RNA–Protein interactions for RNA: ENST00000638159.1

GABRA1-220, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5 BASIC

Gene GABRA1, Length 4,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-220ENST00000638159 HIST1H2BOP23527 126 aa2.76□□□□□ -1.97
GABRA1-220ENST00000638159 HIST1H2BBP33778 126 aa2.76□□□□□ -1.97
GABRA1-220ENST00000638159 HIST1H2BDP58876 126 aa2.76□□□□□ -1.97
GABRA1-220ENST00000638159 HIST1H2BCP62807 126 aa2.76□□□□□ -1.97
GABRA1-220ENST00000638159 CCL20P78556 96 aa2.76□□□□□ -1.97
GABRA1-220ENST00000638159 HIST2H2BEQ16778 126 aa2.76□□□□□ -1.97
GABRA1-220ENST00000638159 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.76□□□□□ -1.97
GABRA1-220ENST00000638159 HIST1H2BHQ93079 126 aa2.76□□□□□ -1.97
GABRA1-220ENST00000638159 FAM19A4Q96LR4 140 aa2.76□□□□□ -1.97
GABRA1-220ENST00000638159 HIST1H2BNQ99877 126 aa2.76□□□□□ -1.97
GABRA1-220ENST00000638159 HIST1H2BMQ99879 126 aa2.76□□□□□ -1.97
GABRA1-220ENST00000638159 TMEM14CQ9P0S9 112 aa2.76□□□□□ -1.97
GABRA1-220ENST00000638159 TP73-AS1Q9UF72 201 aa2.76□□□□□ -1.97
GABRA1-220ENST00000638159 ZFP30Q9Y2G7 519 aa2.76□□□□□ -1.97
GABRA1-220ENST00000638159 IGKV1D-37A0A075B6S9 117 aa2.76□□□□□ -1.97
GABRA1-220ENST00000638159 CXCL1P09341 107 aa2.76□□□□□ -1.97
GABRA1-220ENST00000638159 CFC1P0CG37 223 aa2.76□□□□□ -1.97
GABRA1-220ENST00000638159 IFI27P40305 119 aaPredicted RBP2.76□□□□□ -1.97
GABRA1-220ENST00000638159 BATFQ16520 125 aa2.76□□□□□ -1.97
GABRA1-220ENST00000638159 LINC00612Q8N6U2 182 aa2.76□□□□□ -1.97
GABRA1-220ENST00000638159 RYR1P21817 5038 aa2.75□□□□□ -1.97
GABRA1-220ENST00000638159 LYSTQ99698 3801 aa2.75□□□□□ -1.97
GABRA1-220ENST00000638159 F8WDY8 70 aa2.75□□□□□ -1.97
GABRA1-220ENST00000638159 BCL2P10415 239 aa2.75□□□□□ -1.97
GABRA1-220ENST00000638159 HBBP68871 147 aa2.75□□□□□ -1.97
GABRA1-220ENST00000638159 SRSF9Q13242 221 aaKnown RBP eCLIP2.75□□□□□ -1.97
GABRA1-220ENST00000638159 SDIM1Q6ZPB5 146 aa2.75□□□□□ -1.97
GABRA1-220ENST00000638159 PHF5AQ7RTV0 110 aaKnown RBP2.75□□□□□ -1.97
GABRA1-220ENST00000638159 C14orf144Q96I85 54 aa2.75□□□□□ -1.97
GABRA1-220ENST00000638159 A0A096LNI7 61 aa2.75□□□□□ -1.97
GABRA1-220ENST00000638159 H3BRM9 83 aa2.75□□□□□ -1.97
GABRA1-220ENST00000638159 FOXA3P55318 350 aaPredicted RBP2.75□□□□□ -1.97
GABRA1-220ENST00000638159 ZNF726P1Q15940 193 aa2.75□□□□□ -1.97
GABRA1-220ENST00000638159 MAP1LC3CQ9BXW4 147 aa2.75□□□□□ -1.97
GABRA1-220ENST00000638159 SVEP1Q4LDE5 3571 aa2.75□□□□□ -1.97
GABRA1-220ENST00000638159 HYDINQ4G0P3 5121 aa2.75□□□□□ -1.97
GABRA1-220ENST00000638159 ZNF861PO60384 105 aa2.75□□□□□ -1.97
GABRA1-220ENST00000638159 SRP19P09132 144 aaKnown RBP2.75□□□□□ -1.97
GABRA1-220ENST00000638159 PNRC1Q12796 327 aaPredicted RBP2.75□□□□□ -1.97
GABRA1-220ENST00000638159 C6orf99Q4VX62 202 aa2.75□□□□□ -1.97
GABRA1-220ENST00000638159 HIST3H2BBQ8N257 126 aa2.75□□□□□ -1.97
GABRA1-220ENST00000638159 MANBALQ9NQG1 85 aa2.75□□□□□ -1.97
GABRA1-220ENST00000638159 DNAH8Q96JB1 4490 aa2.74□□□□□ -1.97
GABRA1-220ENST00000638159 PGPEP1LA6NFU8 196 aa2.74□□□□□ -1.97
GABRA1-220ENST00000638159 KLLNB2CW77 178 aa2.74□□□□□ -1.97
GABRA1-220ENST00000638159 NCR2O95944 276 aa2.74□□□□□ -1.97
GABRA1-220ENST00000638159 CXorf1O96002 111 aa2.74□□□□□ -1.97
GABRA1-220ENST00000638159 PTTG1IPP53801 180 aa2.74□□□□□ -1.97
GABRA1-220ENST00000638159 SERF2P84101 59 aa2.74□□□□□ -1.97
GABRA1-220ENST00000638159 WFDC2Q14508 124 aa2.74□□□□□ -1.97
GABRA1-220ENST00000638159 MEIG1Q5JSS6 88 aa2.74□□□□□ -1.97
GABRA1-220ENST00000638159 TRBV24-1A0A075B6N3 115 aa2.74□□□□□ -1.97
GABRA1-220ENST00000638159 CTXND1A0A1B0GTU2 59 aa2.74□□□□□ -1.97
GABRA1-220ENST00000638159 MIR17HGQ75NE6 70 aa2.74□□□□□ -1.97
GABRA1-220ENST00000638159 JPT2Q9H910 190 aa2.74□□□□□ -1.97
GABRA1-220ENST00000638159 PTH2Q96A98 100 aa2.74□□□□□ -1.97
GABRA1-220ENST00000638159 HIST1H2BLQ99880 126 aa2.74□□□□□ -1.97
GABRA1-220ENST00000638159 CNFNQ9BYD5 112 aa2.74□□□□□ -1.97
GABRA1-220ENST00000638159 TCL1BO95988 128 aa2.73□□□□□ -1.97
GABRA1-220ENST00000638159 IQCJQ1A5X6 159 aa2.73□□□□□ -1.97
GABRA1-220ENST00000638159 CD164L2Q6UWJ8 174 aa2.73□□□□□ -1.97
GABRA1-220ENST00000638159 PCP2Q8IVA1 136 aa2.73□□□□□ -1.97
GABRA1-220ENST00000638159 NRACQ8N912 160 aa2.73□□□□□ -1.97
GABRA1-220ENST00000638159 LINC00526Q96FQ7 95 aa2.73□□□□□ -1.97
GABRA1-220ENST00000638159 NAT8Q9UHE5 227 aa2.73□□□□□ -1.97
GABRA1-220ENST00000638159 S100A7L2Q5SY68 101 aa2.73□□□□□ -1.97
GABRA1-220ENST00000638159 FAM231DQ6ZW35 169 aa2.73□□□□□ -1.97
GABRA1-220ENST00000638159 BAGE3Q86Y29 109 aa2.73□□□□□ -1.97
GABRA1-220ENST00000638159 FAT2Q9NYQ8 4349 aa2.73□□□□□ -1.97
GABRA1-220ENST00000638159 F2Z2F3 143 aa2.73□□□□□ -1.97
GABRA1-220ENST00000638159 M0R143 59 aa2.73□□□□□ -1.97
GABRA1-220ENST00000638159 TAL2Q16559 108 aa2.73□□□□□ -1.97
GABRA1-220ENST00000638159 CST9LQ9H4G1 147 aa2.73□□□□□ -1.97
GABRA1-220ENST00000638159 DNAH2Q9P225 4427 aa2.73□□□□□ -1.97
GABRA1-220ENST00000638159 IGLV9-49A0A0B4J1Y8 123 aa2.73□□□□□ -1.97
GABRA1-220ENST00000638159 MUC21A0A0G2JKD1 596 aa2.73□□□□□ -1.97
GABRA1-220ENST00000638159 MUC21A0A140T8X8 626 aa2.73□□□□□ -1.97
GABRA1-220ENST00000638159 I3L3M4 83 aa2.73□□□□□ -1.97
GABRA1-220ENST00000638159 VCYO14598 125 aa2.73□□□□□ -1.97
GABRA1-220ENST00000638159 MEF2BQ02080 365 aaPredicted RBP2.73□□□□□ -1.97
GABRA1-220ENST00000638159 JOSD1Q15040 202 aaPredicted RBP2.73□□□□□ -1.97
GABRA1-220ENST00000638159 H7C423 109 aa2.72□□□□□ -1.97
GABRA1-220ENST00000638159 RIGQ13278 110 aa2.72□□□□□ -1.97
GABRA1-220ENST00000638159 SMIM2Q9BVW6 85 aa2.72□□□□□ -1.97
GABRA1-220ENST00000638159 VCX2Q9H322 139 aa2.72□□□□□ -1.97
GABRA1-220ENST00000638159 LAMTOR3Q9UHA4 124 aa2.72□□□□□ -1.97
GABRA1-220ENST00000638159 WDR83OSQ9Y284 106 aa2.72□□□□□ -1.97
GABRA1-220ENST00000638159 C20orf202A1L168 122 aa2.72□□□□□ -1.97
GABRA1-220ENST00000638159 TMEM250H0YL14 139 aa2.72□□□□□ -1.97
GABRA1-220ENST00000638159 PDE6DO43924 150 aa2.72□□□□□ -1.97
GABRA1-220ENST00000638159 PAGE4O60829 102 aa2.72□□□□□ -1.97
GABRA1-220ENST00000638159 GAGE2AQ6NT46 116 aa2.72□□□□□ -1.97
GABRA1-220ENST00000638159 RBM12B-AS1Q9P1G2 102 aa2.72□□□□□ -1.97
GABRA1-220ENST00000638159 TRAPPC1Q9Y5R8 145 aa2.72□□□□□ -1.97
GABRA1-220ENST00000638159 TRBV20OR9-2A0A075B6H5 130 aa2.72□□□□□ -1.97
GABRA1-220ENST00000638159 HSBP1L1C9JCN9 74 aa2.72□□□□□ -1.97
GABRA1-220ENST00000638159 CXCL5P42830 114 aa2.72□□□□□ -1.97
GABRA1-220ENST00000638159 ZFAND2AQ8N6M9 145 aa2.72□□□□□ -1.97
GABRA1-220ENST00000638159 C11orf72Q8NBR9 251 aa2.72□□□□□ -1.97
GABRA1-220ENST00000638159 EPDR1Q9UM22 224 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms