RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 LINC00528Q8N1L1 170 aa8.03□□□□□ -1.12
CLN6-225ENST00000638144 PRSS3P2Q8NHM4 247 aa8.03□□□□□ -1.12
CLN6-225ENST00000638144 TMEM141Q96I45 108 aa8.03□□□□□ -1.12
CLN6-225ENST00000638144 LINC00173Q6ZV60 143 aa8.02□□□□□ -1.13
CLN6-225ENST00000638144 CBLN2Q8IUK8 224 aa8.02□□□□□ -1.13
CLN6-225ENST00000638144 PYGO1Q9Y3Y4 419 aa8.02□□□□□ -1.13
CLN6-225ENST00000638144 TRAPPC1Q9Y5R8 145 aa8.02□□□□□ -1.13
CLN6-225ENST00000638144 IGLV4-69A0A075B6H9 119 aa8.01□□□□□ -1.13
CLN6-225ENST00000638144 COX6A2Q02221 97 aa8.01□□□□□ -1.13
CLN6-225ENST00000638144 IGKV2-24A0A0C4DH68 120 aa8□□□□□ -1.13
CLN6-225ENST00000638144 IGIPA6NJ69 53 aa8□□□□□ -1.13
CLN6-225ENST00000638144 ZNF561-AS1K7EIQ3 104 aa8□□□□□ -1.13
CLN6-225ENST00000638144 TEX43Q6ZNM6 134 aa8□□□□□ -1.13
CLN6-225ENST00000638144 CARD19Q96LW7 228 aa8□□□□□ -1.13
CLN6-225ENST00000638144 YPEL4Q96NS1 127 aa8□□□□□ -1.13
CLN6-225ENST00000638144 IGHV3OR16-9A0A0B4J2B5 98 aa7.99□□□□□ -1.13
CLN6-225ENST00000638144 FAM229AH3BQW9 127 aa7.99□□□□□ -1.13
CLN6-225ENST00000638144 K7EMI3 77 aa7.99□□□□□ -1.13
CLN6-225ENST00000638144 SPAG11BQ08648 103 aa7.99□□□□□ -1.13
CLN6-225ENST00000638144 LINC00242Q5T6M2 205 aa7.99□□□□□ -1.13
CLN6-225ENST00000638144 Q6ZN92 141 aa7.99□□□□□ -1.13
CLN6-225ENST00000638144 Q6ZRU5 148 aa7.99□□□□□ -1.13
CLN6-225ENST00000638144 FA2HQ7L5A8 372 aa7.99□□□□□ -1.13
CLN6-225ENST00000638144 ORAOV1Q8WV07 137 aa7.99□□□□□ -1.13
CLN6-225ENST00000638144 TOMM6Q96B49 74 aa7.99□□□□□ -1.13
CLN6-225ENST00000638144 UBE2D1P51668 147 aa7.98□□□□□ -1.13
CLN6-225ENST00000638144 SYCNQ0VAF6 134 aa7.98□□□□□ -1.13
CLN6-225ENST00000638144 C18orf32Q8TCD1 76 aa7.98□□□□□ -1.13
CLN6-225ENST00000638144 SCGB3A1Q96QR1 104 aa7.98□□□□□ -1.13
CLN6-225ENST00000638144 AMELXQ99217 191 aa7.98□□□□□ -1.13
CLN6-225ENST00000638144 C2orf88Q9BSF0 95 aa7.98□□□□□ -1.13
CLN6-225ENST00000638144 VCX2Q9H322 139 aa7.98□□□□□ -1.13
CLN6-225ENST00000638144 SMCO4Q9NRQ5 59 aa7.98□□□□□ -1.13
CLN6-225ENST00000638144 A0A096LNI7 61 aa7.97□□□□□ -1.13
CLN6-225ENST00000638144 A0A0J9YXV3 536 aa7.97□□□□□ -1.13
CLN6-225ENST00000638144 PMCHL1Q16048 86 aa7.97□□□□□ -1.13
CLN6-225ENST00000638144 SPACA4Q8TDM5 124 aa7.97□□□□□ -1.13
CLN6-225ENST00000638144 DPH3Q96FX2 82 aa7.97□□□□□ -1.13
CLN6-225ENST00000638144 URB1-AS1Q96HZ7 61 aa7.97□□□□□ -1.13
CLN6-225ENST00000638144 CAMK2N2Q96S95 79 aa7.97□□□□□ -1.13
CLN6-225ENST00000638144 A0A087WYN8 130 aa7.96□□□□□ -1.14
CLN6-225ENST00000638144 LINC01546A6NGU7 62 aa7.96□□□□□ -1.14
CLN6-225ENST00000638144 APOMO95445 188 aa7.96□□□□□ -1.14
CLN6-225ENST00000638144 INAFM2P0DMQ5 153 aa7.96□□□□□ -1.14
CLN6-225ENST00000638144 CIRBPQ14011 172 aaKnown RBP7.96□□□□□ -1.14
CLN6-225ENST00000638144 MAJINQ3KP22 176 aa7.96□□□□□ -1.14
CLN6-225ENST00000638144 TIMM17AQ99595 171 aa7.96□□□□□ -1.14
CLN6-225ENST00000638144 ERASQ7Z444 233 aa7.95□□□□□ -1.14
CLN6-225ENST00000638144 MYCBP2O75592 4640 aa7.94□□□□□ -1.14
CLN6-225ENST00000638144 A0A087WZ39 114 aa7.94□□□□□ -1.14
CLN6-225ENST00000638144 A0A096LNJ9 63 aa7.94□□□□□ -1.14
CLN6-225ENST00000638144 C10orf25Q5T742 122 aa7.94□□□□□ -1.14
CLN6-225ENST00000638144 OR10D4PQ8NGN7 298 aa7.94□□□□□ -1.14
CLN6-225ENST00000638144 PLA2G1BP04054 148 aaKnown RBP7.93□□□□□ -1.14
CLN6-225ENST00000638144 G0S2P27469 103 aa7.93□□□□□ -1.14
CLN6-225ENST00000638144 GAGE2BQ13066 116 aa7.93□□□□□ -1.14
CLN6-225ENST00000638144 C2orf48Q96LS8 159 aa7.93□□□□□ -1.14
CLN6-225ENST00000638144 DMBT1Q9UGM3 2413 aaPredicted RBP7.92□□□□□ -1.14
CLN6-225ENST00000638144 NPSP0C0P6 89 aa7.92□□□□□ -1.14
CLN6-225ENST00000638144 LINC00614P0C842 121 aa7.92□□□□□ -1.14
CLN6-225ENST00000638144 KRTAP10-4P60372 401 aaPredicted RBP7.92□□□□□ -1.14
CLN6-225ENST00000638144 RPL18AQ02543 176 aaKnown RBP7.92□□□□□ -1.14
CLN6-225ENST00000638144 PAPPA-AS1Q5QFB9 102 aa7.92□□□□□ -1.14
CLN6-225ENST00000638144 C2orf82Q6UX34 121 aa7.92□□□□□ -1.14
CLN6-225ENST00000638144 UNQ6190/PRO20217Q6UXQ8 127 aa7.92□□□□□ -1.14
CLN6-225ENST00000638144 STPG4Q8N801 248 aa7.92□□□□□ -1.14
CLN6-225ENST00000638144 CDKN2A-AS1Q9UH64 79 aa7.92□□□□□ -1.14
CLN6-225ENST00000638144 LOC107984640A0A0U1RRK4 108 aa7.91□□□□□ -1.14
CLN6-225ENST00000638144 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.91□□□□□ -1.14
CLN6-225ENST00000638144 NDUFA1O15239 70 aa7.91□□□□□ -1.14
CLN6-225ENST00000638144 RPL37AP61513 92 aaKnown RBP7.91□□□□□ -1.14
CLN6-225ENST00000638144 KIAA0087Q14695 138 aa7.91□□□□□ -1.14
CLN6-225ENST00000638144 GEMIN7Q9H840 131 aaKnown RBP7.91□□□□□ -1.14
CLN6-225ENST00000638144 TOMM7Q9P0U1 55 aa7.91□□□□□ -1.14
CLN6-225ENST00000638144 SCO1O75880 301 aa7.9□□□□□ -1.14
CLN6-225ENST00000638144 HBDP02042 147 aa7.9□□□□□ -1.14
CLN6-225ENST00000638144 PTTG1IPP53801 180 aa7.9□□□□□ -1.14
CLN6-225ENST00000638144 NDUFA6P56556 154 aa7.9□□□□□ -1.14
CLN6-225ENST00000638144 FAM19A3Q7Z5A8 133 aa7.9□□□□□ -1.14
CLN6-225ENST00000638144 LINC00469Q8N7U9 141 aa7.9□□□□□ -1.14
CLN6-225ENST00000638144 CST9LQ9H4G1 147 aa7.9□□□□□ -1.14
CLN6-225ENST00000638144 PLAC8Q9NZF1 115 aa7.9□□□□□ -1.14
CLN6-225ENST00000638144 C6orf48Q9UBA6 75 aa7.9□□□□□ -1.14
CLN6-225ENST00000638144 TRGC2P03986 189 aa7.89□□□□□ -1.15
CLN6-225ENST00000638144 HERVK_113P63121 156 aa7.89□□□□□ -1.15
CLN6-225ENST00000638144 PMVKQ15126 192 aa7.89□□□□□ -1.15
CLN6-225ENST00000638144 HNRNPA3P51991 378 aaKnown RBP7.88□□□□□ -1.15
CLN6-225ENST00000638144 C9orf116Q5BN46 136 aaPredicted RBP7.88□□□□□ -1.15
CLN6-225ENST00000638144 PACRGQ96M98 296 aaPredicted RBP7.88□□□□□ -1.15
CLN6-225ENST00000638144 MRPL35Q9NZE8 188 aaKnown RBP7.88□□□□□ -1.15
CLN6-225ENST00000638144 PKHD1L1Q86WI1 4243 aa7.87□□□□□ -1.15
CLN6-225ENST00000638144 LINC01549A6NIU2 74 aa7.87□□□□□ -1.15
CLN6-225ENST00000638144 PRSS2P07478 247 aa7.87□□□□□ -1.15
CLN6-225ENST00000638144 SPINK8P0C7L1 97 aa7.87□□□□□ -1.15
CLN6-225ENST00000638144 RAB5BP61020 215 aa7.87□□□□□ -1.15
CLN6-225ENST00000638144 SEC11AP67812 179 aa7.87□□□□□ -1.15
CLN6-225ENST00000638144 PDZD11Q5EBL8 140 aa7.87□□□□□ -1.15
CLN6-225ENST00000638144 TINCRA0A1B0GVN0 87 aa7.86□□□□□ -1.15
CLN6-225ENST00000638144 COLCA2A8K830 154 aa7.86□□□□□ -1.15
CLN6-225ENST00000638144 SMIM1B2RUZ4 78 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms