RNA–Protein interactions for RNA: ENST00000629669.2

MCCC1-215, Transcript of methylcrotonoyl-CoA carboxylase 1, human

TSL 5 BASIC

Gene MCCC1, Length 2,316 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MCCC1-215	ENST00000629669	RS1	O15537	224 aa		13.12	□□□□□ -0.31
MCCC1-215	ENST00000629669	HERVK_113	P63121	156 aa		13.12	□□□□□ -0.31
MCCC1-215	ENST00000629669	DEFB136	Q30KP8	78 aa		13.12	□□□□□ -0.31
MCCC1-215	ENST00000629669	UBE2E2	Q96LR5	201 aa		13.12	□□□□□ -0.31
MCCC1-215	ENST00000629669	LINC01587	Q99440	93 aa		13.12	□□□□□ -0.31
MCCC1-215	ENST00000629669	C22orf24	Q9Y442	160 aa		13.12	□□□□□ -0.31
MCCC1-215	ENST00000629669	ACYP1	P07311	99 aa		13.12	□□□□□ -0.31
MCCC1-215	ENST00000629669	C3orf56	Q8N813	242 aa		13.11	□□□□□ -0.31
MCCC1-215	ENST00000629669	FAM236A	A0A1B0GUQ0	79 aa		13.11	□□□□□ -0.31
MCCC1-215	ENST00000629669	FAM236B	A0A1B0GV22	79 aa		13.11	□□□□□ -0.31
MCCC1-215	ENST00000629669	INAFM1	C9JVW0	142 aa		13.11	□□□□□ -0.31
MCCC1-215	ENST00000629669	DAZ2	Q13117	558 aa	Known RBP	13.11	□□□□□ -0.31
MCCC1-215	ENST00000629669	DAZ4	Q86SG3	579 aa	Known RBP	13.11	□□□□□ -0.31
MCCC1-215	ENST00000629669	DAZ3	Q9NR90	486 aa	Known RBP	13.11	□□□□□ -0.31
MCCC1-215	ENST00000629669	F8	P00451	2351 aa		13.1	□□□□□ -0.31
MCCC1-215	ENST00000629669	FAM19A3	Q7Z5A8	133 aa		13.1	□□□□□ -0.31
MCCC1-215	ENST00000629669	FAM218A	Q96MZ4	157 aa		13.1	□□□□□ -0.31
MCCC1-215	ENST00000629669	IMUP	Q9GZP8	106 aa		13.1	□□□□□ -0.31
MCCC1-215	ENST00000629669	HERV-K104	P63124	156 aa		13.09	□□□□□ -0.31
MCCC1-215	ENST00000629669	ZNF702P	Q9H963	129 aa		13.09	□□□□□ -0.31
MCCC1-215	ENST00000629669	DNAJC9-AS1	A6NH13	148 aa		13.08	□□□□□ -0.31
MCCC1-215	ENST00000629669	NF1	P21359	2839 aa		13.08	□□□□□ -0.32
MCCC1-215	ENST00000629669	TRAC	P01848	142 aa		13.08	□□□□□ -0.32
MCCC1-215	ENST00000629669	MAP6D1	Q9H9H5	199 aa		13.08	□□□□□ -0.32
MCCC1-215	ENST00000629669	ESM1	Q9NQ30	184 aa		13.08	□□□□□ -0.32
MCCC1-215	ENST00000629669	TRAV13-1	A0A0B4J241	112 aa		13.07	□□□□□ -0.32
MCCC1-215	ENST00000629669	BAALC-AS2	P0C853	105 aa		13.07	□□□□□ -0.32
MCCC1-215	ENST00000629669	SDIM1	Q6ZPB5	146 aa		13.07	□□□□□ -0.32
MCCC1-215	ENST00000629669	PRIMA1	Q86XR5	153 aa		13.07	□□□□□ -0.32
MCCC1-215	ENST00000629669	NSD1	Q96L73	2696 aa	Predicted RBP	13.07	□□□□□ -0.32
MCCC1-215	ENST00000629669		F5H768	121 aa		13.07	□□□□□ -0.32
MCCC1-215	ENST00000629669	LINC00643	Q86TS7	51 aa		13.06	□□□□□ -0.32
MCCC1-215	ENST00000629669	NTM-AS1	Q6ZSK4	140 aa		13.06	□□□□□ -0.32
MCCC1-215	ENST00000629669	COPS9	Q8WXC6	57 aa		13.05	□□□□□ -0.32
MCCC1-215	ENST00000629669	FN1	P02751	2386 aa	Known RBP	13.05	□□□□□ -0.32
MCCC1-215	ENST00000629669	INS	P01308	110 aa		13.04	□□□□□ -0.32
MCCC1-215	ENST00000629669	TMEM86B	Q8N661	226 aa		13.04	□□□□□ -0.32
MCCC1-215	ENST00000629669	CSDC2	Q9Y534	153 aa	Known RBP	13.03	□□□□□ -0.32
MCCC1-215	ENST00000629669	CDC42SE2	Q9NRR3	84 aa		13.02	□□□□□ -0.32
MCCC1-215	ENST00000629669	TMEM126A	Q9H061	195 aa		13.02	□□□□□ -0.33
MCCC1-215	ENST00000629669	XCL2	Q9UBD3	114 aa		13.01	□□□□□ -0.33
MCCC1-215	ENST00000629669	PEMT	Q9UBM1	199 aa		13.01	□□□□□ -0.33
MCCC1-215	ENST00000629669	FAM222A	Q5U5X8	452 aa		13.01	□□□□□ -0.33
MCCC1-215	ENST00000629669		Q9HAA7	133 aa		13.01	□□□□□ -0.33
MCCC1-215	ENST00000629669	IL17D	Q8TAD2	202 aa		13	□□□□□ -0.33
MCCC1-215	ENST00000629669	TRGV1	A0A0A0MS02	117 aa		13	□□□□□ -0.33
MCCC1-215	ENST00000629669	HILS1	P60008	231 aa		13	□□□□□ -0.33
MCCC1-215	ENST00000629669	HIST2H2BD	Q6DRA6	164 aa		12.99	□□□□□ -0.33
MCCC1-215	ENST00000629669	C5orf38	Q86SI9	138 aa		12.99	□□□□□ -0.33
MCCC1-215	ENST00000629669	C1orf158	Q8N1D5	194 aa		12.99	□□□□□ -0.33
MCCC1-215	ENST00000629669	PPDPF	Q9H3Y8	114 aa		12.99	□□□□□ -0.33
MCCC1-215	ENST00000629669		K7EQD1	137 aa		12.98	□□□□□ -0.33
MCCC1-215	ENST00000629669	RPL28	P46779	137 aa	Known RBP	12.98	□□□□□ -0.33
MCCC1-215	ENST00000629669	RPL36A	P83881	106 aa	Known RBP	12.98	□□□□□ -0.33
MCCC1-215	ENST00000629669	C3orf22	Q8N5N4	141 aa		12.98	□□□□□ -0.33
MCCC1-215	ENST00000629669	LINC00337	Q8N6G1	96 aa		12.98	□□□□□ -0.33
MCCC1-215	ENST00000629669	RPL36AL	Q969Q0	106 aa	Known RBP	12.98	□□□□□ -0.33
MCCC1-215	ENST00000629669	DEFB114	Q30KQ6	69 aa		12.97	□□□□□ -0.33
MCCC1-215	ENST00000629669	IGKV2-28	A0A075B6P5	120 aa		12.97	□□□□□ -0.33
MCCC1-215	ENST00000629669	IGKV2D-28	P01615	120 aa		12.97	□□□□□ -0.33
MCCC1-215	ENST00000629669	RNASE1	P07998	156 aa	Known RBP	12.97	□□□□□ -0.33
MCCC1-215	ENST00000629669	MAL	P21145	153 aa		12.97	□□□□□ -0.33
MCCC1-215	ENST00000629669	GAGE2A	Q6NT46	116 aa		12.97	□□□□□ -0.33
MCCC1-215	ENST00000629669	TEP1	Q99973	2627 aa	Known RBP	12.97	□□□□□ -0.33
MCCC1-215	ENST00000629669	DYNLRB2	Q8TF09	96 aa		12.96	□□□□□ -0.33
MCCC1-215	ENST00000629669		Q6ZTI0	123 aa		12.96	□□□□□ -0.34
MCCC1-215	ENST00000629669	SETD2	Q9BYW2	2564 aa	Predicted RBP	12.96	□□□□□ -0.34
MCCC1-215	ENST00000629669	NIPBL	Q6KC79	2804 aa	eCLIP	12.96	□□□□□ -0.34
MCCC1-215	ENST00000629669	TRAV13-2	A0A0B4J235	113 aa		12.95	□□□□□ -0.34
MCCC1-215	ENST00000629669	TRBV10-1	A0A0K0K1A3	114 aa		12.95	□□□□□ -0.34
MCCC1-215	ENST00000629669	INAFM2	P0DMQ5	153 aa		12.95	□□□□□ -0.34
MCCC1-215	ENST00000629669	CXCL5	P42830	114 aa		12.95	□□□□□ -0.34
MCCC1-215	ENST00000629669	C9orf153	Q5TBE3	101 aa		12.95	□□□□□ -0.34
MCCC1-215	ENST00000629669	ODF3L2	Q3SX64	289 aa		12.95	□□□□□ -0.34
MCCC1-215	ENST00000629669	C9orf129	Q5T035	196 aa	Known RBP	12.95	□□□□□ -0.34
MCCC1-215	ENST00000629669	MIR7-3HG	Q8N6C7	128 aa		12.95	□□□□□ -0.34
MCCC1-215	ENST00000629669	PF4	P02776	101 aa		12.94	□□□□□ -0.34
MCCC1-215	ENST00000629669	C2CD3	Q4AC94	2353 aa		12.94	□□□□□ -0.34
MCCC1-215	ENST00000629669	UQCRQ	O14949	82 aa		12.94	□□□□□ -0.34
MCCC1-215	ENST00000629669	CRP	P02741	224 aa		12.94	□□□□□ -0.34
MCCC1-215	ENST00000629669	MAST4	O15021	2626 aa		12.93	□□□□□ -0.34
MCCC1-215	ENST00000629669		A0A087WYN8	130 aa		12.93	□□□□□ -0.34
MCCC1-215	ENST00000629669	C4orf3	Q8WVX3	66 aa		12.93	□□□□□ -0.34
MCCC1-215	ENST00000629669	LINC00526	Q96FQ7	95 aa		12.93	□□□□□ -0.34
MCCC1-215	ENST00000629669	ATP5G1	P05496	136 aa		12.92	□□□□□ -0.34
MCCC1-215	ENST00000629669	SND1-IT1	Q9HBX3	110 aa		12.92	□□□□□ -0.34
MCCC1-215	ENST00000629669	SMIM11B	Q8TCY0	68 aa		12.91	□□□□□ -0.34
MCCC1-215	ENST00000629669	COX7B2	Q8TF08	81 aa		12.91	□□□□□ -0.34
MCCC1-215	ENST00000629669	KHDC1L	Q5JSQ8	128 aa		12.91	□□□□□ -0.34
MCCC1-215	ENST00000629669	HIST1H4A	P62805	103 aa	Known RBP	12.9	□□□□□ -0.34
MCCC1-215	ENST00000629669	C2orf48	Q96LS8	159 aa		12.9	□□□□□ -0.34
MCCC1-215	ENST00000629669	TMEM243	Q9BU79	118 aa		12.9	□□□□□ -0.34
MCCC1-215	ENST00000629669	JMJD1C	Q15652	2540 aa		12.89	□□□□□ -0.35
MCCC1-215	ENST00000629669	STH	Q8IWL8	128 aa		12.89	□□□□□ -0.35
MCCC1-215	ENST00000629669	UBE2L6	O14933	153 aa		12.89	□□□□□ -0.35
MCCC1-215	ENST00000629669	LINC01006	Q8NI28	216 aa		12.89	□□□□□ -0.35
MCCC1-215	ENST00000629669	TOMM7	Q9P0U1	55 aa		12.89	□□□□□ -0.35
MCCC1-215	ENST00000629669	KLK5	Q9Y337	293 aa	Predicted RBP	12.88	□□□□□ -0.35
MCCC1-215	ENST00000629669	LOC100131303	A0A0U1RQF7	123 aa		12.88	□□□□□ -0.35
MCCC1-215	ENST00000629669	COX7C	P15954	63 aa		12.88	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms