RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 IFITM1P13164 125 aa3.87□□□□□ -1.79
NEK3-211ENST00000629912 RPL24P83731 157 aaKnown RBP3.87□□□□□ -1.79
NEK3-211ENST00000629912 OXLD1Q5BKU9 147 aa3.87□□□□□ -1.79
NEK3-211ENST00000629912 PRIMA1Q86XR5 153 aa3.87□□□□□ -1.79
NEK3-211ENST00000629912 MUSTN1Q8IVN3 82 aa3.87□□□□□ -1.79
NEK3-211ENST00000629912 LINC01561Q8N1V8 128 aa3.87□□□□□ -1.79
NEK3-211ENST00000629912 LITAFQ99732 161 aa3.87□□□□□ -1.79
NEK3-211ENST00000629912 CHCHD5Q9BSY4 110 aa3.87□□□□□ -1.79
NEK3-211ENST00000629912 TRRAPQ9Y4A5 3859 aa3.87□□□□□ -1.79
NEK3-211ENST00000629912 DNAH3Q8TD57 4116 aa3.87□□□□□ -1.79
NEK3-211ENST00000629912 NBEAL2Q6ZNJ1 2754 aa3.86□□□□□ -1.79
NEK3-211ENST00000629912 IGLV4-60A0A075B6I1 120 aa3.86□□□□□ -1.79
NEK3-211ENST00000629912 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.86□□□□□ -1.79
NEK3-211ENST00000629912 IGHV3OR16-9A0A0B4J2B5 98 aa3.86□□□□□ -1.79
NEK3-211ENST00000629912 LINC00959A0A1B0GUT2 108 aa3.86□□□□□ -1.79
NEK3-211ENST00000629912 SMIM1B2RUZ4 78 aa3.86□□□□□ -1.79
NEK3-211ENST00000629912 HERV-K104P63124 156 aa3.86□□□□□ -1.79
NEK3-211ENST00000629912 CIRBPQ14011 172 aaKnown RBP3.86□□□□□ -1.79
NEK3-211ENST00000629912 MRPL23Q16540 153 aaKnown RBP3.86□□□□□ -1.79
NEK3-211ENST00000629912 PPDPFQ9H3Y8 114 aa3.86□□□□□ -1.79
NEK3-211ENST00000629912 PRO1854Q9UHT4 67 aa3.86□□□□□ -1.79
NEK3-211ENST00000629912 CELA1Q9UNI1 258 aa3.86□□□□□ -1.79
NEK3-211ENST00000629912 SPCS1Q9Y6A9 102 aa3.86□□□□□ -1.79
NEK3-211ENST00000629912 A0A087WZ39 114 aa3.85□□□□□ -1.79
NEK3-211ENST00000629912 A0A0B4J2C4 111 aa3.85□□□□□ -1.79
NEK3-211ENST00000629912 A4D1N5 150 aa3.85□□□□□ -1.79
NEK3-211ENST00000629912 CYSRT1A8MQ03 144 aa3.85□□□□□ -1.79
NEK3-211ENST00000629912 H3BNG1 76 aa3.85□□□□□ -1.79
NEK3-211ENST00000629912 DEFB4AO15263 64 aa3.85□□□□□ -1.79
NEK3-211ENST00000629912 RBX1P62877 108 aa3.85□□□□□ -1.79
NEK3-211ENST00000629912 MIAQ16674 131 aa3.85□□□□□ -1.79
NEK3-211ENST00000629912 ADAMTSL4-AS1Q5T5F5 129 aa3.85□□□□□ -1.79
NEK3-211ENST00000629912 ZNF625Q96I27 306 aaPredicted RBP3.85□□□□□ -1.79
NEK3-211ENST00000629912 NAA38Q9BRA0 125 aaKnown RBP3.85□□□□□ -1.79
NEK3-211ENST00000629912 FBN1P35555 2871 aaKnown RBP3.84□□□□□ -1.79
NEK3-211ENST00000629912 TMEM262E9PQX1 116 aa3.84□□□□□ -1.79
NEK3-211ENST00000629912 APOMO95445 188 aa3.84□□□□□ -1.79
NEK3-211ENST00000629912 IGHV3-33P01772 117 aa3.84□□□□□ -1.79
NEK3-211ENST00000629912 PRSS2P07478 247 aa3.84□□□□□ -1.79
NEK3-211ENST00000629912 SS18Q15532 418 aa3.84□□□□□ -1.79
NEK3-211ENST00000629912 LELP1Q5T871 98 aa3.84□□□□□ -1.79
NEK3-211ENST00000629912 SFTA2Q6UW10 78 aa3.84□□□□□ -1.79
NEK3-211ENST00000629912 COPS9Q8WXC6 57 aa3.84□□□□□ -1.79
NEK3-211ENST00000629912 C11orf68Q9H3H3 251 aaKnown RBP3.84□□□□□ -1.79
NEK3-211ENST00000629912 Q9H8V8 135 aa3.84□□□□□ -1.79
NEK3-211ENST00000629912 PGPEP1Q9NXJ5 209 aa3.84□□□□□ -1.79
NEK3-211ENST00000629912 ICOSQ9Y6W8 199 aa3.84□□□□□ -1.79
NEK3-211ENST00000629912 TRBV20-1A0A075B6N2 111 aa3.83□□□□□ -1.8
NEK3-211ENST00000629912 A0A096LPF7 62 aa3.83□□□□□ -1.8
NEK3-211ENST00000629912 F8W1H4 67 aa3.83□□□□□ -1.8
NEK3-211ENST00000629912 EIF4EBP3O60516 100 aaPredicted RBP3.83□□□□□ -1.8
NEK3-211ENST00000629912 TSPAN13O95857 204 aa3.83□□□□□ -1.8
NEK3-211ENST00000629912 LYRM7Q5U5X0 104 aa3.83□□□□□ -1.8
NEK3-211ENST00000629912 COX7B2Q8TF08 81 aa3.83□□□□□ -1.8
NEK3-211ENST00000629912 ERG28Q9UKR5 140 aa3.83□□□□□ -1.8
NEK3-211ENST00000629912 BAHCC1Q9P281 2608 aa3.82□□□□□ -1.8
NEK3-211ENST00000629912 TRBV30A0A0K0K1B3 111 aa3.82□□□□□ -1.8
NEK3-211ENST00000629912 G3V4G9 280 aa3.82□□□□□ -1.8
NEK3-211ENST00000629912 CD164L2Q6UWJ8 174 aa3.82□□□□□ -1.8
NEK3-211ENST00000629912 LYPD5Q6UWN5 251 aa3.82□□□□□ -1.8
NEK3-211ENST00000629912 LINC00308Q8TCZ7 52 aa3.82□□□□□ -1.8
NEK3-211ENST00000629912 STAB1Q9NY15 2570 aa3.81□□□□□ -1.8
NEK3-211ENST00000629912 IGKV3OR2-268A0A0C4DH90 116 aa3.81□□□□□ -1.8
NEK3-211ENST00000629912 IBA57-AS1B1ANH7 110 aa3.81□□□□□ -1.8
NEK3-211ENST00000629912 HTN3P15516 51 aa3.81□□□□□ -1.8
NEK3-211ENST00000629912 C5orf38Q86SI9 138 aa3.81□□□□□ -1.8
NEK3-211ENST00000629912 Q8IZM0 81 aa3.81□□□□□ -1.8
NEK3-211ENST00000629912 PKD1L1Q8TDX9 2849 aa3.8□□□□□ -1.8
NEK3-211ENST00000629912 LOC107984156A0A0G2JMH3 177 aa3.8□□□□□ -1.8
NEK3-211ENST00000629912 H3BMG7 143 aa3.8□□□□□ -1.8
NEK3-211ENST00000629912 SCGB1C2P0DMR2 95 aa3.8□□□□□ -1.8
NEK3-211ENST00000629912 REG3AQ06141 175 aa3.8□□□□□ -1.8
NEK3-211ENST00000629912 OCIAD2Q56VL3 154 aa3.8□□□□□ -1.8
NEK3-211ENST00000629912 C6orf226Q5I0X4 101 aa3.8□□□□□ -1.8
NEK3-211ENST00000629912 MEIG1Q5JSS6 88 aa3.8□□□□□ -1.8
NEK3-211ENST00000629912 KPRPQ5T749 579 aaPredicted RBP3.8□□□□□ -1.8
NEK3-211ENST00000629912 ARL17AQ8IVW1 177 aa3.8□□□□□ -1.8
NEK3-211ENST00000629912 LINC00269Q8N2A0 174 aa3.8□□□□□ -1.8
NEK3-211ENST00000629912 CHCHD10Q8WYQ3 142 aaPredicted RBP3.8□□□□□ -1.8
NEK3-211ENST00000629912 LINC01600Q96MT4 127 aa3.8□□□□□ -1.8
NEK3-211ENST00000629912 RETNQ9HD89 108 aa3.8□□□□□ -1.8
NEK3-211ENST00000629912 PRR34Q9NV39 138 aa3.8□□□□□ -1.8
NEK3-211ENST00000629912 PRO0461Q9UI25 63 aa3.8□□□□□ -1.8
NEK3-211ENST00000629912 TRAV8-4A0A0B4J246 113 aa3.79□□□□□ -1.8
NEK3-211ENST00000629912 K7ERU9 68 aa3.79□□□□□ -1.8
NEK3-211ENST00000629912 M0QXV9 152 aa3.79□□□□□ -1.8
NEK3-211ENST00000629912 COX7A2LO14548 114 aa3.79□□□□□ -1.8
NEK3-211ENST00000629912 TCL1BO95988 128 aa3.79□□□□□ -1.8
NEK3-211ENST00000629912 ANGP03950 147 aaKnown RBP3.79□□□□□ -1.8
NEK3-211ENST00000629912 XCL1P47992 114 aa3.79□□□□□ -1.8
NEK3-211ENST00000629912 PSMB2P49721 201 aa3.79□□□□□ -1.8
NEK3-211ENST00000629912 FOXI1Q12951 378 aa3.79□□□□□ -1.8
NEK3-211ENST00000629912 WFDC2Q14508 124 aa3.79□□□□□ -1.8
NEK3-211ENST00000629912 KIAA0087Q14695 138 aa3.79□□□□□ -1.8
NEK3-211ENST00000629912 SOSTDC1Q6X4U4 206 aa3.79□□□□□ -1.8
NEK3-211ENST00000629912 C11orf45Q8TAV5 145 aa3.79□□□□□ -1.8
NEK3-211ENST00000629912 SPATA25Q9BR10 227 aa3.79□□□□□ -1.8
NEK3-211ENST00000629912 TM2D3Q9BRN9 247 aa3.79□□□□□ -1.8
NEK3-211ENST00000629912 TOMM7Q9P0U1 55 aa3.79□□□□□ -1.8
NEK3-211ENST00000629912 KLK5Q9Y337 293 aaPredicted RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms