RNA–Protein interactions for RNA: ENST00000622107.4

LTBP4-237, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 4

Gene LTBP4, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-237ENST00000622107 TRAPPC1Q9Y5R8 145 aa9.67□□□□□ -0.86
LTBP4-237ENST00000622107 GVQW2A0A096LPI5 108 aaPredicted RBP9.66□□□□□ -0.86
LTBP4-237ENST00000622107 TGIF2-C20orf24A0A0A6YYL0 155 aa9.66□□□□□ -0.86
LTBP4-237ENST00000622107 FA2HQ7L5A8 372 aa9.66□□□□□ -0.86
LTBP4-237ENST00000622107 SCXQ7RTU7 201 aa9.66□□□□□ -0.86
LTBP4-237ENST00000622107 DPH3Q96FX2 82 aa9.66□□□□□ -0.86
LTBP4-237ENST00000622107 FLG2Q5D862 2391 aaPredicted RBP9.65□□□□□ -0.86
LTBP4-237ENST00000622107 NPSP0C0P6 89 aa9.65□□□□□ -0.86
LTBP4-237ENST00000622107 LINC00528Q8N1L1 170 aa9.65□□□□□ -0.86
LTBP4-237ENST00000622107 ALKBH7Q9BT30 221 aaPredicted RBP9.65□□□□□ -0.86
LTBP4-237ENST00000622107 VCX2Q9H322 139 aa9.65□□□□□ -0.86
LTBP4-237ENST00000622107 PLA2G1BP04054 148 aaKnown RBP9.64□□□□□ -0.87
LTBP4-237ENST00000622107 OPRPNQ99935 248 aaPredicted RBP9.64□□□□□ -0.87
LTBP4-237ENST00000622107 CHAC1Q9BUX1 264 aa9.64□□□□□ -0.87
LTBP4-237ENST00000622107 IGLV4-3A0A075B6K6 122 aa9.63□□□□□ -0.87
LTBP4-237ENST00000622107 C5orf38Q86SI9 138 aa9.63□□□□□ -0.87
LTBP4-237ENST00000622107 CARD19Q96LW7 228 aa9.62□□□□□ -0.87
LTBP4-237ENST00000622107 SEC11AP67812 179 aa9.61□□□□□ -0.87
LTBP4-237ENST00000622107 SYCNQ0VAF6 134 aa9.61□□□□□ -0.87
LTBP4-237ENST00000622107 SCGB3A1Q96QR1 104 aa9.61□□□□□ -0.87
LTBP4-237ENST00000622107 TIMM17AQ99595 171 aa9.61□□□□□ -0.87
LTBP4-237ENST00000622107 RAB5BP61020 215 aa9.6□□□□□ -0.87
LTBP4-237ENST00000622107 SDIM1Q6ZPB5 146 aa9.6□□□□□ -0.87
LTBP4-237ENST00000622107 OR10D4PQ8NGN7 298 aa9.6□□□□□ -0.87
LTBP4-237ENST00000622107 CIRBP-AS1Q8TBR5 109 aa9.6□□□□□ -0.87
LTBP4-237ENST00000622107 TOMM6Q96B49 74 aa9.6□□□□□ -0.87
LTBP4-237ENST00000622107 CAMK2N2Q96S95 79 aa9.6□□□□□ -0.87
LTBP4-237ENST00000622107 IGLV4-69A0A075B6H9 119 aa9.59□□□□□ -0.87
LTBP4-237ENST00000622107 SPAG11BQ08648 103 aa9.59□□□□□ -0.87
LTBP4-237ENST00000622107 ERASQ7Z444 233 aa9.59□□□□□ -0.87
LTBP4-237ENST00000622107 ORAOV1Q8WV07 137 aa9.59□□□□□ -0.87
LTBP4-237ENST00000622107 LINC00474Q9P2X8 69 aa9.59□□□□□ -0.87
LTBP4-237ENST00000622107 IGIPA6NJ69 53 aa9.58□□□□□ -0.88
LTBP4-237ENST00000622107 SLPIP03973 132 aa9.58□□□□□ -0.88
LTBP4-237ENST00000622107 COX6A2Q02221 97 aa9.58□□□□□ -0.88
LTBP4-237ENST00000622107 LINC00526Q96FQ7 95 aa9.58□□□□□ -0.88
LTBP4-237ENST00000622107 C2orf48Q96LS8 159 aa9.58□□□□□ -0.88
LTBP4-237ENST00000622107 GEMIN7Q9H840 131 aaKnown RBP9.58□□□□□ -0.88
LTBP4-237ENST00000622107 IGHV3OR16-9A0A0B4J2B5 98 aa9.57□□□□□ -0.88
LTBP4-237ENST00000622107 F8WDY8 70 aa9.57□□□□□ -0.88
LTBP4-237ENST00000622107 SLC7A5P1Q8MH63 180 aa9.57□□□□□ -0.88
LTBP4-237ENST00000622107 AMELXQ99217 191 aa9.57□□□□□ -0.88
LTBP4-237ENST00000622107 IGKV2-24A0A0C4DH68 120 aa9.56□□□□□ -0.88
LTBP4-237ENST00000622107 LINC00614P0C842 121 aa9.56□□□□□ -0.88
LTBP4-237ENST00000622107 UBE2D1P51668 147 aa9.56□□□□□ -0.88
LTBP4-237ENST00000622107 HERVK_113P63121 156 aa9.56□□□□□ -0.88
LTBP4-237ENST00000622107 LINC00242Q5T6M2 205 aa9.56□□□□□ -0.88
LTBP4-237ENST00000622107 FAM104AQ969W3 186 aa9.56□□□□□ -0.88
LTBP4-237ENST00000622107 PACRGQ96M98 296 aaPredicted RBP9.56□□□□□ -0.88
LTBP4-237ENST00000622107 A0A087WZ39 114 aa9.55□□□□□ -0.88
LTBP4-237ENST00000622107 LOC107984640A0A0U1RRK4 108 aa9.55□□□□□ -0.88
LTBP4-237ENST00000622107 LINC01546A6NGU7 62 aa9.55□□□□□ -0.88
LTBP4-237ENST00000622107 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.55□□□□□ -0.88
LTBP4-237ENST00000622107 NDUFA1O15239 70 aa9.55□□□□□ -0.88
LTBP4-237ENST00000622107 PRSS2P07478 247 aa9.55□□□□□ -0.88
LTBP4-237ENST00000622107 MAJINQ3KP22 176 aa9.55□□□□□ -0.88
LTBP4-237ENST00000622107 C18orf32Q8TCD1 76 aa9.55□□□□□ -0.88
LTBP4-237ENST00000622107 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.55□□□□□ -0.88
LTBP4-237ENST00000622107 LINC01561Q8N1V8 128 aa9.54□□□□□ -0.88
LTBP4-237ENST00000622107 Q6ZRU5 148 aa9.53□□□□□ -0.88
LTBP4-237ENST00000622107 CBLN2Q8IUK8 224 aa9.53□□□□□ -0.88
LTBP4-237ENST00000622107 SPACA4Q8TDM5 124 aa9.53□□□□□ -0.88
LTBP4-237ENST00000622107 PKHD1L1Q86WI1 4243 aa9.52□□□□□ -0.89
LTBP4-237ENST00000622107 HBDP02042 147 aa9.52□□□□□ -0.89
LTBP4-237ENST00000622107 CHTF8P0CG12 524 aa9.52□□□□□ -0.89
LTBP4-237ENST00000622107 CIRBPQ14011 172 aaKnown RBP9.52□□□□□ -0.89
LTBP4-237ENST00000622107 PMVKQ15126 192 aa9.52□□□□□ -0.89
LTBP4-237ENST00000622107 ZC2HC1BQ5TFG8 222 aa9.52□□□□□ -0.89
LTBP4-237ENST00000622107 LINC00173Q6ZV60 143 aa9.52□□□□□ -0.89
LTBP4-237ENST00000622107 FAT3Q8TDW7 4589 aa9.51□□□□□ -0.89
LTBP4-237ENST00000622107 A0A087WYN8 130 aa9.51□□□□□ -0.89
LTBP4-237ENST00000622107 J3QL48 77 aa9.51□□□□□ -0.89
LTBP4-237ENST00000622107 NDUFA6P56556 154 aa9.51□□□□□ -0.89
LTBP4-237ENST00000622107 RPL18AQ02543 176 aaKnown RBP9.51□□□□□ -0.89
LTBP4-237ENST00000622107 GAGE2BQ13066 116 aa9.51□□□□□ -0.89
LTBP4-237ENST00000622107 RNF151Q2KHN1 245 aa9.51□□□□□ -0.89
LTBP4-237ENST00000622107 FAM19A3Q7Z5A8 133 aa9.51□□□□□ -0.89
LTBP4-237ENST00000622107 STPG4Q8N801 248 aa9.51□□□□□ -0.89
LTBP4-237ENST00000622107 C7orf33Q8WU49 177 aa9.51□□□□□ -0.89
LTBP4-237ENST00000622107 MRPL35Q9NZE8 188 aaKnown RBP9.51□□□□□ -0.89
LTBP4-237ENST00000622107 TOMM7Q9P0U1 55 aa9.51□□□□□ -0.89
LTBP4-237ENST00000622107 LRP1Q07954 4544 aaKnown RBP9.5□□□□□ -0.89
LTBP4-237ENST00000622107 PANO1I0J062 215 aa9.5□□□□□ -0.89
LTBP4-237ENST00000622107 ATP5LO75964 103 aa9.5□□□□□ -0.89
LTBP4-237ENST00000622107 KRTAP10-4P60372 401 aaPredicted RBP9.5□□□□□ -0.89
LTBP4-237ENST00000622107 CKS1BP61024 79 aa9.5□□□□□ -0.89
LTBP4-237ENST00000622107 RPL37AP61513 92 aaKnown RBP9.5□□□□□ -0.89
LTBP4-237ENST00000622107 LINC00469Q8N7U9 141 aa9.5□□□□□ -0.89
LTBP4-237ENST00000622107 A0A096LNI7 61 aa9.49□□□□□ -0.89
LTBP4-237ENST00000622107 C6orf226Q5I0X4 101 aa9.49□□□□□ -0.89
LTBP4-237ENST00000622107 BAGE3Q86Y29 109 aa9.49□□□□□ -0.89
LTBP4-237ENST00000622107 CHCHD1Q96BP2 118 aaKnown RBP9.49□□□□□ -0.89
LTBP4-237ENST00000622107 YPEL4Q96NS1 127 aa9.49□□□□□ -0.89
LTBP4-237ENST00000622107 A0A0J9YXV3 536 aa9.48□□□□□ -0.89
LTBP4-237ENST00000622107 TINCRA0A1B0GVN0 87 aa9.48□□□□□ -0.89
LTBP4-237ENST00000622107 H3BRM9 83 aa9.48□□□□□ -0.89
LTBP4-237ENST00000622107 CST9LQ9H4G1 147 aa9.48□□□□□ -0.89
LTBP4-237ENST00000622107 PLAC8Q9NZF1 115 aa9.48□□□□□ -0.89
LTBP4-237ENST00000622107 TRBV30A0A0K0K1B3 111 aa9.47□□□□□ -0.89
LTBP4-237ENST00000622107 KRTAP29-1A8MX34 341 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms