RNA–Protein interactions for RNA: ENST00000637769.1

CACNA1A-247, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-247ENST00000637769 SPRNQ5BIV9 151 aa13.46□□□□□ -0.25
CACNA1A-247ENST00000637769 IGKV2-28A0A075B6P5 120 aa13.46□□□□□ -0.26
CACNA1A-247ENST00000637769 IGKV2D-28P01615 120 aa13.46□□□□□ -0.26
CACNA1A-247ENST00000637769 SHISA2Q6UWI4 295 aa13.45□□□□□ -0.26
CACNA1A-247ENST00000637769 SLPIP03973 132 aa13.45□□□□□ -0.26
CACNA1A-247ENST00000637769 RPL28P46779 137 aaKnown RBP13.45□□□□□ -0.26
CACNA1A-247ENST00000637769 ADORA2A-AS1P86434 159 aa13.45□□□□□ -0.26
CACNA1A-247ENST00000637769 Q8N976 141 aa13.45□□□□□ -0.26
CACNA1A-247ENST00000637769 XAGE1AQ9HD64 81 aa13.45□□□□□ -0.26
CACNA1A-247ENST00000637769 COL27A1Q8IZC6 1860 aaPredicted RBP13.45□□□□□ -0.26
CACNA1A-247ENST00000637769 Q6ZQY7 126 aa13.45□□□□□ -0.26
CACNA1A-247ENST00000637769 TRBV7-6A0A0J9YX20 115 aa13.44□□□□□ -0.26
CACNA1A-247ENST00000637769 E7EUB6 86 aa13.44□□□□□ -0.26
CACNA1A-247ENST00000637769 WFDC13Q8IUB5 93 aa13.44□□□□□ -0.26
CACNA1A-247ENST00000637769 Q6YL49 198 aa13.43□□□□□ -0.26
CACNA1A-247ENST00000637769 Q8IZM0 81 aa13.43□□□□□ -0.26
CACNA1A-247ENST00000637769 P0C879 139 aa13.42□□□□□ -0.26
CACNA1A-247ENST00000637769 F8WDY8 70 aa13.42□□□□□ -0.26
CACNA1A-247ENST00000637769 USP24Q9UPU5 2620 aa13.42□□□□□ -0.26
CACNA1A-247ENST00000637769 MRPS12O15235 138 aaKnown RBP13.41□□□□□ -0.26
CACNA1A-247ENST00000637769 ZNF80P51504 273 aaPredicted RBP13.4□□□□□ -0.26
CACNA1A-247ENST00000637769 TP53TG3Q9ULZ0 132 aa13.4□□□□□ -0.26
CACNA1A-247ENST00000637769 SMIM11BQ8TCY0 68 aa13.4□□□□□ -0.26
CACNA1A-247ENST00000637769 EIF4EBP1Q13541 118 aaPredicted RBP13.39□□□□□ -0.27
CACNA1A-247ENST00000637769 C11orf1Q9H5F2 150 aa13.39□□□□□ -0.27
CACNA1A-247ENST00000637769 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.38□□□□□ -0.27
CACNA1A-247ENST00000637769 KPRPQ5T749 579 aaPredicted RBP13.38□□□□□ -0.27
CACNA1A-247ENST00000637769 DCANP1Q8TF63 244 aa13.38□□□□□ -0.27
CACNA1A-247ENST00000637769 ESRGQ1W209 222 aa13.37□□□□□ -0.27
CACNA1A-247ENST00000637769 FAM30AQ9NZY2 134 aa13.37□□□□□ -0.27
CACNA1A-247ENST00000637769 EBI3Q14213 229 aa13.37□□□□□ -0.27
CACNA1A-247ENST00000637769 RBX1P62877 108 aa13.37□□□□□ -0.27
CACNA1A-247ENST00000637769 SERTAD4-AS1Q5TG53 156 aa13.36□□□□□ -0.27
CACNA1A-247ENST00000637769 PLAC8L1A1L4L8 177 aa13.36□□□□□ -0.27
CACNA1A-247ENST00000637769 NTM-AS1Q6ZSK4 140 aa13.36□□□□□ -0.27
CACNA1A-247ENST00000637769 IGLV9-49A0A0B4J1Y8 123 aa13.36□□□□□ -0.27
CACNA1A-247ENST00000637769 IGLV2-8P01709 118 aa13.35□□□□□ -0.27
CACNA1A-247ENST00000637769 CHCHD7Q9BUK0 85 aa13.35□□□□□ -0.27
CACNA1A-247ENST00000637769 PLA2G2EQ9NZK7 142 aa13.34□□□□□ -0.27
CACNA1A-247ENST00000637769 DEFB1P60022 68 aa13.34□□□□□ -0.27
CACNA1A-247ENST00000637769 TSHBP01222 138 aa13.33□□□□□ -0.28
CACNA1A-247ENST00000637769 CNFNQ9BYD5 112 aa13.33□□□□□ -0.28
CACNA1A-247ENST00000637769 IGHV4-30-4P0DP06 118 aa13.32□□□□□ -0.28
CACNA1A-247ENST00000637769 IGHV4-31P0DP07 118 aa13.32□□□□□ -0.28
CACNA1A-247ENST00000637769 GDF5OSQ5U4N7 250 aa13.32□□□□□ -0.28
CACNA1A-247ENST00000637769 REG3GQ6UW15 175 aa13.32□□□□□ -0.28
CACNA1A-247ENST00000637769 CSDC2Q9Y534 153 aaKnown RBP13.32□□□□□ -0.28
CACNA1A-247ENST00000637769 MBD6Q96DN6 1003 aa13.32□□□□□ -0.28
CACNA1A-247ENST00000637769 HRCT1Q6UXD1 115 aa13.31□□□□□ -0.28
CACNA1A-247ENST00000637769 CHD8Q9HCK8 2581 aa13.31□□□□□ -0.28
CACNA1A-247ENST00000637769 C22orf34Q6ZV56 151 aa13.31□□□□□ -0.28
CACNA1A-247ENST00000637769 NUPR2A6NF83 97 aa13.31□□□□□ -0.28
CACNA1A-247ENST00000637769 Q8N814 137 aa13.31□□□□□ -0.28
CACNA1A-247ENST00000637769 LIMD2Q9BT23 127 aa13.31□□□□□ -0.28
CACNA1A-247ENST00000637769 C1orf137Q5JT78 98 aa13.3□□□□□ -0.28
CACNA1A-247ENST00000637769 LINC00694P0DN24 101 aa13.3□□□□□ -0.28
CACNA1A-247ENST00000637769 CCDC179H3BU77 68 aa13.29□□□□□ -0.28
CACNA1A-247ENST00000637769 LINC00959A0A1B0GUT2 108 aa13.29□□□□□ -0.28
CACNA1A-247ENST00000637769 hDV103S1A0JD37 113 aa13.29□□□□□ -0.28
CACNA1A-247ENST00000637769 LMO4P61968 165 aa13.29□□□□□ -0.28
CACNA1A-247ENST00000637769 ZNF843Q8N446 348 aa13.29□□□□□ -0.28
CACNA1A-247ENST00000637769 PSMG3-AS1Q96PY0 264 aa13.29□□□□□ -0.28
CACNA1A-247ENST00000637769 KLLNB2CW77 178 aa13.29□□□□□ -0.28
CACNA1A-247ENST00000637769 LINC00526Q96FQ7 95 aa13.29□□□□□ -0.28
CACNA1A-247ENST00000637769 CELA1Q9UNI1 258 aa13.29□□□□□ -0.28
CACNA1A-247ENST00000637769 LINC00208Q96KT6 92 aa13.29□□□□□ -0.28
CACNA1A-247ENST00000637769 MAPKAPK5-AS1Q8N8E1 139 aa13.28□□□□□ -0.28
CACNA1A-247ENST00000637769 EGFEM1PQ0D2K5 195 aa13.28□□□□□ -0.28
CACNA1A-247ENST00000637769 LOC100131303A0A0U1RQF7 123 aa13.27□□□□□ -0.28
CACNA1A-247ENST00000637769 PPDPFQ9H3Y8 114 aa13.27□□□□□ -0.28
CACNA1A-247ENST00000637769 C2orf91Q6ZV80 131 aa13.27□□□□□ -0.29
CACNA1A-247ENST00000637769 FRMD6-AS1P0C7T7 363 aa13.26□□□□□ -0.29
CACNA1A-247ENST00000637769 PCSK5Q92824 1860 aa13.25□□□□□ -0.29
CACNA1A-247ENST00000637769 RPL37AP8A6NKH3 93 aa13.25□□□□□ -0.29
CACNA1A-247ENST00000637769 NRGNQ92686 78 aa13.25□□□□□ -0.29
CACNA1A-247ENST00000637769 LINC01547P58512 204 aaPredicted RBP13.25□□□□□ -0.29
CACNA1A-247ENST00000637769 YPEL4Q96NS1 127 aa13.24□□□□□ -0.29
CACNA1A-247ENST00000637769 BBC3Q96PG8 261 aaPredicted RBP13.24□□□□□ -0.29
CACNA1A-247ENST00000637769 CIRBP-AS1Q8TBR5 109 aa13.24□□□□□ -0.29
CACNA1A-247ENST00000637769 M0QXV9 152 aa13.24□□□□□ -0.29
CACNA1A-247ENST00000637769 FSHBP01225 129 aa13.22□□□□□ -0.29
CACNA1A-247ENST00000637769 CRIP1P50238 77 aa13.22□□□□□ -0.29
CACNA1A-247ENST00000637769 CDC42SE2Q9NRR3 84 aa13.22□□□□□ -0.29
CACNA1A-247ENST00000637769 TRBV7-7A0A0K0K1E9 115 aa13.22□□□□□ -0.29
CACNA1A-247ENST00000637769 CXCL6P80162 114 aa13.22□□□□□ -0.29
CACNA1A-247ENST00000637769 CLUHP3Q96NS8 147 aa13.22□□□□□ -0.29
CACNA1A-247ENST00000637769 RNASE3P12724 160 aaKnown RBP13.21□□□□□ -0.29
CACNA1A-247ENST00000637769 POLR2KP53803 58 aaKnown RBP13.21□□□□□ -0.29
CACNA1A-247ENST00000637769 H0Y9P7 68 aa13.21□□□□□ -0.3
CACNA1A-247ENST00000637769 XGP55808 180 aa13.21□□□□□ -0.3
CACNA1A-247ENST00000637769 CYSRT1A8MQ03 144 aa13.21□□□□□ -0.3
CACNA1A-247ENST00000637769 PRORYQ9H606 182 aa13.2□□□□□ -0.3
CACNA1A-247ENST00000637769 IGLV2-11P01706 119 aa13.2□□□□□ -0.3
CACNA1A-247ENST00000637769 X6R8D5 127 aa13.19□□□□□ -0.3
CACNA1A-247ENST00000637769 Q8N3U1 123 aa13.19□□□□□ -0.3
CACNA1A-247ENST00000637769 TP53AIP1Q9HCN2 124 aa13.19□□□□□ -0.3
CACNA1A-247ENST00000637769 FASNP49327 2511 aaKnown RBP13.18□□□□□ -0.3
CACNA1A-247ENST00000637769 IGHV6-1A0A0B4J1U7 121 aa13.18□□□□□ -0.3
CACNA1A-247ENST00000637769 NANOS2P60321 138 aaKnown RBP13.17□□□□□ -0.3
CACNA1A-247ENST00000637769 HCG22E2RYF7 251 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms