RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 VPREB1P12018 145 aa7.28□□□□□ -1.24
COL4A6-210ENST00000621266 TNFRSF13BO14836 293 aaPredicted RBP7.28□□□□□ -1.24
COL4A6-210ENST00000621266 C14orf177Q52M58 125 aa7.28□□□□□ -1.24
COL4A6-210ENST00000621266 Q6YL49 198 aa7.28□□□□□ -1.24
COL4A6-210ENST00000621266 C1orf229Q6ZS94 237 aaPredicted RBP7.28□□□□□ -1.24
COL4A6-210ENST00000621266 Q6ZPA2 131 aa7.28□□□□□ -1.24
COL4A6-210ENST00000621266 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.28□□□□□ -1.24
COL4A6-210ENST00000621266 UBE2D4Q9Y2X8 147 aa7.28□□□□□ -1.24
COL4A6-210ENST00000621266 HILS1P60008 231 aa7.28□□□□□ -1.24
COL4A6-210ENST00000621266 PYGO1Q9Y3Y4 419 aa7.28□□□□□ -1.24
COL4A6-210ENST00000621266 ZNF73O43830 326 aaPredicted RBP7.27□□□□□ -1.24
COL4A6-210ENST00000621266 IGLV2-11P01706 119 aa7.27□□□□□ -1.24
COL4A6-210ENST00000621266 LINC00482Q8N8I6 264 aa7.27□□□□□ -1.24
COL4A6-210ENST00000621266 ODF3Q96PU9 254 aa7.27□□□□□ -1.24
COL4A6-210ENST00000621266 KRTAP10-9P60411 292 aa7.27□□□□□ -1.25
COL4A6-210ENST00000621266 NUP210LQ5VU65 1888 aa7.27□□□□□ -1.25
COL4A6-210ENST00000621266 SPINK1P00995 79 aa7.27□□□□□ -1.25
COL4A6-210ENST00000621266 UBE2D1P51668 147 aa7.27□□□□□ -1.25
COL4A6-210ENST00000621266 SYCNQ0VAF6 134 aa7.27□□□□□ -1.25
COL4A6-210ENST00000621266 LINC00574Q9H8X3 128 aa7.27□□□□□ -1.25
COL4A6-210ENST00000621266 LINC01547P58512 204 aaPredicted RBP7.27□□□□□ -1.25
COL4A6-210ENST00000621266 X6R8D5 127 aa7.27□□□□□ -1.25
COL4A6-210ENST00000621266 PTPN13Q12923 2485 aa7.27□□□□□ -1.25
COL4A6-210ENST00000621266 ATRXP46100 2492 aa7.27□□□□□ -1.25
COL4A6-210ENST00000621266 ODF3BA8MYP8 253 aa7.27□□□□□ -1.25
COL4A6-210ENST00000621266 LOC100131303A0A0U1RQF7 123 aa7.26□□□□□ -1.25
COL4A6-210ENST00000621266 LINC00310P59036 64 aa7.26□□□□□ -1.25
COL4A6-210ENST00000621266 UBE2D2P62837 147 aa7.26□□□□□ -1.25
COL4A6-210ENST00000621266 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.26□□□□□ -1.25
COL4A6-210ENST00000621266 Q9UF83 564 aa7.26□□□□□ -1.25
COL4A6-210ENST00000621266 IGLV2-18A0A075B6J9 118 aa7.26□□□□□ -1.25
COL4A6-210ENST00000621266 Q8N814 137 aa7.26□□□□□ -1.25
COL4A6-210ENST00000621266 PCDH15Q96QU1 1955 aa7.25□□□□□ -1.25
COL4A6-210ENST00000621266 FSTL3O95633 263 aa7.25□□□□□ -1.25
COL4A6-210ENST00000621266 CDSNQ15517 529 aa7.25□□□□□ -1.25
COL4A6-210ENST00000621266 LINC00959A0A1B0GUT2 108 aa7.24□□□□□ -1.25
COL4A6-210ENST00000621266 H0Y9P7 68 aa7.24□□□□□ -1.25
COL4A6-210ENST00000621266 TMEM254Q8TBM7 123 aa7.24□□□□□ -1.25
COL4A6-210ENST00000621266 PRM2P04554 102 aa7.24□□□□□ -1.25
COL4A6-210ENST00000621266 K7EQG2 157 aa7.24□□□□□ -1.25
COL4A6-210ENST00000621266 RNASE3P12724 160 aaKnown RBP7.24□□□□□ -1.25
COL4A6-210ENST00000621266 UBE2D3P61077 147 aa7.24□□□□□ -1.25
COL4A6-210ENST00000621266 PRR9Q5T870 116 aa7.24□□□□□ -1.25
COL4A6-210ENST00000621266 TANC2Q9HCD6 1990 aa7.24□□□□□ -1.25
COL4A6-210ENST00000621266 PRR3P79522 188 aaKnown RBP7.23□□□□□ -1.25
COL4A6-210ENST00000621266 CD164L2Q6UWJ8 174 aa7.23□□□□□ -1.25
COL4A6-210ENST00000621266 C11orf21Q9P2W6 132 aa7.23□□□□□ -1.25
COL4A6-210ENST00000621266 TNCP24821 2201 aa7.23□□□□□ -1.25
COL4A6-210ENST00000621266 BBC3Q96PG8 261 aaPredicted RBP7.23□□□□□ -1.25
COL4A6-210ENST00000621266 URB1-AS1Q96HZ7 61 aa7.23□□□□□ -1.25
COL4A6-210ENST00000621266 NCOR2Q9Y618 2525 aa7.23□□□□□ -1.25
COL4A6-210ENST00000621266 NCOA6Q14686 2063 aaPredicted RBP7.23□□□□□ -1.25
COL4A6-210ENST00000621266 DEFB116Q30KQ4 102 aa7.23□□□□□ -1.25
COL4A6-210ENST00000621266 Q8N6K4 173 aa7.23□□□□□ -1.25
COL4A6-210ENST00000621266 CDIP1Q9H305 208 aa7.23□□□□□ -1.25
COL4A6-210ENST00000621266 SONP18583 2426 aaKnown RBP7.23□□□□□ -1.25
COL4A6-210ENST00000621266 IGHV6-1A0A0B4J1U7 121 aa7.22□□□□□ -1.25
COL4A6-210ENST00000621266 TSPEAR-AS2P59090 65 aa7.22□□□□□ -1.25
COL4A6-210ENST00000621266 C1orf137Q5JT78 98 aa7.22□□□□□ -1.25
COL4A6-210ENST00000621266 TRBV6-4A0A1B0GX49 114 aa7.22□□□□□ -1.25
COL4A6-210ENST00000621266 DEFB131BA0A096LNP1 70 aa7.22□□□□□ -1.25
COL4A6-210ENST00000621266 C10orf25Q5T742 122 aa7.22□□□□□ -1.25
COL4A6-210ENST00000621266 LINC00575Q6W349 94 aa7.22□□□□□ -1.25
COL4A6-210ENST00000621266 EIF4EBP1Q13541 118 aaPredicted RBP7.21□□□□□ -1.25
COL4A6-210ENST00000621266 C10orf99Q6UWK7 81 aa7.21□□□□□ -1.25
COL4A6-210ENST00000621266 COX17Q14061 63 aa7.21□□□□□ -1.26
COL4A6-210ENST00000621266 PLAC8L1A1L4L8 177 aa7.21□□□□□ -1.26
COL4A6-210ENST00000621266 C18orf65Q6ZTR6 163 aa7.21□□□□□ -1.26
COL4A6-210ENST00000621266 C9orf116Q5BN46 136 aaPredicted RBP7.21□□□□□ -1.26
COL4A6-210ENST00000621266 SPAG11AQ6PDA7 123 aa7.21□□□□□ -1.26
COL4A6-210ENST00000621266 LINC00846Q9NV44 126 aa7.21□□□□□ -1.26
COL4A6-210ENST00000621266 IGLV4-69A0A075B6H9 119 aa7.2□□□□□ -1.26
COL4A6-210ENST00000621266 C10orf142B7Z368 130 aa7.2□□□□□ -1.26
COL4A6-210ENST00000621266 POLR2KP53803 58 aaKnown RBP7.2□□□□□ -1.26
COL4A6-210ENST00000621266 ADAMTSL4-AS1Q5T5F5 129 aa7.2□□□□□ -1.26
COL4A6-210ENST00000621266 NAV2Q8IVL1 2488 aa7.2□□□□□ -1.26
COL4A6-210ENST00000621266 ZNF706Q9Y5V0 76 aaPredicted RBP7.2□□□□□ -1.26
COL4A6-210ENST00000621266 RPL28P46779 137 aaKnown RBP7.2□□□□□ -1.26
COL4A6-210ENST00000621266 DEFB114Q30KQ6 69 aa7.2□□□□□ -1.26
COL4A6-210ENST00000621266 OXLD1Q5BKU9 147 aa7.2□□□□□ -1.26
COL4A6-210ENST00000621266 CRIP3Q6Q6R5 217 aa7.2□□□□□ -1.26
COL4A6-210ENST00000621266 IGIPA6NJ69 53 aa7.2□□□□□ -1.26
COL4A6-210ENST00000621266 COX6A2Q02221 97 aa7.2□□□□□ -1.26
COL4A6-210ENST00000621266 C11orf71Q6IPW1 123 aa7.19□□□□□ -1.26
COL4A6-210ENST00000621266 ZNF580Q9UK33 172 aa7.18□□□□□ -1.26
COL4A6-210ENST00000621266 TRBV10-3A0A0K0K1G6 114 aa7.18□□□□□ -1.26
COL4A6-210ENST00000621266 CYSRT1A8MQ03 144 aa7.18□□□□□ -1.26
COL4A6-210ENST00000621266 IGF2RP11717 2491 aa7.18□□□□□ -1.26
COL4A6-210ENST00000621266 Q8IZM0 81 aa7.17□□□□□ -1.26
COL4A6-210ENST00000621266 LIMD2Q9BT23 127 aa7.17□□□□□ -1.26
COL4A6-210ENST00000621266 CDC42SE2Q9NRR3 84 aa7.17□□□□□ -1.26
COL4A6-210ENST00000621266 CCDC168Q8NDH2 2452 aa7.17□□□□□ -1.26
COL4A6-210ENST00000621266 C7orf33Q8WU49 177 aa7.17□□□□□ -1.26
COL4A6-210ENST00000621266 WNK1Q9H4A3 2382 aa7.17□□□□□ -1.26
COL4A6-210ENST00000621266 MUC22E2RYF6 1773 aaPredicted RBP7.16□□□□□ -1.26
COL4A6-210ENST00000621266 LINC00242Q5T6M2 205 aa7.16□□□□□ -1.26
COL4A6-210ENST00000621266 UNQ6190/PRO20217Q6UXQ8 127 aa7.16□□□□□ -1.26
COL4A6-210ENST00000621266 MYO18BQ8IUG5 2567 aa7.16□□□□□ -1.26
COL4A6-210ENST00000621266 MED12LQ86YW9 2145 aa7.16□□□□□ -1.26
COL4A6-210ENST00000621266 HCFC1P51610 2035 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms