RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 IMMP2LQ96T52 175 aa11.96□□□□□ -0.49
CLN6-213ENST00000636212 LOC107984640A0A0U1RRK4 108 aa11.95□□□□□ -0.5
CLN6-213ENST00000636212 RHEBQ15382 184 aa11.95□□□□□ -0.5
CLN6-213ENST00000636212 PRELID3AQ96N28 172 aa11.95□□□□□ -0.5
CLN6-213ENST00000636212 C2orf48Q96LS8 159 aa11.94□□□□□ -0.5
CLN6-213ENST00000636212 IFITM10A6NMD0 228 aa11.93□□□□□ -0.5
CLN6-213ENST00000636212 IFI27P40305 119 aaPredicted RBP11.93□□□□□ -0.5
CLN6-213ENST00000636212 MRPS36P82909 103 aaKnown RBP11.93□□□□□ -0.5
CLN6-213ENST00000636212 LAMTOR2Q9Y2Q5 125 aa11.93□□□□□ -0.5
CLN6-213ENST00000636212 TRAV9-1A0A075B6T8 112 aa11.92□□□□□ -0.5
CLN6-213ENST00000636212 SPAG11BQ08648 103 aa11.92□□□□□ -0.5
CLN6-213ENST00000636212 GAGE2BQ13066 116 aa11.92□□□□□ -0.5
CLN6-213ENST00000636212 NDUFA5Q16718 116 aa11.92□□□□□ -0.5
CLN6-213ENST00000636212 OR10D4PQ8NGN7 298 aa11.92□□□□□ -0.5
CLN6-213ENST00000636212 PTTG1IPP53801 180 aa11.91□□□□□ -0.5
CLN6-213ENST00000636212 MAP1LC3AQ9H492 121 aa11.91□□□□□ -0.5
CLN6-213ENST00000636212 TGIF2-C20orf24A0A0A6YYL0 155 aa11.89□□□□□ -0.51
CLN6-213ENST00000636212 F8WDY8 70 aa11.89□□□□□ -0.51
CLN6-213ENST00000636212 S100PP25815 95 aa11.89□□□□□ -0.51
CLN6-213ENST00000636212 PRR3P79522 188 aaKnown RBP11.89□□□□□ -0.51
CLN6-213ENST00000636212 ORAOV1Q8WV07 137 aa11.89□□□□□ -0.51
CLN6-213ENST00000636212 OPRPNQ99935 248 aaPredicted RBP11.89□□□□□ -0.51
CLN6-213ENST00000636212 LOC389332A0A1B0GUA5 103 aa11.88□□□□□ -0.51
CLN6-213ENST00000636212 APOC3P02656 99 aa11.88□□□□□ -0.51
CLN6-213ENST00000636212 RPL18AQ02543 176 aaKnown RBP11.88□□□□□ -0.51
CLN6-213ENST00000636212 SVBPQ8N300 66 aa11.88□□□□□ -0.51
CLN6-213ENST00000636212 PYGO1Q9Y3Y4 419 aa11.88□□□□□ -0.51
CLN6-213ENST00000636212 PRSS47A8MTI9 375 aa11.87□□□□□ -0.51
CLN6-213ENST00000636212 RNF151Q2KHN1 245 aa11.87□□□□□ -0.51
CLN6-213ENST00000636212 IGHV3OR16-9A0A0B4J2B5 98 aa11.86□□□□□ -0.51
CLN6-213ENST00000636212 SNAPINO95295 136 aa11.86□□□□□ -0.51
CLN6-213ENST00000636212 Q6ZRP5 223 aa11.86□□□□□ -0.51
CLN6-213ENST00000636212 TMEM141Q96I45 108 aa11.86□□□□□ -0.51
CLN6-213ENST00000636212 RPS10P5Q9NQ39 176 aa11.86□□□□□ -0.51
CLN6-213ENST00000636212 NDUFA1O15239 70 aa11.85□□□□□ -0.51
CLN6-213ENST00000636212 Q6ZN92 141 aa11.85□□□□□ -0.51
CLN6-213ENST00000636212 TEX43Q6ZNM6 134 aa11.85□□□□□ -0.51
CLN6-213ENST00000636212 FAM104AQ969W3 186 aa11.85□□□□□ -0.51
CLN6-213ENST00000636212 C2orf88Q9BSF0 95 aa11.85□□□□□ -0.51
CLN6-213ENST00000636212 PLA2G2DQ9UNK4 145 aa11.85□□□□□ -0.51
CLN6-213ENST00000636212 CYSLTR1Q9Y271 337 aa11.85□□□□□ -0.51
CLN6-213ENST00000636212 LRP1Q07954 4544 aaKnown RBP11.85□□□□□ -0.51
CLN6-213ENST00000636212 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.84□□□□□ -0.51
CLN6-213ENST00000636212 ORMDL2Q53FV1 153 aa11.84□□□□□ -0.51
CLN6-213ENST00000636212 Q8N8P6 123 aa11.84□□□□□ -0.51
CLN6-213ENST00000636212 MRPL35Q9NZE8 188 aaKnown RBP11.84□□□□□ -0.51
CLN6-213ENST00000636212 IGLV4-3A0A075B6K6 122 aa11.83□□□□□ -0.52
CLN6-213ENST00000636212 K7EMI3 77 aa11.83□□□□□ -0.52
CLN6-213ENST00000636212 G0S2P27469 103 aa11.82□□□□□ -0.52
CLN6-213ENST00000636212 COX19Q49B96 90 aa11.82□□□□□ -0.52
CLN6-213ENST00000636212 SPINK6Q6UWN8 80 aa11.82□□□□□ -0.52
CLN6-213ENST00000636212 C2orf66Q6UXQ4 117 aa11.82□□□□□ -0.52
CLN6-213ENST00000636212 A0A0J9YXV3 536 aa11.81□□□□□ -0.52
CLN6-213ENST00000636212 REG3GQ6UW15 175 aa11.81□□□□□ -0.52
CLN6-213ENST00000636212 NXT2Q9NPJ8 142 aaKnown RBP11.81□□□□□ -0.52
CLN6-213ENST00000636212 FAT3Q8TDW7 4589 aa11.8□□□□□ -0.52
CLN6-213ENST00000636212 A0A087WZ39 114 aa11.8□□□□□ -0.52
CLN6-213ENST00000636212 C9orf116Q5BN46 136 aaPredicted RBP11.8□□□□□ -0.52
CLN6-213ENST00000636212 LINC00242Q5T6M2 205 aa11.8□□□□□ -0.52
CLN6-213ENST00000636212 VCX2Q9H322 139 aa11.8□□□□□ -0.52
CLN6-213ENST00000636212 PKHD1L1Q86WI1 4243 aa11.79□□□□□ -0.52
CLN6-213ENST00000636212 A0A1W2PNN7 141 aa11.79□□□□□ -0.52
CLN6-213ENST00000636212 MT-ND6P03923 174 aa11.79□□□□□ -0.52
CLN6-213ENST00000636212 NPSP0C0P6 89 aa11.79□□□□□ -0.52
CLN6-213ENST00000636212 MT1HL1P0DM35 61 aa11.79□□□□□ -0.52
CLN6-213ENST00000636212 PAPPA-AS1Q5QFB9 102 aa11.79□□□□□ -0.52
CLN6-213ENST00000636212 GNB1LQ9BYB4 327 aa11.79□□□□□ -0.52
CLN6-213ENST00000636212 UBE2D1P51668 147 aa11.77□□□□□ -0.53
CLN6-213ENST00000636212 UNQ6190/PRO20217Q6UXQ8 127 aa11.77□□□□□ -0.53
CLN6-213ENST00000636212 LINC01600Q96MT4 127 aa11.77□□□□□ -0.53
CLN6-213ENST00000636212 PRSS2P07478 247 aa11.76□□□□□ -0.53
CLN6-213ENST00000636212 SLC7A5P1Q8MH63 180 aa11.76□□□□□ -0.53
CLN6-213ENST00000636212 LINC01561Q8N1V8 128 aa11.76□□□□□ -0.53
CLN6-213ENST00000636212 PACRGQ96M98 296 aaPredicted RBP11.76□□□□□ -0.53
CLN6-213ENST00000636212 TLX1NBP0CAT3 122 aa11.75□□□□□ -0.53
CLN6-213ENST00000636212 SEC11AP67812 179 aa11.75□□□□□ -0.53
CLN6-213ENST00000636212 C10orf25Q5T742 122 aa11.75□□□□□ -0.53
CLN6-213ENST00000636212 TRBV30A0A0K0K1B3 111 aa11.74□□□□□ -0.53
CLN6-213ENST00000636212 GAGE2EQ4V326 116 aa11.74□□□□□ -0.53
CLN6-213ENST00000636212 AMELXQ99217 191 aa11.74□□□□□ -0.53
CLN6-213ENST00000636212 C6orf48Q9UBA6 75 aa11.74□□□□□ -0.53
CLN6-213ENST00000636212 GAGE2DQ9UEU5 116 aa11.74□□□□□ -0.53
CLN6-213ENST00000636212 PHF5AQ7RTV0 110 aaKnown RBP11.73□□□□□ -0.53
CLN6-213ENST00000636212 IGIPA6NJ69 53 aa11.72□□□□□ -0.53
CLN6-213ENST00000636212 CKS1BP61024 79 aa11.72□□□□□ -0.53
CLN6-213ENST00000636212 SRSF9Q13242 221 aaKnown RBP eCLIP11.72□□□□□ -0.53
CLN6-213ENST00000636212 KIAA0087Q14695 138 aa11.72□□□□□ -0.53
CLN6-213ENST00000636212 KIAA1644Q3SXP7 199 aa11.72□□□□□ -0.53
CLN6-213ENST00000636212 PSORS1C2Q9UIG4 136 aa11.72□□□□□ -0.53
CLN6-213ENST00000636212 HERVK_113P63121 156 aa11.71□□□□□ -0.53
CLN6-213ENST00000636212 C1orf137Q5JT78 98 aa11.71□□□□□ -0.53
CLN6-213ENST00000636212 ZC2HC1BQ5TFG8 222 aa11.71□□□□□ -0.53
CLN6-213ENST00000636212 LINC00173Q6ZV60 143 aa11.71□□□□□ -0.53
CLN6-213ENST00000636212 TIMM17AQ99595 171 aa11.71□□□□□ -0.53
CLN6-213ENST00000636212 MRPL18Q9H0U6 180 aaKnown RBP11.71□□□□□ -0.53
CLN6-213ENST00000636212 GEMIN7Q9H840 131 aaKnown RBP11.71□□□□□ -0.53
CLN6-213ENST00000636212 TOMM7Q9P0U1 55 aa11.71□□□□□ -0.53
CLN6-213ENST00000636212 LINC01549A6NIU2 74 aa11.7□□□□□ -0.54
CLN6-213ENST00000636212 C6orf226Q5I0X4 101 aa11.7□□□□□ -0.54
CLN6-213ENST00000636212 C2orf82Q6UX34 121 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms