RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 FAM222AQ5U5X8 452 aa7.06□□□□□ -1.28
VTA1-205ENST00000620996 X6R8D5 127 aa7.06□□□□□ -1.28
VTA1-205ENST00000620996 FBN1P35555 2871 aaKnown RBP7.06□□□□□ -1.28
VTA1-205ENST00000620996 TRBV10-1A0A0K0K1A3 114 aa7.06□□□□□ -1.28
VTA1-205ENST00000620996 OVOL2Q9BRP0 275 aa7.06□□□□□ -1.28
VTA1-205ENST00000620996 WFDC9Q8NEX5 89 aa7.05□□□□□ -1.28
VTA1-205ENST00000620996 IGKV3OR2-268A0A0C4DH90 116 aa7.05□□□□□ -1.28
VTA1-205ENST00000620996 C9JAW5 83 aa7.05□□□□□ -1.28
VTA1-205ENST00000620996 C9orf153Q5TBE3 101 aa7.05□□□□□ -1.28
VTA1-205ENST00000620996 UBE2D4Q9Y2X8 147 aa7.05□□□□□ -1.28
VTA1-205ENST00000620996 DAZ4Q86SG3 579 aaKnown RBP7.05□□□□□ -1.28
VTA1-205ENST00000620996 DAZ3Q9NR90 486 aaKnown RBP7.05□□□□□ -1.28
VTA1-205ENST00000620996 IGHV4-28A0A0C4DH34 117 aa7.04□□□□□ -1.28
VTA1-205ENST00000620996 MYMXA0A1B0GTQ4 84 aa7.04□□□□□ -1.28
VTA1-205ENST00000620996 UBE2D3P61077 147 aa7.04□□□□□ -1.28
VTA1-205ENST00000620996 UBE2D2P62837 147 aa7.04□□□□□ -1.28
VTA1-205ENST00000620996 PRIMA1Q86XR5 153 aa7.04□□□□□ -1.28
VTA1-205ENST00000620996 A0A0J9YY99 117 aa7.04□□□□□ -1.28
VTA1-205ENST00000620996 LGALS3P17931 250 aaKnown RBP7.04□□□□□ -1.28
VTA1-205ENST00000620996 FHL2Q14192 279 aa7.04□□□□□ -1.28
VTA1-205ENST00000620996 SPANXA1Q9NS26 97 aa7.04□□□□□ -1.28
VTA1-205ENST00000620996 HRCT1Q6UXD1 115 aa7.03□□□□□ -1.28
VTA1-205ENST00000620996 TRAV13-1A0A0B4J241 112 aa7.03□□□□□ -1.28
VTA1-205ENST00000620996 TCL1BO95988 128 aa7.03□□□□□ -1.28
VTA1-205ENST00000620996 GYPEP15421 78 aa7.03□□□□□ -1.28
VTA1-205ENST00000620996 DAD1P61803 113 aa7.03□□□□□ -1.28
VTA1-205ENST00000620996 TRBV6-4A0A1B0GX49 114 aa7.03□□□□□ -1.28
VTA1-205ENST00000620996 NTM-AS1Q6ZSK4 140 aa7.03□□□□□ -1.28
VTA1-205ENST00000620996 KIR2DL5BQ8NHK3 375 aa7.03□□□□□ -1.28
VTA1-205ENST00000620996 TMEM243Q9BU79 118 aa7.03□□□□□ -1.28
VTA1-205ENST00000620996 PYGO1Q9Y3Y4 419 aa7.03□□□□□ -1.28
VTA1-205ENST00000620996 ZNF22P17026 224 aaPredicted RBP7.02□□□□□ -1.29
VTA1-205ENST00000620996 ATP6V0E2Q8NHE4 81 aa7.02□□□□□ -1.29
VTA1-205ENST00000620996 NTN5Q8WTR8 489 aaPredicted RBP7.02□□□□□ -1.29
VTA1-205ENST00000620996 RETNQ9HD89 108 aa7.02□□□□□ -1.29
VTA1-205ENST00000620996 COL6A5A8TX70 2615 aa7.02□□□□□ -1.29
VTA1-205ENST00000620996 KRTAP10-11P60412 298 aa7.02□□□□□ -1.29
VTA1-205ENST00000620996 HERVK_113P63121 156 aa7.02□□□□□ -1.29
VTA1-205ENST00000620996 PLEKHB2Q96CS7 222 aa7.02□□□□□ -1.29
VTA1-205ENST00000620996 TMEM101Q96IK0 257 aa7.02□□□□□ -1.29
VTA1-205ENST00000620996 TSPEAR-AS2P59090 65 aa7.01□□□□□ -1.29
VTA1-205ENST00000620996 C4orf26Q17RF5 130 aa7.01□□□□□ -1.29
VTA1-205ENST00000620996 TMEM126AQ9H061 195 aa7.01□□□□□ -1.29
VTA1-205ENST00000620996 J3QQQ9 107 aa7.01□□□□□ -1.29
VTA1-205ENST00000620996 TRAV8-3A0A0A6YYJ7 113 aa7□□□□□ -1.29
VTA1-205ENST00000620996 TEX49A0A1B0GTD5 131 aa7□□□□□ -1.29
VTA1-205ENST00000620996 PAX4O43316 350 aa7□□□□□ -1.29
VTA1-205ENST00000620996 AMELXQ99217 191 aa7□□□□□ -1.29
VTA1-205ENST00000620996 TIMM21Q9BVV7 248 aa7□□□□□ -1.29
VTA1-205ENST00000620996 HIGD1BQ9P298 99 aa7□□□□□ -1.29
VTA1-205ENST00000620996 CELA1Q9UNI1 258 aa7□□□□□ -1.29
VTA1-205ENST00000620996 PKIGQ9Y2B9 76 aa7□□□□□ -1.29
VTA1-205ENST00000620996 TRAV8-4A0A0B4J246 113 aa7□□□□□ -1.29
VTA1-205ENST00000620996 FAM236AA0A1B0GUQ0 79 aa7□□□□□ -1.29
VTA1-205ENST00000620996 FAM236BA0A1B0GV22 79 aa7□□□□□ -1.29
VTA1-205ENST00000620996 TMEM223A0PJW6 202 aa7□□□□□ -1.29
VTA1-205ENST00000620996 PRB2P02812 416 aaPredicted RBP7□□□□□ -1.29
VTA1-205ENST00000620996 FAM104AQ969W3 186 aa7□□□□□ -1.29
VTA1-205ENST00000620996 LYRM9A8MSI8 78 aa6.99□□□□□ -1.29
VTA1-205ENST00000620996 OR13C6PQ8NH95 151 aa6.99□□□□□ -1.29
VTA1-205ENST00000620996 C1orf43Q9BWL3 253 aa6.99□□□□□ -1.29
VTA1-205ENST00000620996 A8MZ25 164 aa6.99□□□□□ -1.29
VTA1-205ENST00000620996 J3KT08 172 aa6.99□□□□□ -1.29
VTA1-205ENST00000620996 SLC25A20O43772 301 aa6.99□□□□□ -1.29
VTA1-205ENST00000620996 PRO0255Q9UI72 69 aa6.99□□□□□ -1.29
VTA1-205ENST00000620996 PKD1L1Q8TDX9 2849 aa6.99□□□□□ -1.29
VTA1-205ENST00000620996 MIFP14174 115 aa6.98□□□□□ -1.29
VTA1-205ENST00000620996 SPART-AS1P0CW21 52 aa6.98□□□□□ -1.29
VTA1-205ENST00000620996 LEPROTO15243 131 aa6.98□□□□□ -1.29
VTA1-205ENST00000620996 MRPS36P82909 103 aaKnown RBP6.98□□□□□ -1.29
VTA1-205ENST00000620996 TRBV6-8A0A0A6YYG3 113 aa6.97□□□□□ -1.29
VTA1-205ENST00000620996 UBE2D1P51668 147 aa6.97□□□□□ -1.29
VTA1-205ENST00000620996 Q8NAQ8 132 aa6.97□□□□□ -1.29
VTA1-205ENST00000620996 CDKN2A-AS1Q9UH64 79 aa6.97□□□□□ -1.29
VTA1-205ENST00000620996 TINCRA0A1B0GVN0 87 aa6.97□□□□□ -1.29
VTA1-205ENST00000620996 ATP5G1P05496 136 aa6.97□□□□□ -1.29
VTA1-205ENST00000620996 IGHV3-30-3P0DP02 117 aa6.97□□□□□ -1.29
VTA1-205ENST00000620996 CLPSL2Q6UWE3 100 aa6.96□□□□□ -1.29
VTA1-205ENST00000620996 WIPF1O43516 503 aa6.96□□□□□ -1.3
VTA1-205ENST00000620996 COX6A2Q02221 97 aa6.96□□□□□ -1.3
VTA1-205ENST00000620996 Q1RN00 199 aa6.96□□□□□ -1.3
VTA1-205ENST00000620996 LINC00612Q8N6U2 182 aa6.96□□□□□ -1.3
VTA1-205ENST00000620996 CDC42SE2Q9NRR3 84 aa6.96□□□□□ -1.3
VTA1-205ENST00000620996 SBSPONQ8IVN8 264 aa6.95□□□□□ -1.3
VTA1-205ENST00000620996 NOTCH1P46531 2555 aa6.95□□□□□ -1.3
VTA1-205ENST00000620996 IGLV4-60A0A075B6I1 120 aa6.95□□□□□ -1.3
VTA1-205ENST00000620996 VSIG2Q96IQ7 327 aa6.95□□□□□ -1.3
VTA1-205ENST00000620996 NPC2P61916 151 aa6.95□□□□□ -1.3
VTA1-205ENST00000620996 LINC00242Q5T6M2 205 aa6.95□□□□□ -1.3
VTA1-205ENST00000620996 NDUFA12Q9UI09 145 aa6.95□□□□□ -1.3
VTA1-205ENST00000620996 IGHV1-58A0A0C4DH39 117 aa6.94□□□□□ -1.3
VTA1-205ENST00000620996 DEFB121Q5J5C9 76 aa6.94□□□□□ -1.3
VTA1-205ENST00000620996 MRAPQ8TCY5 172 aa6.94□□□□□ -1.3
VTA1-205ENST00000620996 ZNF625Q96I27 306 aaPredicted RBP6.94□□□□□ -1.3
VTA1-205ENST00000620996 A0A0U1RRA0 63 aa6.94□□□□□ -1.3
VTA1-205ENST00000620996 PRSS2P07478 247 aa6.94□□□□□ -1.3
VTA1-205ENST00000620996 DSCR8Q96T75 97 aa6.94□□□□□ -1.3
VTA1-205ENST00000620996 TAL2Q16559 108 aa6.93□□□□□ -1.3
VTA1-205ENST00000620996 GAGE2AQ6NT46 116 aa6.93□□□□□ -1.3
VTA1-205ENST00000620996 TOMM7Q9P0U1 55 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms