RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 IGF2P01344 180 aa1.51□□□□□ -2.17
VPS8-228ENST00000628962 TRACP01848 142 aa1.51□□□□□ -2.17
VPS8-228ENST00000628962 SLC25A4P12235 298 aa1.51□□□□□ -2.17
VPS8-228ENST00000628962 SNRPD3P62318 126 aaKnown RBP1.51□□□□□ -2.17
VPS8-228ENST00000628962 NDUFA11Q86Y39 141 aa1.51□□□□□ -2.17
VPS8-228ENST00000628962 LINC00311Q8N616 119 aa1.51□□□□□ -2.17
VPS8-228ENST00000628962 OR5AK2Q8NH90 309 aa1.51□□□□□ -2.17
VPS8-228ENST00000628962 RAB37Q96AX2 223 aa1.51□□□□□ -2.17
VPS8-228ENST00000628962 SNRNP25Q9BV90 132 aaKnown RBP1.51□□□□□ -2.17
VPS8-228ENST00000628962 COMMD3Q9UBI1 195 aa1.51□□□□□ -2.17
VPS8-228ENST00000628962 HMCN1Q96RW7 5635 aa1.51□□□□□ -2.17
VPS8-228ENST00000628962 SNRNP200O75643 2136 aaKnown RBP1.51□□□□□ -2.17
VPS8-228ENST00000628962 PNMA8CA0A1B0GUJ8 204 aa1.5□□□□□ -2.17
VPS8-228ENST00000628962 IFNGP01579 166 aa1.5□□□□□ -2.17
VPS8-228ENST00000628962 S100PP25815 95 aa1.5□□□□□ -2.17
VPS8-228ENST00000628962 ETV6P41212 452 aa1.5□□□□□ -2.17
VPS8-228ENST00000628962 CIRBPQ14011 172 aaKnown RBP1.5□□□□□ -2.17
VPS8-228ENST00000628962 ASB16-AS1Q495Z4 193 aa1.5□□□□□ -2.17
VPS8-228ENST00000628962 GLIPR1L1Q6UWM5 242 aa1.5□□□□□ -2.17
VPS8-228ENST00000628962 ARPINQ7Z6K5 226 aa1.5□□□□□ -2.17
VPS8-228ENST00000628962 SPACA4Q8TDM5 124 aa1.5□□□□□ -2.17
VPS8-228ENST00000628962 SFT2D1Q8WV19 159 aa1.5□□□□□ -2.17
VPS8-228ENST00000628962 TMEM191AQ9H0A3 160 aa1.5□□□□□ -2.17
VPS8-228ENST00000628962 FKBP11Q9NYL4 201 aa1.5□□□□□ -2.17
VPS8-228ENST00000628962 METTL1Q9UBP6 276 aaKnown RBP1.5□□□□□ -2.17
VPS8-228ENST00000628962 DNAJC15Q9Y5T4 150 aa1.5□□□□□ -2.17
VPS8-228ENST00000628962 SCN3AQ9NY46 2000 aa1.5□□□□□ -2.17
VPS8-228ENST00000628962 ARFGEF3Q5TH69 2177 aa1.49□□□□□ -2.17
VPS8-228ENST00000628962 DNAH6Q9C0G6 4158 aa1.49□□□□□ -2.17
VPS8-228ENST00000628962 LRP1BQ9NZR2 4599 aa1.49□□□□□ -2.17
VPS8-228ENST00000628962 TRAV10A0A0B4J240 114 aa1.49□□□□□ -2.17
VPS8-228ENST00000628962 TCRBV4S1A1TA0A5B7 111 aa1.49□□□□□ -2.17
VPS8-228ENST00000628962 C2orf70A6NJV1 201 aa1.49□□□□□ -2.17
VPS8-228ENST00000628962 YPEL1O60688 119 aa1.49□□□□□ -2.17
VPS8-228ENST00000628962 ERC2-IT1O76042 136 aa1.49□□□□□ -2.17
VPS8-228ENST00000628962 CD3DP04234 171 aa1.49□□□□□ -2.17
VPS8-228ENST00000628962 GUCA1AP43080 201 aaPredicted RBP1.49□□□□□ -2.17
VPS8-228ENST00000628962 PCBD1P61457 104 aa1.49□□□□□ -2.17
VPS8-228ENST00000628962 PDE6HQ13956 83 aa1.49□□□□□ -2.17
VPS8-228ENST00000628962 Q1T7F1 81 aa1.49□□□□□ -2.17
VPS8-228ENST00000628962 C2orf82Q6UX34 121 aa1.49□□□□□ -2.17
VPS8-228ENST00000628962 IZUMO2Q6UXV1 221 aa1.49□□□□□ -2.17
VPS8-228ENST00000628962 ATOH7Q8N100 152 aa1.49□□□□□ -2.17
VPS8-228ENST00000628962 SLC35B3Q9H1N7 401 aa1.49□□□□□ -2.17
VPS8-228ENST00000628962 CCDC167Q9P0B6 97 aa1.49□□□□□ -2.17
VPS8-228ENST00000628962 VPS13BQ7Z7G8 4022 aa1.49□□□□□ -2.17
VPS8-228ENST00000628962 FAT1Q14517 4588 aa1.49□□□□□ -2.17
VPS8-228ENST00000628962 NINQ8N4C6 2090 aa1.49□□□□□ -2.17
VPS8-228ENST00000628962 TRBV20-1A0A075B6N2 111 aa1.48□□□□□ -2.17
VPS8-228ENST00000628962 RBP4P02753 201 aa1.48□□□□□ -2.17
VPS8-228ENST00000628962 CD14P08571 375 aa1.48□□□□□ -2.17
VPS8-228ENST00000628962 BRS3P32247 399 aa1.48□□□□□ -2.17
VPS8-228ENST00000628962 CKS2P33552 79 aa1.48□□□□□ -2.17
VPS8-228ENST00000628962 ASIPP42127 132 aa1.48□□□□□ -2.17
VPS8-228ENST00000628962 CLLU1Q5K131 121 aa1.48□□□□□ -2.17
VPS8-228ENST00000628962 LELP1Q5T871 98 aa1.48□□□□□ -2.17
VPS8-228ENST00000628962 NCBP2-AS2Q69YL0 99 aa1.48□□□□□ -2.17
VPS8-228ENST00000628962 OR5AS1Q8N127 324 aa1.48□□□□□ -2.17
VPS8-228ENST00000628962 C10orf111Q8N326 155 aa1.48□□□□□ -2.17
VPS8-228ENST00000628962 OTOSQ8NHW6 89 aa1.48□□□□□ -2.17
VPS8-228ENST00000628962 Q96M85 177 aa1.48□□□□□ -2.17
VPS8-228ENST00000628962 SDF2Q99470 211 aa1.48□□□□□ -2.17
VPS8-228ENST00000628962 CST11Q9H112 138 aa1.48□□□□□ -2.17
VPS8-228ENST00000628962 SAR1AQ9NR31 198 aa1.48□□□□□ -2.17
VPS8-228ENST00000628962 TRAV14DV4A0A0A6YYC5 116 aa1.47□□□□□ -2.17
VPS8-228ENST00000628962 CDC42EP2O14613 210 aa1.47□□□□□ -2.17
VPS8-228ENST00000628962 ZNF25P17030 456 aaPredicted RBP1.47□□□□□ -2.17
VPS8-228ENST00000628962 ZNF833PQ6ZTB9 187 aa1.47□□□□□ -2.17
VPS8-228ENST00000628962 CLECL1Q8IZS7 167 aa1.47□□□□□ -2.17
VPS8-228ENST00000628962 LINC00269Q8N2A0 174 aa1.47□□□□□ -2.17
VPS8-228ENST00000628962 ZNF431Q8TF32 576 aaPredicted RBP1.47□□□□□ -2.17
VPS8-228ENST00000628962 TMEM106BQ9NUM4 274 aa1.47□□□□□ -2.17
VPS8-228ENST00000628962 GNG8Q9UK08 70 aa1.47□□□□□ -2.17
VPS8-228ENST00000628962 LSM2Q9Y333 95 aaKnown RBP1.47□□□□□ -2.17
VPS8-228ENST00000628962 MPC1Q9Y5U8 109 aa1.47□□□□□ -2.17
VPS8-228ENST00000628962 DNAH5Q8TE73 4624 aa1.47□□□□□ -2.17
VPS8-228ENST00000628962 DOCK11Q5JSL3 2073 aa1.47□□□□□ -2.17
VPS8-228ENST00000628962 FLG2Q5D862 2391 aaPredicted RBP1.47□□□□□ -2.17
VPS8-228ENST00000628962 UQCRHLA0A096LP55 91 aa1.46□□□□□ -2.18
VPS8-228ENST00000628962 C3orf85A0A1B0GTC6 90 aa1.46□□□□□ -2.18
VPS8-228ENST00000628962 C9orf170A2RU37 121 aa1.46□□□□□ -2.18
VPS8-228ENST00000628962 A6NN06 94 aa1.46□□□□□ -2.18
VPS8-228ENST00000628962 BBIP1A8MTZ0 92 aa1.46□□□□□ -2.18
VPS8-228ENST00000628962 PYYP10082 97 aa1.46□□□□□ -2.18
VPS8-228ENST00000628962 FGF7P21781 194 aa1.46□□□□□ -2.18
VPS8-228ENST00000628962 CCL8P80075 99 aa1.46□□□□□ -2.18
VPS8-228ENST00000628962 MRPS10P82664 201 aaKnown RBP1.46□□□□□ -2.18
VPS8-228ENST00000628962 OCIAD2Q56VL3 154 aa1.46□□□□□ -2.18
VPS8-228ENST00000628962 SPRNQ5BIV9 151 aa1.46□□□□□ -2.18
VPS8-228ENST00000628962 C1orf137Q5JT78 98 aa1.46□□□□□ -2.18
VPS8-228ENST00000628962 CASC2Q6XLA1 102 aa1.46□□□□□ -2.18
VPS8-228ENST00000628962 FP248Q71RG6 208 aaPredicted RBP1.46□□□□□ -2.18
VPS8-228ENST00000628962 COA5Q86WW8 74 aa1.46□□□□□ -2.18
VPS8-228ENST00000628962 Q8N2B8 174 aa1.46□□□□□ -2.18
VPS8-228ENST00000628962 FAM19A2Q8N3H0 131 aa1.46□□□□□ -2.18
VPS8-228ENST00000628962 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.46□□□□□ -2.18
VPS8-228ENST00000628962 C4orf3Q8WVX3 66 aa1.46□□□□□ -2.18
VPS8-228ENST00000628962 NAA38Q9BRA0 125 aaKnown RBP1.46□□□□□ -2.18
VPS8-228ENST00000628962 TCEAL7Q9BRU2 100 aa1.46□□□□□ -2.18
VPS8-228ENST00000628962 DYNLRB1Q9NP97 96 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms