RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 NPYP01303 97 aa10.23□□□□□ -0.77
PHGDH-213ENST00000641272 OR10D4PQ8NGN7 298 aa10.23□□□□□ -0.77
PHGDH-213ENST00000641272 FAM104AQ969W3 186 aa10.23□□□□□ -0.77
PHGDH-213ENST00000641272 NAT8Q9UHE5 227 aa10.23□□□□□ -0.77
PHGDH-213ENST00000641272 SMIM27A0A1W2PRY6 76 aa10.22□□□□□ -0.77
PHGDH-213ENST00000641272 SRSF3P84103 164 aaKnown RBP10.22□□□□□ -0.77
PHGDH-213ENST00000641272 C10orf25Q5T742 122 aa10.22□□□□□ -0.77
PHGDH-213ENST00000641272 FAM19A5Q7Z5A7 132 aaPredicted RBP10.22□□□□□ -0.77
PHGDH-213ENST00000641272 C20orf78Q9BR46 151 aa10.22□□□□□ -0.77
PHGDH-213ENST00000641272 SPANXA1Q9NS26 97 aa10.21□□□□□ -0.77
PHGDH-213ENST00000641272 LINC00862A6NCI5 91 aa10.2□□□□□ -0.78
PHGDH-213ENST00000641272 NDUFA1O15239 70 aa10.2□□□□□ -0.78
PHGDH-213ENST00000641272 HBBP68871 147 aa10.2□□□□□ -0.78
PHGDH-213ENST00000641272 KRTAP11-1Q8IUC1 163 aa10.2□□□□□ -0.78
PHGDH-213ENST00000641272 TRBV24-1A0A075B6N3 115 aa10.19□□□□□ -0.78
PHGDH-213ENST00000641272 IGHV3OR16-9A0A0B4J2B5 98 aa10.19□□□□□ -0.78
PHGDH-213ENST00000641272 RPL32P62910 135 aaKnown RBP10.19□□□□□ -0.78
PHGDH-213ENST00000641272 RNF151Q2KHN1 245 aa10.19□□□□□ -0.78
PHGDH-213ENST00000641272 UNQ6190/PRO20217Q6UXQ8 127 aa10.19□□□□□ -0.78
PHGDH-213ENST00000641272 MRPL35Q9NZE8 188 aaKnown RBP10.19□□□□□ -0.78
PHGDH-213ENST00000641272 C6orf48Q9UBA6 75 aa10.19□□□□□ -0.78
PHGDH-213ENST00000641272 A0A1B0GW15 77 aa10.18□□□□□ -0.78
PHGDH-213ENST00000641272 GAGE2EQ4V326 116 aa10.18□□□□□ -0.78
PHGDH-213ENST00000641272 PRR26Q8N8Z3 221 aa10.18□□□□□ -0.78
PHGDH-213ENST00000641272 GAGE2DQ9UEU5 116 aa10.18□□□□□ -0.78
PHGDH-213ENST00000641272 LPAP08519 4548 aa10.17□□□□□ -0.78
PHGDH-213ENST00000641272 A0A087WZ39 114 aa10.17□□□□□ -0.78
PHGDH-213ENST00000641272 A0A1B0GXF2 115 aa10.17□□□□□ -0.78
PHGDH-213ENST00000641272 IGLV7-43P04211 117 aa10.17□□□□□ -0.78
PHGDH-213ENST00000641272 MRPS36P82909 103 aaKnown RBP10.17□□□□□ -0.78
PHGDH-213ENST00000641272 TGIF2-C20orf24A0A0A6YYL0 155 aa10.16□□□□□ -0.78
PHGDH-213ENST00000641272 A0A1B0GVG6 124 aa10.16□□□□□ -0.78
PHGDH-213ENST00000641272 IMMP2LQ96T52 175 aa10.16□□□□□ -0.78
PHGDH-213ENST00000641272 F8W036 122 aa10.15□□□□□ -0.78
PHGDH-213ENST00000641272 S100A8P05109 93 aa10.15□□□□□ -0.78
PHGDH-213ENST00000641272 IGLV4-3A0A075B6K6 122 aa10.14□□□□□ -0.79
PHGDH-213ENST00000641272 M0QXV9 152 aa10.14□□□□□ -0.79
PHGDH-213ENST00000641272 IFI27P40305 119 aaPredicted RBP10.14□□□□□ -0.79
PHGDH-213ENST00000641272 PEA15Q15121 130 aa10.14□□□□□ -0.79
PHGDH-213ENST00000641272 C2orf82Q6UX34 121 aa10.14□□□□□ -0.79
PHGDH-213ENST00000641272 SMDT1Q9H4I9 107 aa10.14□□□□□ -0.79
PHGDH-213ENST00000641272 UBE2BP63146 152 aa10.13□□□□□ -0.79
PHGDH-213ENST00000641272 ZC2HC1BQ5TFG8 222 aa10.13□□□□□ -0.79
PHGDH-213ENST00000641272 KRTAP7-1Q8IUC3 87 aa10.13□□□□□ -0.79
PHGDH-213ENST00000641272 ORMDL3Q8N138 153 aa10.13□□□□□ -0.79
PHGDH-213ENST00000641272 DIRC1Q969H9 104 aa10.13□□□□□ -0.79
PHGDH-213ENST00000641272 PRELID3AQ96N28 172 aa10.13□□□□□ -0.79
PHGDH-213ENST00000641272 F8WDY8 70 aa10.12□□□□□ -0.79
PHGDH-213ENST00000641272 H0Y9J4 135 aa10.12□□□□□ -0.79
PHGDH-213ENST00000641272 TLX1NBP0CAT3 122 aa10.12□□□□□ -0.79
PHGDH-213ENST00000641272 RAB5AP20339 215 aa10.12□□□□□ -0.79
PHGDH-213ENST00000641272 LINC00242Q5T6M2 205 aa10.12□□□□□ -0.79
PHGDH-213ENST00000641272 LOC389332A0A1B0GUA5 103 aa10.11□□□□□ -0.79
PHGDH-213ENST00000641272 PPBPP02775 128 aa10.11□□□□□ -0.79
PHGDH-213ENST00000641272 KIAA0087Q14695 138 aa10.11□□□□□ -0.79
PHGDH-213ENST00000641272 TMEM136Q6ZRR5 245 aa10.11□□□□□ -0.79
PHGDH-213ENST00000641272 TMEM141Q96I45 108 aa10.1□□□□□ -0.79
PHGDH-213ENST00000641272 C9orf129Q5T035 196 aaKnown RBP10.08□□□□□ -0.8
PHGDH-213ENST00000641272 TEX43Q6ZNM6 134 aa10.08□□□□□ -0.8
PHGDH-213ENST00000641272 ATP5L2Q7Z4Y8 100 aa10.08□□□□□ -0.8
PHGDH-213ENST00000641272 TRBV30A0A0K0K1B3 111 aa10.07□□□□□ -0.8
PHGDH-213ENST00000641272 KRTAP1-4P0C5Y4 121 aa10.07□□□□□ -0.8
PHGDH-213ENST00000641272 UBE2D1P51668 147 aa10.07□□□□□ -0.8
PHGDH-213ENST00000641272 LINC00173Q6ZV60 143 aa10.07□□□□□ -0.8
PHGDH-213ENST00000641272 PACRGQ96M98 296 aaPredicted RBP10.07□□□□□ -0.8
PHGDH-213ENST00000641272 MAP1LC3AQ9H492 121 aa10.07□□□□□ -0.8
PHGDH-213ENST00000641272 TOMM7Q9P0U1 55 aa10.07□□□□□ -0.8
PHGDH-213ENST00000641272 PYGO1Q9Y3Y4 419 aa10.07□□□□□ -0.8
PHGDH-213ENST00000641272 NDUFC2-KCTD14E9PQ53 114 aa10.06□□□□□ -0.8
PHGDH-213ENST00000641272 C2orf66Q6UXQ4 117 aa10.06□□□□□ -0.8
PHGDH-213ENST00000641272 LINC00469Q8N7U9 141 aa10.06□□□□□ -0.8
PHGDH-213ENST00000641272 C2orf88Q9BSF0 95 aa10.06□□□□□ -0.8
PHGDH-213ENST00000641272 CYSLTR1Q9Y271 337 aa10.05□□□□□ -0.8
PHGDH-213ENST00000641272 Q6ZN92 141 aa10.04□□□□□ -0.8
PHGDH-213ENST00000641272 IGLV1-50A0A075B6I6 118 aa10.03□□□□□ -0.8
PHGDH-213ENST00000641272 PRSS2P07478 247 aa10.03□□□□□ -0.8
PHGDH-213ENST00000641272 Q8N8P6 123 aa10.02□□□□□ -0.81
PHGDH-213ENST00000641272 XAGE1AQ9HD64 81 aa10.02□□□□□ -0.81
PHGDH-213ENST00000641272 CKS1BP61024 79 aa10.01□□□□□ -0.81
PHGDH-213ENST00000641272 AMELXQ99217 191 aa10.01□□□□□ -0.81
PHGDH-213ENST00000641272 LAMTOR2Q9Y2Q5 125 aa10.01□□□□□ -0.81
PHGDH-213ENST00000641272 PRSS47A8MTI9 375 aa10□□□□□ -0.81
PHGDH-213ENST00000641272 VCX2Q9H322 139 aa10□□□□□ -0.81
PHGDH-213ENST00000641272 PRR4Q16378 134 aa9.99□□□□□ -0.81
PHGDH-213ENST00000641272 ORMDL2Q53FV1 153 aa9.99□□□□□ -0.81
PHGDH-213ENST00000641272 LINC01561Q8N1V8 128 aa9.99□□□□□ -0.81
PHGDH-213ENST00000641272 C6orf226Q5I0X4 101 aa9.98□□□□□ -0.81
PHGDH-213ENST00000641272 Q8IZM0 81 aa9.98□□□□□ -0.81
PHGDH-213ENST00000641272 ALKBH7Q9BT30 221 aaPredicted RBP9.98□□□□□ -0.81
PHGDH-213ENST00000641272 IGIPA6NJ69 53 aa9.97□□□□□ -0.81
PHGDH-213ENST00000641272 CDKN2A-AS1Q9UH64 79 aa9.97□□□□□ -0.81
PHGDH-213ENST00000641272 C22orf24Q9Y442 160 aa9.97□□□□□ -0.81
PHGDH-213ENST00000641272 MT-ND4LP03901 98 aa9.96□□□□□ -0.82
PHGDH-213ENST00000641272 RPL13AP40429 203 aaKnown RBP9.96□□□□□ -0.82
PHGDH-213ENST00000641272 ZNF861PO60384 105 aa9.95□□□□□ -0.82
PHGDH-213ENST00000641272 PNRC1Q12796 327 aaPredicted RBP9.95□□□□□ -0.82
PHGDH-213ENST00000641272 ANAPC16Q96DE5 110 aa9.95□□□□□ -0.82
PHGDH-213ENST00000641272 CTDSP1Q9GZU7 261 aa9.95□□□□□ -0.82
PHGDH-213ENST00000641272 GEMIN7Q9H840 131 aaKnown RBP9.95□□□□□ -0.82
PHGDH-213ENST00000641272 HERVK_113P63121 156 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms