RNA–Protein interactions for RNA: ENST00000638573.1

COLCA2-206, Transcript of colorectal cancer associated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COLCA2, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-206ENST00000638573 SCGB3A1Q96QR1 104 aa10.65□□□□□ -0.7
COLCA2-206ENST00000638573 TIMM17AQ99595 171 aa10.65□□□□□ -0.7
COLCA2-206ENST00000638573 VCX2Q9H322 139 aa10.65□□□□□ -0.7
COLCA2-206ENST00000638573 VPS13BQ7Z7G8 4022 aa10.64□□□□□ -0.71
COLCA2-206ENST00000638573 PRSS1P07477 247 aa10.64□□□□□ -0.71
COLCA2-206ENST00000638573 MALP21145 153 aa10.64□□□□□ -0.71
COLCA2-206ENST00000638573 MYCBP2O75592 4640 aa10.63□□□□□ -0.71
COLCA2-206ENST00000638573 IGIPA6NJ69 53 aa10.63□□□□□ -0.71
COLCA2-206ENST00000638573 COLCA2A8K830 154 aa10.63□□□□□ -0.71
COLCA2-206ENST00000638573 COX7A2LO14548 114 aa10.63□□□□□ -0.71
COLCA2-206ENST00000638573 SCO1O75880 301 aa10.63□□□□□ -0.71
COLCA2-206ENST00000638573 TRGC2P03986 189 aa10.63□□□□□ -0.71
COLCA2-206ENST00000638573 ERASQ7Z444 233 aa10.63□□□□□ -0.71
COLCA2-206ENST00000638573 FAM104AQ969W3 186 aa10.63□□□□□ -0.71
COLCA2-206ENST00000638573 IGHV1-58A0A0C4DH39 117 aa10.62□□□□□ -0.71
COLCA2-206ENST00000638573 HERC1Q15751 4861 aa10.62□□□□□ -0.71
COLCA2-206ENST00000638573 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.61□□□□□ -0.71
COLCA2-206ENST00000638573 HBDP02042 147 aa10.61□□□□□ -0.71
COLCA2-206ENST00000638573 C15orf56Q8N910 161 aa10.61□□□□□ -0.71
COLCA2-206ENST00000638573 CIRBP-AS1Q8TBR5 109 aa10.61□□□□□ -0.71
COLCA2-206ENST00000638573 AMELXQ99217 191 aa10.61□□□□□ -0.71
COLCA2-206ENST00000638573 PANO1I0J062 215 aa10.6□□□□□ -0.71
COLCA2-206ENST00000638573 APOMO95445 188 aa10.6□□□□□ -0.71
COLCA2-206ENST00000638573 KRTAP10-4P60372 401 aaPredicted RBP10.6□□□□□ -0.71
COLCA2-206ENST00000638573 HIGD2BQ4VC39 106 aa10.6□□□□□ -0.71
COLCA2-206ENST00000638573 BAGE3Q86Y29 109 aa10.6□□□□□ -0.71
COLCA2-206ENST00000638573 CHCHD1Q96BP2 118 aaKnown RBP10.6□□□□□ -0.71
COLCA2-206ENST00000638573 URB1-AS1Q96HZ7 61 aa10.6□□□□□ -0.71
COLCA2-206ENST00000638573 CHAC1Q9BUX1 264 aa10.6□□□□□ -0.71
COLCA2-206ENST00000638573 DMBT1Q9UGM3 2413 aaPredicted RBP10.59□□□□□ -0.71
COLCA2-206ENST00000638573 GVQW2A0A096LPI5 108 aaPredicted RBP10.59□□□□□ -0.71
COLCA2-206ENST00000638573 S100A1P23297 94 aa10.59□□□□□ -0.71
COLCA2-206ENST00000638573 C5orf38Q86SI9 138 aa10.59□□□□□ -0.71
COLCA2-206ENST00000638573 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.58□□□□□ -0.72
COLCA2-206ENST00000638573 ZNF561-AS1K7EIQ3 104 aa10.58□□□□□ -0.72
COLCA2-206ENST00000638573 UBE2D1P51668 147 aa10.58□□□□□ -0.72
COLCA2-206ENST00000638573 CNBPP62633 177 aaKnown RBP10.58□□□□□ -0.72
COLCA2-206ENST00000638573 SEC11AP67812 179 aa10.58□□□□□ -0.72
COLCA2-206ENST00000638573 PMCHL1Q16048 86 aa10.58□□□□□ -0.72
COLCA2-206ENST00000638573 ZC2HC1BQ5TFG8 222 aa10.58□□□□□ -0.72
COLCA2-206ENST00000638573 LINC00173Q6ZV60 143 aa10.58□□□□□ -0.72
COLCA2-206ENST00000638573 LINC00242Q5T6M2 205 aa10.57□□□□□ -0.72
COLCA2-206ENST00000638573 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.57□□□□□ -0.72
COLCA2-206ENST00000638573 IGHV3OR16-9A0A0B4J2B5 98 aa10.56□□□□□ -0.72
COLCA2-206ENST00000638573 ATP6V1G1O75348 118 aa10.56□□□□□ -0.72
COLCA2-206ENST00000638573 HSBP1O75506 76 aa10.56□□□□□ -0.72
COLCA2-206ENST00000638573 A0A096LNJ9 63 aa10.55□□□□□ -0.72
COLCA2-206ENST00000638573 ATP5LO75964 103 aa10.55□□□□□ -0.72
COLCA2-206ENST00000638573 HERVK_113P63121 156 aa10.55□□□□□ -0.72
COLCA2-206ENST00000638573 PMVKQ15126 192 aa10.55□□□□□ -0.72
COLCA2-206ENST00000638573 C9orf163Q8N9P6 203 aa10.55□□□□□ -0.72
COLCA2-206ENST00000638573 GEMIN7Q9H840 131 aaKnown RBP10.55□□□□□ -0.72
COLCA2-206ENST00000638573 SLPIP03973 132 aa10.54□□□□□ -0.72
COLCA2-206ENST00000638573 PLA2G1BP04054 148 aaKnown RBP10.54□□□□□ -0.72
COLCA2-206ENST00000638573 OR10D4PQ8NGN7 298 aa10.54□□□□□ -0.72
COLCA2-206ENST00000638573 IGHV3-64A0A075B6Q5 118 aa10.53□□□□□ -0.72
COLCA2-206ENST00000638573 A0A087WZ39 114 aa10.53□□□□□ -0.72
COLCA2-206ENST00000638573 NDUFA6P56556 154 aa10.53□□□□□ -0.72
COLCA2-206ENST00000638573 SPAG11BQ08648 103 aa10.53□□□□□ -0.72
COLCA2-206ENST00000638573 PDZD11Q5EBL8 140 aa10.53□□□□□ -0.72
COLCA2-206ENST00000638573 FAM19A3Q7Z5A8 133 aa10.53□□□□□ -0.72
COLCA2-206ENST00000638573 ORAOV1Q8WV07 137 aa10.53□□□□□ -0.72
COLCA2-206ENST00000638573 COX6A2Q02221 97 aa10.52□□□□□ -0.73
COLCA2-206ENST00000638573 CARD19Q96LW7 228 aa10.52□□□□□ -0.73
COLCA2-206ENST00000638573 PACRGQ96M98 296 aaPredicted RBP10.52□□□□□ -0.73
COLCA2-206ENST00000638573 CST9LQ9H4G1 147 aa10.52□□□□□ -0.73
COLCA2-206ENST00000638573 PKIGQ9Y2B9 76 aa10.52□□□□□ -0.73
COLCA2-206ENST00000638573 IGLV4-69A0A075B6H9 119 aa10.51□□□□□ -0.73
COLCA2-206ENST00000638573 A0A0J9YXV3 536 aa10.51□□□□□ -0.73
COLCA2-206ENST00000638573 SERF1AO75920 110 aa10.51□□□□□ -0.73
COLCA2-206ENST00000638573 HNRNPA3P51991 378 aaKnown RBP10.51□□□□□ -0.73
COLCA2-206ENST00000638573 LINC01561Q8N1V8 128 aa10.51□□□□□ -0.73
COLCA2-206ENST00000638573 LINC00526Q96FQ7 95 aa10.51□□□□□ -0.73
COLCA2-206ENST00000638573 CAMK2N2Q96S95 79 aa10.51□□□□□ -0.73
COLCA2-206ENST00000638573 TINCRA0A1B0GVN0 87 aa10.5□□□□□ -0.73
COLCA2-206ENST00000638573 CHTF8P0CG12 524 aa10.5□□□□□ -0.73
COLCA2-206ENST00000638573 SYCNQ0VAF6 134 aa10.5□□□□□ -0.73
COLCA2-206ENST00000638573 SDIM1Q6ZPB5 146 aa10.5□□□□□ -0.73
COLCA2-206ENST00000638573 LINC00469Q8N7U9 141 aa10.5□□□□□ -0.73
COLCA2-206ENST00000638573 J3QL48 77 aa10.49□□□□□ -0.73
COLCA2-206ENST00000638573 FAM19A2Q8N3H0 131 aa10.49□□□□□ -0.73
COLCA2-206ENST00000638573 C2orf48Q96LS8 159 aa10.49□□□□□ -0.73
COLCA2-206ENST00000638573 IFI27L1Q96BM0 104 aa10.48□□□□□ -0.73
COLCA2-206ENST00000638573 CDKN2A-AS1Q9UH64 79 aa10.48□□□□□ -0.73
COLCA2-206ENST00000638573 F8WDY8 70 aa10.47□□□□□ -0.73
COLCA2-206ENST00000638573 PRSS2P07478 247 aa10.47□□□□□ -0.73
COLCA2-206ENST00000638573 H3BRM9 83 aa10.46□□□□□ -0.73
COLCA2-206ENST00000638573 NDUFA1O15239 70 aa10.46□□□□□ -0.73
COLCA2-206ENST00000638573 HIST1H2BKO60814 126 aa10.46□□□□□ -0.73
COLCA2-206ENST00000638573 LEPROTL1O95214 131 aa10.46□□□□□ -0.73
COLCA2-206ENST00000638573 HIST1H2BJP06899 126 aa10.46□□□□□ -0.73
COLCA2-206ENST00000638573 HIST1H2BOP23527 126 aa10.46□□□□□ -0.73
COLCA2-206ENST00000638573 HIST1H2BBP33778 126 aa10.46□□□□□ -0.73
COLCA2-206ENST00000638573 HIST1H2BDP58876 126 aa10.46□□□□□ -0.73
COLCA2-206ENST00000638573 HIST1H2BCP62807 126 aa10.46□□□□□ -0.73
COLCA2-206ENST00000638573 HIST2H2BEQ16778 126 aa10.46□□□□□ -0.73
COLCA2-206ENST00000638573 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.46□□□□□ -0.73
COLCA2-206ENST00000638573 HIST1H2BHQ93079 126 aa10.46□□□□□ -0.73
COLCA2-206ENST00000638573 HIST1H2BNQ99877 126 aa10.46□□□□□ -0.73
COLCA2-206ENST00000638573 HIST1H2BMQ99879 126 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms