RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 NPYP01303 97 aa6.58□□□□□ -1.36
PHGDH-212ENST00000641247 IGLC6P0CF74 106 aa6.58□□□□□ -1.36
PHGDH-212ENST00000641247 HERVK_113P61574 105 aa6.58□□□□□ -1.36
PHGDH-212ENST00000641247 ODF1Q14990 250 aa6.58□□□□□ -1.36
PHGDH-212ENST00000641247 ANXA2RQ3ZCQ2 193 aa6.58□□□□□ -1.36
PHGDH-212ENST00000641247 SH2D6Q7Z4S9 175 aa6.58□□□□□ -1.36
PHGDH-212ENST00000641247 PCP2Q8IVA1 136 aa6.58□□□□□ -1.36
PHGDH-212ENST00000641247 Q8N8P6 123 aa6.58□□□□□ -1.36
PHGDH-212ENST00000641247 NAA38Q9BRA0 125 aaKnown RBP6.58□□□□□ -1.36
PHGDH-212ENST00000641247 CDIP1Q9H305 208 aa6.58□□□□□ -1.36
PHGDH-212ENST00000641247 A0A087WX48 190 aa6.57□□□□□ -1.36
PHGDH-212ENST00000641247 ARMS2P0C7Q2 107 aa6.57□□□□□ -1.36
PHGDH-212ENST00000641247 ZC2HC1BQ5TFG8 222 aa6.57□□□□□ -1.36
PHGDH-212ENST00000641247 FAM159AQ6UWV7 190 aa6.57□□□□□ -1.36
PHGDH-212ENST00000641247 AMN1Q8IY45 258 aa6.57□□□□□ -1.36
PHGDH-212ENST00000641247 TPPP3Q9BW30 176 aa6.57□□□□□ -1.36
PHGDH-212ENST00000641247 HHLA3Q9XRX5 114 aa6.57□□□□□ -1.36
PHGDH-212ENST00000641247 IGHV1OR15-1A0A075B7D0 117 aa6.56□□□□□ -1.36
PHGDH-212ENST00000641247 A0A096LPF7 62 aa6.56□□□□□ -1.36
PHGDH-212ENST00000641247 LOC389332A0A1B0GUA5 103 aa6.56□□□□□ -1.36
PHGDH-212ENST00000641247 INSP01308 110 aa6.56□□□□□ -1.36
PHGDH-212ENST00000641247 NDUFV3P56181 108 aaKnown RBP6.56□□□□□ -1.36
PHGDH-212ENST00000641247 KRTAP10-4P60372 401 aaPredicted RBP6.56□□□□□ -1.36
PHGDH-212ENST00000641247 LYZL1Q6UWQ5 148 aa6.56□□□□□ -1.36
PHGDH-212ENST00000641247 LINC00612Q8N6U2 182 aa6.56□□□□□ -1.36
PHGDH-212ENST00000641247 VSIG2Q96IQ7 327 aa6.56□□□□□ -1.36
PHGDH-212ENST00000641247 LINC01600Q96MT4 127 aa6.56□□□□□ -1.36
PHGDH-212ENST00000641247 IMUPQ9GZP8 106 aa6.56□□□□□ -1.36
PHGDH-212ENST00000641247 NOP10Q9NPE3 64 aaKnown RBP6.56□□□□□ -1.36
PHGDH-212ENST00000641247 SS18L2Q9UHA2 77 aa6.56□□□□□ -1.36
PHGDH-212ENST00000641247 A0A096LNJ9 63 aa6.55□□□□□ -1.36
PHGDH-212ENST00000641247 B5MCH6 92 aa6.55□□□□□ -1.36
PHGDH-212ENST00000641247 GNRH2O43555 120 aa6.55□□□□□ -1.36
PHGDH-212ENST00000641247 HTN1P15515 57 aa6.55□□□□□ -1.36
PHGDH-212ENST00000641247 S100A4P26447 101 aaKnown RBP6.55□□□□□ -1.36
PHGDH-212ENST00000641247 PSMB2P49721 201 aa6.55□□□□□ -1.36
PHGDH-212ENST00000641247 RPL32P62910 135 aaKnown RBP6.55□□□□□ -1.36
PHGDH-212ENST00000641247 HERV-K104P63124 156 aa6.55□□□□□ -1.36
PHGDH-212ENST00000641247 MRPL51Q4U2R6 128 aaKnown RBP6.55□□□□□ -1.36
PHGDH-212ENST00000641247 ORMDL2Q53FV1 153 aa6.55□□□□□ -1.36
PHGDH-212ENST00000641247 DEFB104AQ8WTQ1 72 aa6.55□□□□□ -1.36
PHGDH-212ENST00000641247 C20orf78Q9BR46 151 aa6.55□□□□□ -1.36
PHGDH-212ENST00000641247 LINC00467Q9BRT7 94 aa6.55□□□□□ -1.36
PHGDH-212ENST00000641247 CNFNQ9BYD5 112 aa6.55□□□□□ -1.36
PHGDH-212ENST00000641247 TP73-AS1Q9UF72 201 aa6.55□□□□□ -1.36
PHGDH-212ENST00000641247 TRBV7-3A0A075B6L6 115 aa6.54□□□□□ -1.36
PHGDH-212ENST00000641247 H3BVH4 76 aa6.54□□□□□ -1.36
PHGDH-212ENST00000641247 MT-ATP8P03928 68 aa6.54□□□□□ -1.36
PHGDH-212ENST00000641247 ACYP1P07311 99 aa6.54□□□□□ -1.36
PHGDH-212ENST00000641247 SRSF9Q13242 221 aaKnown RBP eCLIP6.54□□□□□ -1.36
PHGDH-212ENST00000641247 LAGE3Q14657 143 aa6.54□□□□□ -1.36
PHGDH-212ENST00000641247 C5orf47Q569G3 176 aa6.54□□□□□ -1.36
PHGDH-212ENST00000641247 LINC01587Q99440 93 aa6.54□□□□□ -1.36
PHGDH-212ENST00000641247 TRGV11A0A075B6L2 103 aa6.53□□□□□ -1.36
PHGDH-212ENST00000641247 IGHV3-16A0A0C4DH30 117 aa6.53□□□□□ -1.36
PHGDH-212ENST00000641247 LOC107984156A0A0G2JMH3 177 aa6.53□□□□□ -1.36
PHGDH-212ENST00000641247 F8VRH5 84 aa6.53□□□□□ -1.36
PHGDH-212ENST00000641247 RNASE3P12724 160 aaKnown RBP6.53□□□□□ -1.36
PHGDH-212ENST00000641247 UBE2D3P61077 147 aa6.53□□□□□ -1.36
PHGDH-212ENST00000641247 UBE2D2P62837 147 aa6.53□□□□□ -1.36
PHGDH-212ENST00000641247 ARL17AQ8IVW1 177 aa6.53□□□□□ -1.36
PHGDH-212ENST00000641247 LINC00528Q8N1L1 170 aa6.53□□□□□ -1.36
PHGDH-212ENST00000641247 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.52□□□□□ -1.37
PHGDH-212ENST00000641247 FAM240AA0A1B0GVK7 77 aa6.52□□□□□ -1.37
PHGDH-212ENST00000641247 H3BNG1 76 aa6.52□□□□□ -1.37
PHGDH-212ENST00000641247 NXPH4O95158 308 aa6.52□□□□□ -1.37
PHGDH-212ENST00000641247 PLA2G1BP04054 148 aaKnown RBP6.52□□□□□ -1.37
PHGDH-212ENST00000641247 UBE2D1P51668 147 aa6.52□□□□□ -1.37
PHGDH-212ENST00000641247 SPANXN1Q5VSR9 72 aa6.52□□□□□ -1.37
PHGDH-212ENST00000641247 SCGB1D4Q6XE38 83 aa6.52□□□□□ -1.37
PHGDH-212ENST00000641247 PHLDA3Q9Y5J5 127 aa6.52□□□□□ -1.37
PHGDH-212ENST00000641247 IGLV5-52A0A0A0MRZ9 124 aa6.51□□□□□ -1.37
PHGDH-212ENST00000641247 TRAV8-4A0A0B4J246 113 aa6.51□□□□□ -1.37
PHGDH-212ENST00000641247 LRCOL1A6NCL2 159 aa6.51□□□□□ -1.37
PHGDH-212ENST00000641247 K7ERJ3 54 aa6.51□□□□□ -1.37
PHGDH-212ENST00000641247 TNFRSF6BO95407 300 aa6.51□□□□□ -1.37
PHGDH-212ENST00000641247 OXTP01178 125 aa6.51□□□□□ -1.37
PHGDH-212ENST00000641247 RPL13AP40429 203 aaKnown RBP6.51□□□□□ -1.37
PHGDH-212ENST00000641247 ATXN8Q156A1 80 aa6.51□□□□□ -1.37
PHGDH-212ENST00000641247 SMIM20Q8N5G0 67 aa6.51□□□□□ -1.37
PHGDH-212ENST00000641247 C16orf74Q96GX8 76 aa6.51□□□□□ -1.37
PHGDH-212ENST00000641247 C9orf85Q96MD7 179 aa6.51□□□□□ -1.37
PHGDH-212ENST00000641247 MSRB1Q9NZV6 116 aa6.51□□□□□ -1.37
PHGDH-212ENST00000641247 M0R381 172 aa6.5□□□□□ -1.37
PHGDH-212ENST00000641247 COX6CP09669 75 aa6.5□□□□□ -1.37
PHGDH-212ENST00000641247 RPS28P62857 69 aaKnown RBP6.5□□□□□ -1.37
PHGDH-212ENST00000641247 OR13C6PQ8NH95 151 aa6.5□□□□□ -1.37
PHGDH-212ENST00000641247 PTH2Q96A98 100 aa6.5□□□□□ -1.37
PHGDH-212ENST00000641247 DNAJC30Q96LL9 226 aa6.5□□□□□ -1.37
PHGDH-212ENST00000641247 PRO1854Q9UHT4 67 aa6.5□□□□□ -1.37
PHGDH-212ENST00000641247 LRP2P98164 4655 aa6.49□□□□□ -1.37
PHGDH-212ENST00000641247 A0A1B0GX51 115 aa6.49□□□□□ -1.37
PHGDH-212ENST00000641247 SLC25A20O43772 301 aa6.49□□□□□ -1.37
PHGDH-212ENST00000641247 ZNF415Q09FC8 603 aa6.49□□□□□ -1.37
PHGDH-212ENST00000641247 MEIG1Q5JSS6 88 aa6.49□□□□□ -1.37
PHGDH-212ENST00000641247 NFE4Q86UQ8 179 aa6.49□□□□□ -1.37
PHGDH-212ENST00000641247 C10orf126Q8N4M7 172 aa6.49□□□□□ -1.37
PHGDH-212ENST00000641247 C11orf72Q8NBR9 251 aa6.49□□□□□ -1.37
PHGDH-212ENST00000641247 TMEM101Q96IK0 257 aa6.49□□□□□ -1.37
PHGDH-212ENST00000641247 IGKV2D-26A0A0A0MRZ7 120 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms