9H492 121 aa9.12□□□□□ -0.95
SRRT-219ENST00000641476 IGLV4-69A0A075B6H9 119 aa9.11□□□□□ -0.95
SRRT-219ENST00000641476 TRAV13-1A0A0B4J241 112 aa9.11□□□□□ -0.95
SRRT-219ENST00000641476 C1orf196B1AJZ1 125 aa9.11□□□□□ -0.95
SRRT-219ENST00000641476 TRGC2P03986 189 aa9.11□□□□□ -0.95
SRRT-219ENST00000641476 MALP21145 153 aa9.11□□□□□ -0.95
SRRT-219ENST00000641476 TCAPO15273 167 aa9.1□□□□□ -0.95
SRRT-219ENST00000641476 IFI27P40305 119 aaPredicted RBP9.1□□□□□ -0.95
SRRT-219ENST00000641476 PTTG1IPP53801 180 aa9.1□□□□□ -0.95
SRRT-219ENST00000641476 Q8N8P6 123 aa9.1□□□□□ -0.95
SRRT-219ENST00000641476 C18orf32Q8TCD1 76 aa9.09□□□□□ -0.95
SRRT-219ENST00000641476 TIMM21Q9BVV7 248 aa9.09□□□□□ -0.95
SRRT-219ENST00000641476 LOC107984640A0A0U1RRK4 108 aa9.08□□□□□ -0.96
SRRT-219ENST00000641476 RPL39P62891 51 aaKnown RBP9.08□□□□□ -0.96
SRRT-219ENST00000641476 TMEM18Q96B42 140 aa9.08□□□□□ -0.96
SRRT-219ENST00000641476 CAMK2N2Q96S95 79 aa9.08□□□□□ -0.96
SRRT-219ENST00000641476 APOMO95445 188 aa9.07□□□□□ -0.96
SRRT-219ENST00000641476 SPAG11BQ08648 103 aa9.07□□□□□ -0.96
SRRT-219ENST00000641476 GAGE2BQ13066 116 aa9.07□□□□□ -0.96
SRRT-219ENST00000641476 C5orf38Q86SI9 138 aa9.07□□□□□ -0.96
SRRT-219ENST00000641476 NXT2Q9NPJ8 142 aaKnown RBP9.07□□□□□ -0.96
SRRT-219ENST00000641476 URB1-AS1Q96HZ7 61 aa9.06□□□□□ -0.96
SRRT-219ENST00000641476 C2orf48Q96LS8 159 aa9.06□□□□□ -0.96
SRRT-219ENST00000641476 LINC01600Q96MT4 127 aa9.06□□□□□ -0.96
SRRT-219ENST00000641476 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.05□□□□□ -0.96
SRRT-219ENST00000641476 RPL18AQ02543 176 aaKnown RBP9.05□□□□□ -0.96
SRRT-219ENST00000641476 Q6ZRP5 223 aa9.05□□□□□ -0.96
SRRT-219ENST00000641476 FAM104AQ969W3 186 aa9.05□□□□□ -0.96
SRRT-219ENST00000641476 SPANXA1Q9NS26 97 aa9.05□□□□□ -0.96
SRRT-219ENST00000641476 LINC01546A6NGU7 62 aa9.04□□□□□ -0.96
SRRT-219ENST00000641476 SPINK6Q6UWN8 80 aa9.04□□□□□ -0.96
SRRT-219ENST00000641476 OR10D4PQ8NGN7 298 aa9.04□□□□□ -0.96
SRRT-219ENST00000641476 A0A1W2PNN7 141 aa9.03□□□□□ -0.96
SRRT-219ENST00000641476 K7EMI3 77 aa9.03□□□□□ -0.96
SRRT-219ENST00000641476 MRPS36P82909 103 aaKnown RBP9.03□□□□□ -0.96
SRRT-219ENST00000641476 ORMDL2Q53FV1 153 aa9.03□□□□□ -0.96
SRRT-219ENST00000641476 FA2HQ7L5A8 372 aa9.03□□□□□ -0.96
SRRT-219ENST00000641476 ORAOV1Q8WV07 137 aa9.03□□□□□ -0.96
SRRT-219ENST00000641476 A0A0J9YXV3 536 aa9.02□□□□□ -0.97
SRRT-219ENST00000641476 IFITM10A6NMD0 228 aa9.02□□□□□ -0.97
SRRT-219ENST00000641476 REG3GQ6UW15 175 aa9.02□□□□□ -0.97
SRRT-219ENST00000641476 OPRPNQ99935 248 aaPredicted RBP9.02□□□□□ -0.97
SRRT-219ENST00000641476 IGHV3OR16-9A0A0B4J2B5 98 aa9.01□□□□□ -0.97
SRRT-219ENST00000641476 LINC00614P0C842 121 aa9.01□□□□□ -0.97
SRRT-219ENST00000641476 C9orf116Q5BN46 136 aaPredicted RBP9.01□□□□□ -0.97
SRRT-219ENST00000641476 KRTAP9-2Q9BYQ4 174 aa9.01□□□□□ -0.97
SRRT-219ENST00000641476 HIST1H2BKO60814 126 aa9□□□□□ -0.97
SRRT-219ENST00000641476 HIST1H2BJP06899 126 aa9□□□□□ -0.97
SRRT-219ENST00000641476 HIST1H2BOP23527 126 aa9□□□□□ -0.97
SRRT-219ENST00000641476 HIST1H2BBP33778 126 aa9□□□□□ -0.97
SRRT-219ENST00000641476 HIST1H2BDP58876 126 aa9□□□□□ -0.97
SRRT-219ENST00000641476 HIST1H2BCP62807 126 aa9□□□□□ -0.97
SRRT-219ENST00000641476 SRSF9Q13242 221 aaKnown RBP eCLIP9□□□□□ -0.97
SRRT-219ENST00000641476 HIST2H2BEQ16778 126 aa9□□□□□ -0.97
SRRT-219ENST00000641476 RNF151Q2KHN1 245 aa9□□□□□ -0.97
SRRT-219ENST00000641476 HIST2H2BFQ5QNW6 126 aaPredicted RBP9□□□□□ -0.97
SRRT-219ENST00000641476 C2orf66Q6UXQ4 117 aa9□□□□□ -0.97
SRRT-219ENST00000641476 HIST1H2BHQ93079 126 aa9□□□□□ -0.97
SRRT-219ENST00000641476 HIST1H2BNQ99877 126 aa9□□□□□ -0.97
SRRT-219ENST00000641476 HIST1H2BMQ99879 126 aa9□□□□□ -0.97
SRRT-219ENST00000641476 MRPL35Q9NZE8 188 aaKnown RBP9□□□□□ -0.97
SRRT-219ENST00000641476 LPAP08519 4548 aa8.99□□□□□ -0.97
SRRT-219ENST00000641476 RAB5BP61020 215 aa8.99□□□□□ -0.97
SRRT-219ENST00000641476 PSORS1C2Q9UIG4 136 aa8.99□□□□□ -0.97
SRRT-219ENST00000641476 CYSLTR1Q9Y271 337 aa8.99□□□□□ -0.97
SRRT-219ENST00000641476 A0A096LNJ9 63 aa8.98□□□□□ -0.97
SRRT-219ENST00000641476 NDUFA1O15239 70 aa8.98□□□□□ -0.97
SRRT-219ENST00000641476 LINC00310P59036 64 aa8.98□□□□□ -0.97
SRRT-219ENST00000641476 C10orf25Q5T742 122 aa8.98□□□□□ -0.97
SRRT-219ENST00000641476 PHF5AQ7RTV0 110 aaKnown RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms