RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 RMI2Q96E14 147 aa13.16□□□□□ -0.3
R3HCC1-210ENST00000625275 AMELXQ99217 191 aa13.16□□□□□ -0.3
R3HCC1-210ENST00000625275 TM2D2Q9BX73 214 aa13.16□□□□□ -0.3
R3HCC1-210ENST00000625275 TRAV13-1A0A0B4J241 112 aa13.16□□□□□ -0.3
R3HCC1-210ENST00000625275 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.16□□□□□ -0.3
R3HCC1-210ENST00000625275 PAPPA-AS1Q5QFB9 102 aa13.16□□□□□ -0.3
R3HCC1-210ENST00000625275 Q5VSD8 79 aa13.16□□□□□ -0.3
R3HCC1-210ENST00000625275 VCX2Q9H322 139 aa13.16□□□□□ -0.3
R3HCC1-210ENST00000625275 IFITM10A6NMD0 228 aa13.15□□□□□ -0.3
R3HCC1-210ENST00000625275 KRTAP26-1Q6PEX3 210 aa13.15□□□□□ -0.3
R3HCC1-210ENST00000625275 DMBT1Q9UGM3 2413 aaPredicted RBP13.14□□□□□ -0.31
R3HCC1-210ENST00000625275 ATP5LO75964 103 aa13.14□□□□□ -0.31
R3HCC1-210ENST00000625275 BAALCQ8WXS3 180 aa13.14□□□□□ -0.31
R3HCC1-210ENST00000625275 CHCHD10Q8WYQ3 142 aaPredicted RBP13.14□□□□□ -0.31
R3HCC1-210ENST00000625275 COX11Q9Y6N1 276 aa13.14□□□□□ -0.31
R3HCC1-210ENST00000625275 SS18Q15532 418 aa13.13□□□□□ -0.31
R3HCC1-210ENST00000625275 C2orf88Q9BSF0 95 aa13.13□□□□□ -0.31
R3HCC1-210ENST00000625275 FLG2Q5D862 2391 aaPredicted RBP13.12□□□□□ -0.31
R3HCC1-210ENST00000625275 CCL25O15444 150 aa13.12□□□□□ -0.31
R3HCC1-210ENST00000625275 LEPROTL1O95214 131 aa13.11□□□□□ -0.31
R3HCC1-210ENST00000625275 XCL1P47992 114 aa13.11□□□□□ -0.31
R3HCC1-210ENST00000625275 INAFM2P0DMQ5 153 aa13.1□□□□□ -0.31
R3HCC1-210ENST00000625275 UBE2D1P51668 147 aa13.1□□□□□ -0.31
R3HCC1-210ENST00000625275 HAMPP81172 84 aa13.1□□□□□ -0.31
R3HCC1-210ENST00000625275 WFDC2Q14508 124 aa13.1□□□□□ -0.31
R3HCC1-210ENST00000625275 IFI27L1Q96BM0 104 aa13.1□□□□□ -0.31
R3HCC1-210ENST00000625275 CST9LQ9H4G1 147 aa13.1□□□□□ -0.31
R3HCC1-210ENST00000625275 FAT1Q14517 4588 aa13.1□□□□□ -0.31
R3HCC1-210ENST00000625275 GAGE12HA6NDE8 117 aa13.1□□□□□ -0.31
R3HCC1-210ENST00000625275 SMR3BP02814 79 aaPredicted RBP13.1□□□□□ -0.31
R3HCC1-210ENST00000625275 FABP4P15090 132 aa13.1□□□□□ -0.31
R3HCC1-210ENST00000625275 PMVKQ15126 192 aa13.1□□□□□ -0.31
R3HCC1-210ENST00000625275 FOXI1Q12951 378 aa13.08□□□□□ -0.32
R3HCC1-210ENST00000625275 LINC00242Q5T6M2 205 aa13.08□□□□□ -0.32
R3HCC1-210ENST00000625275 CD164L2Q6UWJ8 174 aa13.08□□□□□ -0.32
R3HCC1-210ENST00000625275 HSPB8Q9UJY1 196 aa13.08□□□□□ -0.32
R3HCC1-210ENST00000625275 S100A6P06703 90 aa13.07□□□□□ -0.32
R3HCC1-210ENST00000625275 SRRM2Q9UQ35 2752 aaKnown RBP13.07□□□□□ -0.32
R3HCC1-210ENST00000625275 LECT2O14960 151 aa13.06□□□□□ -0.32
R3HCC1-210ENST00000625275 PRSS1P07477 247 aa13.06□□□□□ -0.32
R3HCC1-210ENST00000625275 FAM19A3Q7Z5A8 133 aa13.05□□□□□ -0.32
R3HCC1-210ENST00000625275 IGHV3OR16-9A0A0B4J2B5 98 aa13.04□□□□□ -0.32
R3HCC1-210ENST00000625275 A0A0J9YXV3 536 aa13.04□□□□□ -0.32
R3HCC1-210ENST00000625275 FAM229AH3BQW9 127 aa13.04□□□□□ -0.32
R3HCC1-210ENST00000625275 COX6A2Q02221 97 aa13.04□□□□□ -0.32
R3HCC1-210ENST00000625275 FAM30AQ9NZY2 134 aa13.04□□□□□ -0.32
R3HCC1-210ENST00000625275 HIST3H2BBQ8N257 126 aa13.04□□□□□ -0.32
R3HCC1-210ENST00000625275 PACRGQ96M98 296 aaPredicted RBP13.04□□□□□ -0.32
R3HCC1-210ENST00000625275 VPS13BQ7Z7G8 4022 aa13.03□□□□□ -0.32
R3HCC1-210ENST00000625275 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.03□□□□□ -0.32
R3HCC1-210ENST00000625275 TRAV12-1A0A0B4J245 112 aa13.02□□□□□ -0.33
R3HCC1-210ENST00000625275 H0Y8G0 127 aa13.02□□□□□ -0.33
R3HCC1-210ENST00000625275 SNRPEP62304 92 aaKnown RBP13.02□□□□□ -0.33
R3HCC1-210ENST00000625275 SEC11AP67812 179 aa13.02□□□□□ -0.33
R3HCC1-210ENST00000625275 C5orf38Q86SI9 138 aa13.02□□□□□ -0.33
R3HCC1-210ENST00000625275 IGLV4-69A0A075B6H9 119 aa13.01□□□□□ -0.33
R3HCC1-210ENST00000625275 USP17L23D6RBM5 183 aa13.01□□□□□ -0.33
R3HCC1-210ENST00000625275 COX7A2LO14548 114 aa13.01□□□□□ -0.33
R3HCC1-210ENST00000625275 Q6ZSA8 131 aa13.01□□□□□ -0.33
R3HCC1-210ENST00000625275 TINCRA0A1B0GVN0 87 aa13□□□□□ -0.33
R3HCC1-210ENST00000625275 C5orf52A6NGY3 159 aa13□□□□□ -0.33
R3HCC1-210ENST00000625275 HERVK_113P63121 156 aa13□□□□□ -0.33
R3HCC1-210ENST00000625275 MAP1LC3CQ9BXW4 147 aa13□□□□□ -0.33
R3HCC1-210ENST00000625275 GEMIN7Q9H840 131 aaKnown RBP13□□□□□ -0.33
R3HCC1-210ENST00000625275 IGLC3P0DOY3 106 aa12.99□□□□□ -0.33
R3HCC1-210ENST00000625275 TMA7Q9Y2S6 64 aaKnown RBP12.99□□□□□ -0.33
R3HCC1-210ENST00000625275 CHTOPQ9Y3Y2 248 aaKnown RBP12.99□□□□□ -0.33
R3HCC1-210ENST00000625275 S100A2P29034 98 aa12.98□□□□□ -0.33
R3HCC1-210ENST00000625275 ODF1Q14990 250 aa12.98□□□□□ -0.33
R3HCC1-210ENST00000625275 C15orf56Q8N910 161 aa12.98□□□□□ -0.33
R3HCC1-210ENST00000625275 HIST1H2BLQ99880 126 aa12.98□□□□□ -0.33
R3HCC1-210ENST00000625275 CHAC1Q9BUX1 264 aa12.98□□□□□ -0.33
R3HCC1-210ENST00000625275 CDKN2A-AS1Q9UH64 79 aa12.98□□□□□ -0.33
R3HCC1-210ENST00000625275 DNAH8Q96JB1 4490 aa12.98□□□□□ -0.33
R3HCC1-210ENST00000625275 IGLV5-45A0A087WSX0 123 aa12.97□□□□□ -0.33
R3HCC1-210ENST00000625275 A0A087WZ39 114 aa12.97□□□□□ -0.33
R3HCC1-210ENST00000625275 MALP21145 153 aa12.97□□□□□ -0.33
R3HCC1-210ENST00000625275 MRPL35Q9NZE8 188 aaKnown RBP12.97□□□□□ -0.33
R3HCC1-210ENST00000625275 F8VRH5 84 aa12.97□□□□□ -0.33
R3HCC1-210ENST00000625275 SYS1-DBNDD2H3BUS1 97 aa12.97□□□□□ -0.33
R3HCC1-210ENST00000625275 LINC00469Q8N7U9 141 aa12.97□□□□□ -0.33
R3HCC1-210ENST00000625275 C11orf86A6NJI1 115 aa12.96□□□□□ -0.34
R3HCC1-210ENST00000625275 IGHV1-58A0A0C4DH39 117 aa12.95□□□□□ -0.34
R3HCC1-210ENST00000625275 C3orf79P0CE67 100 aa12.95□□□□□ -0.34
R3HCC1-210ENST00000625275 LINC01620Q4KN68 170 aa12.95□□□□□ -0.34
R3HCC1-210ENST00000625275 CFAP161Q6P656 301 aa12.95□□□□□ -0.34
R3HCC1-210ENST00000625275 MYCBP2O75592 4640 aa12.93□□□□□ -0.34
R3HCC1-210ENST00000625275 GVQW2A0A096LPI5 108 aaPredicted RBP12.93□□□□□ -0.34
R3HCC1-210ENST00000625275 ZNF22P17026 224 aaPredicted RBP12.93□□□□□ -0.34
R3HCC1-210ENST00000625275 KRTDAPP60985 99 aa12.93□□□□□ -0.34
R3HCC1-210ENST00000625275 HIGD2BQ4VC39 106 aa12.93□□□□□ -0.34
R3HCC1-210ENST00000625275 C14orf177Q52M58 125 aa12.93□□□□□ -0.34
R3HCC1-210ENST00000625275 PMCHL2Q9BQD1 86 aa12.93□□□□□ -0.34
R3HCC1-210ENST00000625275 hDV102S1A0JD36 115 aa12.92□□□□□ -0.34
R3HCC1-210ENST00000625275 APOMO95445 188 aa12.92□□□□□ -0.34
R3HCC1-210ENST00000625275 LINC01561Q8N1V8 128 aa12.92□□□□□ -0.34
R3HCC1-210ENST00000625275 IGHV3-64A0A075B6Q5 118 aa12.91□□□□□ -0.34
R3HCC1-210ENST00000625275 PET117Q6UWS5 81 aa12.91□□□□□ -0.34
R3HCC1-210ENST00000625275 LINC00528Q8N1L1 170 aa12.91□□□□□ -0.34
R3HCC1-210ENST00000625275 PLA2G1BP04054 148 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms