RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	CCDC179	H3BU77	68 aa		10.47	□□□□□ -0.73
NEDD4L-238	ENST00000635997	NANOS2	P60321	138 aa	Known RBP	10.47	□□□□□ -0.73
NEDD4L-238	ENST00000635997	FRYL	O94915	3013 aa		10.47	□□□□□ -0.73
NEDD4L-238	ENST00000635997	LYRM9	A8MSI8	78 aa		10.47	□□□□□ -0.73
NEDD4L-238	ENST00000635997		A8MZ25	164 aa		10.47	□□□□□ -0.73
NEDD4L-238	ENST00000635997	SOCS3	O14543	225 aa		10.47	□□□□□ -0.73
NEDD4L-238	ENST00000635997	NCR3	O14931	201 aa		10.47	□□□□□ -0.73
NEDD4L-238	ENST00000635997	RPL32	P62910	135 aa	Known RBP	10.47	□□□□□ -0.73
NEDD4L-238	ENST00000635997	REV3L	O60673	3130 aa		10.46	□□□□□ -0.73
NEDD4L-238	ENST00000635997	OVOL2	Q9BRP0	275 aa		10.46	□□□□□ -0.73
NEDD4L-238	ENST00000635997	CDK2AP2	O75956	126 aa		10.46	□□□□□ -0.74
NEDD4L-238	ENST00000635997	TCL1B	O95988	128 aa		10.46	□□□□□ -0.74
NEDD4L-238	ENST00000635997	ETDC	A0A1B0GVM5	59 aa		10.46	□□□□□ -0.74
NEDD4L-238	ENST00000635997	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	10.45	□□□□□ -0.74
NEDD4L-238	ENST00000635997	MRPS12	O15235	138 aa	Known RBP	10.45	□□□□□ -0.74
NEDD4L-238	ENST00000635997	IGHV1-58	A0A0C4DH39	117 aa		10.45	□□□□□ -0.74
NEDD4L-238	ENST00000635997	CRYGD	P07320	174 aa		10.45	□□□□□ -0.74
NEDD4L-238	ENST00000635997	IGLV1-51	P01701	117 aa		10.45	□□□□□ -0.74
NEDD4L-238	ENST00000635997	FAM236A	A0A1B0GUQ0	79 aa		10.44	□□□□□ -0.74
NEDD4L-238	ENST00000635997	FAM236B	A0A1B0GV22	79 aa		10.44	□□□□□ -0.74
NEDD4L-238	ENST00000635997	TIRAP	P58753	221 aa		10.44	□□□□□ -0.74
NEDD4L-238	ENST00000635997	MRGPRG-AS1	Q2M3A8	158 aa		10.44	□□□□□ -0.74
NEDD4L-238	ENST00000635997	WWC2-AS2	Q96NR7	200 aa		10.44	□□□□□ -0.74
NEDD4L-238	ENST00000635997	IGLV4-3	A0A075B6K6	122 aa		10.44	□□□□□ -0.74
NEDD4L-238	ENST00000635997	TRBV6-8	A0A0A6YYG3	113 aa		10.44	□□□□□ -0.74
NEDD4L-238	ENST00000635997	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	10.44	□□□□□ -0.74
NEDD4L-238	ENST00000635997	XAGE1A	Q9HD64	81 aa		10.44	□□□□□ -0.74
NEDD4L-238	ENST00000635997	BAALC-AS2	P0C853	105 aa		10.42	□□□□□ -0.74
NEDD4L-238	ENST00000635997	KPRP	Q5T749	579 aa	Predicted RBP	10.42	□□□□□ -0.74
NEDD4L-238	ENST00000635997	BOD1L1	Q8NFC6	3051 aa		10.42	□□□□□ -0.74
NEDD4L-238	ENST00000635997	TNRC18	O15417	2968 aa	Predicted RBP	10.41	□□□□□ -0.74
NEDD4L-238	ENST00000635997	FRY	Q5TBA9	3013 aa		10.41	□□□□□ -0.74
NEDD4L-238	ENST00000635997	LINC01620	Q4KN68	170 aa		10.41	□□□□□ -0.74
NEDD4L-238	ENST00000635997	INAFM2	P0DMQ5	153 aa		10.4	□□□□□ -0.74
NEDD4L-238	ENST00000635997	TRBV6-4	A0A1B0GX49	114 aa		10.4	□□□□□ -0.74
NEDD4L-238	ENST00000635997	ZNF22	P17026	224 aa	Predicted RBP	10.4	□□□□□ -0.75
NEDD4L-238	ENST00000635997	NRAC	Q8N912	160 aa		10.4	□□□□□ -0.75
NEDD4L-238	ENST00000635997	DSCR8	Q96T75	97 aa		10.39	□□□□□ -0.75
NEDD4L-238	ENST00000635997	NFE4	Q86UQ8	179 aa		10.39	□□□□□ -0.75
NEDD4L-238	ENST00000635997	TEX49	A0A1B0GTD5	131 aa		10.39	□□□□□ -0.75
NEDD4L-238	ENST00000635997	CLEC2B	Q92478	149 aa		10.39	□□□□□ -0.75
NEDD4L-238	ENST00000635997	TRBV27	A0A0K0K1C4	114 aa		10.38	□□□□□ -0.75
NEDD4L-238	ENST00000635997	TACC2	O95359	2948 aa		10.38	□□□□□ -0.75
NEDD4L-238	ENST00000635997	TRAC	P01848	142 aa		10.38	□□□□□ -0.75
NEDD4L-238	ENST00000635997	PKIG	Q9Y2B9	76 aa		10.38	□□□□□ -0.75
NEDD4L-238	ENST00000635997	PIK3CD-AS1	Q5SR53	167 aa		10.38	□□□□□ -0.75
NEDD4L-238	ENST00000635997		A0A096LNI7	61 aa		10.37	□□□□□ -0.75
NEDD4L-238	ENST00000635997	CRIP2	P52943	208 aa	Predicted RBP	10.37	□□□□□ -0.75
NEDD4L-238	ENST00000635997	C1orf158	Q8N1D5	194 aa		10.37	□□□□□ -0.75
NEDD4L-238	ENST00000635997	MUC7	Q8TAX7	377 aa		10.37	□□□□□ -0.75
NEDD4L-238	ENST00000635997	C9orf85	Q96MD7	179 aa		10.37	□□□□□ -0.75
NEDD4L-238	ENST00000635997	UBR5	O95071	2799 aa	Predicted RBP	10.37	□□□□□ -0.75
NEDD4L-238	ENST00000635997		A0A0J9YXY3	114 aa		10.37	□□□□□ -0.75
NEDD4L-238	ENST00000635997	UBL5	Q9BZL1	73 aa		10.36	□□□□□ -0.75
NEDD4L-238	ENST00000635997	TSHB	P01222	138 aa		10.36	□□□□□ -0.75
NEDD4L-238	ENST00000635997	hADV29S1	A0JD25	119 aa		10.36	□□□□□ -0.75
NEDD4L-238	ENST00000635997	POLR2K	P53803	58 aa	Known RBP	10.36	□□□□□ -0.75
NEDD4L-238	ENST00000635997	FLNC	Q14315	2725 aa		10.35	□□□□□ -0.75
NEDD4L-238	ENST00000635997		M0QXV9	152 aa		10.35	□□□□□ -0.75
NEDD4L-238	ENST00000635997	SPEG	Q15772	3267 aa		10.35	□□□□□ -0.75
NEDD4L-238	ENST00000635997	HIGD2A	Q9BW72	106 aa		10.35	□□□□□ -0.75
NEDD4L-238	ENST00000635997	ORMDL1	Q9P0S3	153 aa		10.35	□□□□□ -0.75
NEDD4L-238	ENST00000635997		J3KT08	172 aa		10.34	□□□□□ -0.75
NEDD4L-238	ENST00000635997	UBE2A	P49459	152 aa		10.33	□□□□□ -0.76
NEDD4L-238	ENST00000635997	C14orf177	Q52M58	125 aa		10.33	□□□□□ -0.76
NEDD4L-238	ENST00000635997		A0A096LNJ9	63 aa		10.32	□□□□□ -0.76
NEDD4L-238	ENST00000635997	TRBV6-5	A0A0K0K1A5	114 aa		10.32	□□□□□ -0.76
NEDD4L-238	ENST00000635997	CXCL5	P42830	114 aa		10.32	□□□□□ -0.76
NEDD4L-238	ENST00000635997		Q6ZTC4	211 aa		10.32	□□□□□ -0.76
NEDD4L-238	ENST00000635997	CDIP1	Q9H305	208 aa		10.32	□□□□□ -0.76
NEDD4L-238	ENST00000635997	ATM	Q13315	3056 aa		10.32	□□□□□ -0.76
NEDD4L-238	ENST00000635997	LRCOL1	A6NCL2	159 aa		10.32	□□□□□ -0.76
NEDD4L-238	ENST00000635997	EYS	Q5T1H1	3165 aa		10.31	□□□□□ -0.76
NEDD4L-238	ENST00000635997	KRTAP1-3	Q8IUG1	177 aa		10.31	□□□□□ -0.76
NEDD4L-238	ENST00000635997	TRBV10-2	A0A0K0K1G8	114 aa		10.31	□□□□□ -0.76
NEDD4L-238	ENST00000635997		Q8N2B8	174 aa		10.31	□□□□□ -0.76
NEDD4L-238	ENST00000635997	DMXL2	Q8TDJ6	3036 aa		10.3	□□□□□ -0.76
NEDD4L-238	ENST00000635997		H0YGX0	51 aa		10.3	□□□□□ -0.76
NEDD4L-238	ENST00000635997	FHL3	Q13643	280 aa		10.3	□□□□□ -0.76
NEDD4L-238	ENST00000635997	C5orf47	Q569G3	176 aa		10.3	□□□□□ -0.76
NEDD4L-238	ENST00000635997	B9D2	Q9BPU9	175 aa		10.3	□□□□□ -0.76
NEDD4L-238	ENST00000635997	FSHB	P01225	129 aa		10.29	□□□□□ -0.76
NEDD4L-238	ENST00000635997	MIA	Q16674	131 aa		10.28	□□□□□ -0.76
NEDD4L-238	ENST00000635997	COL12A1	Q99715	3063 aa		10.28	□□□□□ -0.76
NEDD4L-238	ENST00000635997	TMEM223	A0PJW6	202 aa		10.28	□□□□□ -0.76
NEDD4L-238	ENST00000635997	SBSPON	Q8IVN8	264 aa		10.28	□□□□□ -0.76
NEDD4L-238	ENST00000635997	DIRC1	Q969H9	104 aa		10.28	□□□□□ -0.76
NEDD4L-238	ENST00000635997	IGKV3D-7	A0A0C4DH55	119 aa		10.28	□□□□□ -0.76
NEDD4L-238	ENST00000635997	CNFN	Q9BYD5	112 aa		10.28	□□□□□ -0.76
NEDD4L-238	ENST00000635997		A0A1B0GX51	115 aa		10.27	□□□□□ -0.77
NEDD4L-238	ENST00000635997	UBE2D4	Q9Y2X8	147 aa		10.27	□□□□□ -0.77
NEDD4L-238	ENST00000635997	ZZEF1	O43149	2961 aa		10.27	□□□□□ -0.77
NEDD4L-238	ENST00000635997		A0A087WZ39	114 aa		10.27	□□□□□ -0.77
NEDD4L-238	ENST00000635997		A0A096LNT2	108 aa		10.27	□□□□□ -0.77
NEDD4L-238	ENST00000635997	UBE2D3	P61077	147 aa		10.27	□□□□□ -0.77
NEDD4L-238	ENST00000635997	UBE2D2	P62837	147 aa		10.27	□□□□□ -0.77
NEDD4L-238	ENST00000635997	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	10.27	□□□□□ -0.77
NEDD4L-238	ENST00000635997	SPANXC	Q9NY87	97 aa		10.27	□□□□□ -0.77
NEDD4L-238	ENST00000635997	ZNF580	Q9UK33	172 aa		10.27	□□□□□ -0.77
NEDD4L-238	ENST00000635997	LINC00959	A0A1B0GUT2	108 aa		10.26	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms