RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 ORAOV1Q8WV07 137 aa11.99□□□□□ -0.49
TARDBP-228ENST00000629725 V9GYV3 84 aa11.99□□□□□ -0.49
TARDBP-228ENST00000629725 VCYO14598 125 aa11.98□□□□□ -0.49
TARDBP-228ENST00000629725 TSPAN13O95857 204 aa11.98□□□□□ -0.49
TARDBP-228ENST00000629725 TMEM241Q24JQ0 296 aa11.98□□□□□ -0.49
TARDBP-228ENST00000629725 GAGE2EQ4V326 116 aa11.98□□□□□ -0.49
TARDBP-228ENST00000629725 GAGE2DQ9UEU5 116 aa11.98□□□□□ -0.49
TARDBP-228ENST00000629725 M0QXV9 152 aa11.97□□□□□ -0.49
TARDBP-228ENST00000629725 C10orf25Q5T742 122 aa11.97□□□□□ -0.49
TARDBP-228ENST00000629725 Q6ZUT4 128 aa11.97□□□□□ -0.49
TARDBP-228ENST00000629725 SUMO2P61956 95 aaKnown RBP11.96□□□□□ -0.49
TARDBP-228ENST00000629725 KRTAP7-1Q8IUC3 87 aa11.96□□□□□ -0.49
TARDBP-228ENST00000629725 NRACQ8N912 160 aa11.96□□□□□ -0.49
TARDBP-228ENST00000629725 PPP1R17O96001 155 aa11.95□□□□□ -0.5
TARDBP-228ENST00000629725 UNQ6190/PRO20217Q6UXQ8 127 aa11.95□□□□□ -0.5
TARDBP-228ENST00000629725 KIR2DL4Q99706 377 aa11.95□□□□□ -0.5
TARDBP-228ENST00000629725 NAT8BQ9UHF3 227 aa11.95□□□□□ -0.5
TARDBP-228ENST00000629725 SMDT1Q9H4I9 107 aa11.94□□□□□ -0.5
TARDBP-228ENST00000629725 C6orf48Q9UBA6 75 aa11.94□□□□□ -0.5
TARDBP-228ENST00000629725 RPL23P62829 140 aaKnown RBP11.93□□□□□ -0.5
TARDBP-228ENST00000629725 TMEM18Q96B42 140 aa11.93□□□□□ -0.5
TARDBP-228ENST00000629725 TIMM21Q9BVV7 248 aa11.93□□□□□ -0.5
TARDBP-228ENST00000629725 IGHV3OR16-9A0A0B4J2B5 98 aa11.92□□□□□ -0.5
TARDBP-228ENST00000629725 ADIRFQ15847 76 aa11.92□□□□□ -0.5
TARDBP-228ENST00000629725 MRPL51Q4U2R6 128 aaKnown RBP11.92□□□□□ -0.5
TARDBP-228ENST00000629725 FAM74A3Q4VXF1 159 aa11.92□□□□□ -0.5
TARDBP-228ENST00000629725 FAM104BQ5XKR9 115 aa11.92□□□□□ -0.5
TARDBP-228ENST00000629725 PPP1R2P9O14990 202 aa11.91□□□□□ -0.5
TARDBP-228ENST00000629725 ZNF861PO60384 105 aa11.91□□□□□ -0.5
TARDBP-228ENST00000629725 SMIM27A0A1W2PRY6 76 aa11.89□□□□□ -0.51
TARDBP-228ENST00000629725 C9JQL5 133 aa11.89□□□□□ -0.51
TARDBP-228ENST00000629725 NAT8Q9UHE5 227 aa11.89□□□□□ -0.51
TARDBP-228ENST00000629725 C20orf78Q9BR46 151 aa11.88□□□□□ -0.51
TARDBP-228ENST00000629725 LINC00862A6NCI5 91 aa11.87□□□□□ -0.51
TARDBP-228ENST00000629725 CKS2P33552 79 aa11.87□□□□□ -0.51
TARDBP-228ENST00000629725 TRBV24-1A0A075B6N3 115 aa11.86□□□□□ -0.51
TARDBP-228ENST00000629725 A0A1B0GW15 77 aa11.86□□□□□ -0.51
TARDBP-228ENST00000629725 RPL39P62891 51 aaKnown RBP11.86□□□□□ -0.51
TARDBP-228ENST00000629725 SRSF3P84103 164 aaKnown RBP11.86□□□□□ -0.51
TARDBP-228ENST00000629725 C9orf129Q5T035 196 aaKnown RBP11.86□□□□□ -0.51
TARDBP-228ENST00000629725 A0A087X002 238 aa11.85□□□□□ -0.51
TARDBP-228ENST00000629725 NDUFC2-KCTD14E9PQ53 114 aa11.85□□□□□ -0.51
TARDBP-228ENST00000629725 TNFRSF6BO95407 300 aa11.85□□□□□ -0.51
TARDBP-228ENST00000629725 RPL32P62910 135 aaKnown RBP11.85□□□□□ -0.51
TARDBP-228ENST00000629725 FAM104AQ969W3 186 aa11.85□□□□□ -0.51
TARDBP-228ENST00000629725 MUC17Q685J3 4493 aa11.85□□□□□ -0.51
TARDBP-228ENST00000629725 TRBV30A0A0K0K1B3 111 aa11.84□□□□□ -0.51
TARDBP-228ENST00000629725 TCAPO15273 167 aa11.84□□□□□ -0.51
TARDBP-228ENST00000629725 KIAA0087Q14695 138 aa11.84□□□□□ -0.51
TARDBP-228ENST00000629725 PEA15Q15121 130 aa11.84□□□□□ -0.51
TARDBP-228ENST00000629725 SMIM2Q9BVW6 85 aa11.84□□□□□ -0.51
TARDBP-228ENST00000629725 A0A1B0GVG6 124 aa11.83□□□□□ -0.52
TARDBP-228ENST00000629725 IFITM10A6NMD0 228 aa11.83□□□□□ -0.52
TARDBP-228ENST00000629725 D6R8Y8 96 aa11.83□□□□□ -0.52
TARDBP-228ENST00000629725 NUPR1O60356 82 aa11.83□□□□□ -0.52
TARDBP-228ENST00000629725 HBBP68871 147 aa11.83□□□□□ -0.52
TARDBP-228ENST00000629725 MRPL54Q6P161 138 aaKnown RBP11.83□□□□□ -0.52
TARDBP-228ENST00000629725 TYMSOSQ8TAI1 123 aa11.83□□□□□ -0.52
TARDBP-228ENST00000629725 SPANXA1Q9NS26 97 aa11.83□□□□□ -0.52
TARDBP-228ENST00000629725 TGIF2-C20orf24A0A0A6YYL0 155 aa11.82□□□□□ -0.52
TARDBP-228ENST00000629725 F8W036 122 aa11.81□□□□□ -0.52
TARDBP-228ENST00000629725 NPYP01303 97 aa11.81□□□□□ -0.52
TARDBP-228ENST00000629725 S100A8P05109 93 aa11.81□□□□□ -0.52
TARDBP-228ENST00000629725 CRYGAP11844 174 aa11.81□□□□□ -0.52
TARDBP-228ENST00000629725 MRPS36P82909 103 aaKnown RBP11.81□□□□□ -0.52
TARDBP-228ENST00000629725 C2orf82Q6UX34 121 aa11.81□□□□□ -0.52
TARDBP-228ENST00000629725 PACRGQ96M98 296 aaPredicted RBP11.81□□□□□ -0.52
TARDBP-228ENST00000629725 A0A1B0GXF2 115 aa11.8□□□□□ -0.52
TARDBP-228ENST00000629725 CTDSP1Q9GZU7 261 aa11.8□□□□□ -0.52
TARDBP-228ENST00000629725 CDIP1Q9H305 208 aa11.79□□□□□ -0.52
TARDBP-228ENST00000629725 RETNLBQ9BQ08 111 aa11.78□□□□□ -0.52
TARDBP-228ENST00000629725 C22orf24Q9Y442 160 aa11.78□□□□□ -0.52
TARDBP-228ENST00000629725 PPBPP02775 128 aa11.77□□□□□ -0.53
TARDBP-228ENST00000629725 RPL28P46779 137 aaKnown RBP11.76□□□□□ -0.53
TARDBP-228ENST00000629725 LBHQ53QV2 105 aaPredicted RBP11.76□□□□□ -0.53
TARDBP-228ENST00000629725 LINC00242Q5T6M2 205 aa11.75□□□□□ -0.53
TARDBP-228ENST00000629725 RAB5AP20339 215 aa11.74□□□□□ -0.53
TARDBP-228ENST00000629725 TPRXLQ17RH7 258 aa11.74□□□□□ -0.53
TARDBP-228ENST00000629725 ORMDL3Q8N138 153 aa11.74□□□□□ -0.53
TARDBP-228ENST00000629725 LINC00469Q8N7U9 141 aa11.74□□□□□ -0.53
TARDBP-228ENST00000629725 TMEM136Q6ZRR5 245 aa11.73□□□□□ -0.53
TARDBP-228ENST00000629725 PRELID3AQ96N28 172 aa11.73□□□□□ -0.53
TARDBP-228ENST00000629725 BCE1O60756 84 aa11.72□□□□□ -0.53
TARDBP-228ENST00000629725 IFI27P40305 119 aaPredicted RBP11.72□□□□□ -0.53
TARDBP-228ENST00000629725 ATP5L2Q7Z4Y8 100 aa11.72□□□□□ -0.53
TARDBP-228ENST00000629725 XAGE1AQ9HD64 81 aa11.71□□□□□ -0.53
TARDBP-228ENST00000629725 ANAPC11Q9NYG5 84 aa11.71□□□□□ -0.53
TARDBP-228ENST00000629725 IGLV4-3A0A075B6K6 122 aa11.7□□□□□ -0.54
TARDBP-228ENST00000629725 PRSS2P07478 247 aa11.7□□□□□ -0.54
TARDBP-228ENST00000629725 MRPL55Q7Z7F7 128 aaKnown RBP11.7□□□□□ -0.54
TARDBP-228ENST00000629725 LINC01561Q8N1V8 128 aa11.7□□□□□ -0.54
TARDBP-228ENST00000629725 PYGO1Q9Y3Y4 419 aa11.7□□□□□ -0.54
TARDBP-228ENST00000629725 CKS1BP61024 79 aa11.69□□□□□ -0.54
TARDBP-228ENST00000629725 KRTAP13-2Q52LG2 175 aa11.69□□□□□ -0.54
TARDBP-228ENST00000629725 TP73-AS1Q9UF72 201 aa11.69□□□□□ -0.54
TARDBP-228ENST00000629725 FSIP2Q5CZC0 6907 aa11.68□□□□□ -0.54
TARDBP-228ENST00000629725 IGLV7-46A0A075B6I9 117 aa11.68□□□□□ -0.54
TARDBP-228ENST00000629725 LOC389332A0A1B0GUA5 103 aa11.68□□□□□ -0.54
TARDBP-228ENST00000629725 LINC00173Q6ZV60 143 aa11.68□□□□□ -0.54
TARDBP-228ENST00000629725 LINC00304Q8N9R0 145 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms