RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 FOXI1Q12951 378 aa9.7□□□□□ -0.86
PNKP-221ENST00000627317 C14orf177Q52M58 125 aa9.7□□□□□ -0.86
PNKP-221ENST00000627317 ZC2HC1BQ5TFG8 222 aa9.7□□□□□ -0.86
PNKP-221ENST00000627317 CD164L2Q6UWJ8 174 aa9.7□□□□□ -0.86
PNKP-221ENST00000627317 LINC00173Q6ZV60 143 aa9.7□□□□□ -0.86
PNKP-221ENST00000627317 AMELXQ99217 191 aa9.7□□□□□ -0.86
PNKP-221ENST00000627317 ATP5LO75964 103 aa9.69□□□□□ -0.86
PNKP-221ENST00000627317 LINC00310P59036 64 aa9.69□□□□□ -0.86
PNKP-221ENST00000627317 PDZD11Q5EBL8 140 aa9.69□□□□□ -0.86
PNKP-221ENST00000627317 Q8N814 137 aa9.69□□□□□ -0.86
PNKP-221ENST00000627317 UBE2D1P51668 147 aa9.68□□□□□ -0.86
PNKP-221ENST00000627317 FAM19A2Q8N3H0 131 aa9.68□□□□□ -0.86
PNKP-221ENST00000627317 COX7A2LO14548 114 aa9.67□□□□□ -0.86
PNKP-221ENST00000627317 CFAP161Q6P656 301 aa9.67□□□□□ -0.86
PNKP-221ENST00000627317 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.66□□□□□ -0.86
PNKP-221ENST00000627317 MALP21145 153 aa9.66□□□□□ -0.86
PNKP-221ENST00000627317 FUSP35637 526 aaKnown RBP eCLIP9.66□□□□□ -0.86
PNKP-221ENST00000627317 NDUFA6P56556 154 aa9.66□□□□□ -0.86
PNKP-221ENST00000627317 PMVKQ15126 192 aa9.66□□□□□ -0.86
PNKP-221ENST00000627317 CDPF1Q6NVV7 123 aa9.66□□□□□ -0.86
PNKP-221ENST00000627317 NTN5Q8WTR8 489 aaPredicted RBP9.66□□□□□ -0.86
PNKP-221ENST00000627317 KRTAP4-5Q9BYR2 181 aa9.66□□□□□ -0.86
PNKP-221ENST00000627317 SEC11AP67812 179 aa9.65□□□□□ -0.86
PNKP-221ENST00000627317 LINC00242Q5T6M2 205 aa9.65□□□□□ -0.86
PNKP-221ENST00000627317 C5orf38Q86SI9 138 aa9.65□□□□□ -0.86
PNKP-221ENST00000627317 CST9LQ9H4G1 147 aa9.65□□□□□ -0.86
PNKP-221ENST00000627317 PGPEP1Q9NXJ5 209 aa9.65□□□□□ -0.86
PNKP-221ENST00000627317 IGLV5-52A0A0A0MRZ9 124 aa9.64□□□□□ -0.87
PNKP-221ENST00000627317 IGHV1-58A0A0C4DH39 117 aa9.64□□□□□ -0.87
PNKP-221ENST00000627317 hDV102S1A0JD36 115 aa9.64□□□□□ -0.87
PNKP-221ENST00000627317 NUPR1O60356 82 aa9.64□□□□□ -0.87
PNKP-221ENST00000627317 C15orf56Q8N910 161 aa9.64□□□□□ -0.87
PNKP-221ENST00000627317 IFI27L1Q96BM0 104 aa9.64□□□□□ -0.87
PNKP-221ENST00000627317 GEMIN7Q9H840 131 aaKnown RBP9.64□□□□□ -0.87
PNKP-221ENST00000627317 IGHV3OR16-9A0A0B4J2B5 98 aa9.63□□□□□ -0.87
PNKP-221ENST00000627317 LEPROTL1O95214 131 aa9.63□□□□□ -0.87
PNKP-221ENST00000627317 APOMO95445 188 aa9.63□□□□□ -0.87
PNKP-221ENST00000627317 PRSS1P07477 247 aa9.63□□□□□ -0.87
PNKP-221ENST00000627317 HERVK_113P63121 156 aa9.63□□□□□ -0.87
PNKP-221ENST00000627317 HIGD2BQ4VC39 106 aa9.63□□□□□ -0.87
PNKP-221ENST00000627317 A0A0J9YXV3 536 aa9.62□□□□□ -0.87
PNKP-221ENST00000627317 COX6A2Q02221 97 aa9.62□□□□□ -0.87
PNKP-221ENST00000627317 FAM19A3Q7Z5A8 133 aa9.62□□□□□ -0.87
PNKP-221ENST00000627317 HSPB8Q9UJY1 196 aa9.62□□□□□ -0.87
PNKP-221ENST00000627317 GVQW2A0A096LPI5 108 aaPredicted RBP9.61□□□□□ -0.87
PNKP-221ENST00000627317 TINCRA0A1B0GVN0 87 aa9.61□□□□□ -0.87
PNKP-221ENST00000627317 FABP4P15090 132 aa9.61□□□□□ -0.87
PNKP-221ENST00000627317 COA6Q5JTJ3 125 aaKnown RBP9.61□□□□□ -0.87
PNKP-221ENST00000627317 A0A087WZ39 114 aa9.6□□□□□ -0.87
PNKP-221ENST00000627317 KRTAP10-1P60331 282 aa9.6□□□□□ -0.87
PNKP-221ENST00000627317 LINC00469Q8N7U9 141 aa9.6□□□□□ -0.87
PNKP-221ENST00000627317 ZNF561-AS1K7EIQ3 104 aa9.59□□□□□ -0.87
PNKP-221ENST00000627317 ORAOV1Q8WV07 137 aa9.59□□□□□ -0.87
PNKP-221ENST00000627317 CHAC1Q9BUX1 264 aa9.59□□□□□ -0.87
PNKP-221ENST00000627317 IGHV3-64A0A075B6Q5 118 aa9.58□□□□□ -0.88
PNKP-221ENST00000627317 TRAV12-1A0A0B4J245 112 aa9.58□□□□□ -0.88
PNKP-221ENST00000627317 H0Y8G0 127 aa9.58□□□□□ -0.88
PNKP-221ENST00000627317 IGLC3P0DOY3 106 aa9.58□□□□□ -0.88
PNKP-221ENST00000627317 SPAG11BQ08648 103 aa9.58□□□□□ -0.88
PNKP-221ENST00000627317 LINC01561Q8N1V8 128 aa9.58□□□□□ -0.88
PNKP-221ENST00000627317 OR10D4PQ8NGN7 298 aa9.58□□□□□ -0.88
PNKP-221ENST00000627317 PACRGQ96M98 296 aaPredicted RBP9.58□□□□□ -0.88
PNKP-221ENST00000627317 CDKN2A-AS1Q9UH64 79 aa9.58□□□□□ -0.88
PNKP-221ENST00000627317 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.57□□□□□ -0.88
PNKP-221ENST00000627317 GCSHP23434 173 aa9.57□□□□□ -0.88
PNKP-221ENST00000627317 CNBPP62633 177 aaKnown RBP9.57□□□□□ -0.88
PNKP-221ENST00000627317 Q8N1X5 172 aa9.57□□□□□ -0.88
PNKP-221ENST00000627317 LINC00526Q96FQ7 95 aa9.57□□□□□ -0.88
PNKP-221ENST00000627317 CHTOPQ9Y3Y2 248 aaKnown RBP9.57□□□□□ -0.88
PNKP-221ENST00000627317 IGLV4-69A0A075B6H9 119 aa9.56□□□□□ -0.88
PNKP-221ENST00000627317 IGLV5-45A0A087WSX0 123 aa9.56□□□□□ -0.88
PNKP-221ENST00000627317 H3BRM9 83 aa9.56□□□□□ -0.88
PNKP-221ENST00000627317 XGP55808 180 aa9.56□□□□□ -0.88
PNKP-221ENST00000627317 MAP1LC3CQ9BXW4 147 aa9.56□□□□□ -0.88
PNKP-221ENST00000627317 S100A6P06703 90 aa9.55□□□□□ -0.88
PNKP-221ENST00000627317 F8VRH5 84 aa9.54□□□□□ -0.88
PNKP-221ENST00000627317 LINC01620Q4KN68 170 aa9.54□□□□□ -0.88
PNKP-221ENST00000627317 CARD19Q96LW7 228 aa9.54□□□□□ -0.88
PNKP-221ENST00000627317 CAMK2N2Q96S95 79 aa9.54□□□□□ -0.88
PNKP-221ENST00000627317 MRPL35Q9NZE8 188 aaKnown RBP9.54□□□□□ -0.88
PNKP-221ENST00000627317 FAT1Q14517 4588 aa9.54□□□□□ -0.88
PNKP-221ENST00000627317 C11orf86A6NJI1 115 aa9.53□□□□□ -0.88
PNKP-221ENST00000627317 SLPIP03973 132 aa9.53□□□□□ -0.88
PNKP-221ENST00000627317 PRSS2P07478 247 aa9.53□□□□□ -0.88
PNKP-221ENST00000627317 ZNF22P17026 224 aaPredicted RBP9.53□□□□□ -0.88
PNKP-221ENST00000627317 SYCNQ0VAF6 134 aa9.53□□□□□ -0.88
PNKP-221ENST00000627317 ODF1Q14990 250 aa9.53□□□□□ -0.88
PNKP-221ENST00000627317 TMEM170BQ5T4T1 132 aa9.53□□□□□ -0.88
PNKP-221ENST00000627317 C2orf48Q96LS8 159 aa9.53□□□□□ -0.88
PNKP-221ENST00000627317 TOMM7Q9P0U1 55 aa9.53□□□□□ -0.88
PNKP-221ENST00000627317 SMIM1B2RUZ4 78 aa9.52□□□□□ -0.89
PNKP-221ENST00000627317 SPINK8P0C7L1 97 aa9.52□□□□□ -0.89
PNKP-221ENST00000627317 C9orf163Q8N9P6 203 aa9.52□□□□□ -0.89
PNKP-221ENST00000627317 DNAH8Q96JB1 4490 aa9.52□□□□□ -0.89
PNKP-221ENST00000627317 NDUFA1O15239 70 aa9.51□□□□□ -0.89
PNKP-221ENST00000627317 F8WDY8 70 aa9.5□□□□□ -0.89
PNKP-221ENST00000627317 PLNP26678 52 aa9.5□□□□□ -0.89
PNKP-221ENST00000627317 S100A2P29034 98 aa9.5□□□□□ -0.89
PNKP-221ENST00000627317 Q6ZRU5 148 aa9.5□□□□□ -0.89
PNKP-221ENST00000627317 Q8IZM0 81 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms