RNA–Protein interactions for RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-223ENST00000620632 TEX43Q6ZNM6 134 aa6.96□□□□□ -1.3
TARDBP-223ENST00000620632 C9orf163Q8N9P6 203 aa6.96□□□□□ -1.3
TARDBP-223ENST00000620632 TIMM17AQ99595 171 aa6.96□□□□□ -1.3
TARDBP-223ENST00000620632 KRTAP4-5Q9BYR2 181 aa6.96□□□□□ -1.3
TARDBP-223ENST00000620632 IGHV1-58A0A0C4DH39 117 aa6.95□□□□□ -1.3
TARDBP-223ENST00000620632 COX7A2LO14548 114 aa6.95□□□□□ -1.3
TARDBP-223ENST00000620632 NPSP0C0P6 89 aa6.95□□□□□ -1.3
TARDBP-223ENST00000620632 LINC00614P0C842 121 aa6.95□□□□□ -1.3
TARDBP-223ENST00000620632 CFAP161Q6P656 301 aa6.95□□□□□ -1.3
TARDBP-223ENST00000620632 ERASQ7Z444 233 aa6.95□□□□□ -1.3
TARDBP-223ENST00000620632 SCGB3A1Q96QR1 104 aa6.95□□□□□ -1.3
TARDBP-223ENST00000620632 AP5S1Q9NUS5 200 aa6.95□□□□□ -1.3
TARDBP-223ENST00000620632 PANO1I0J062 215 aa6.94□□□□□ -1.3
TARDBP-223ENST00000620632 Q6ZN92 141 aa6.94□□□□□ -1.3
TARDBP-223ENST00000620632 VCX2Q9H322 139 aa6.94□□□□□ -1.3
TARDBP-223ENST00000620632 G0S2P27469 103 aa6.93□□□□□ -1.3
TARDBP-223ENST00000620632 LINC00310P59036 64 aa6.93□□□□□ -1.3
TARDBP-223ENST00000620632 SDIM1Q6ZPB5 146 aa6.93□□□□□ -1.3
TARDBP-223ENST00000620632 FAM19A3Q7Z5A8 133 aa6.93□□□□□ -1.3
TARDBP-223ENST00000620632 C2orf88Q9BSF0 95 aa6.93□□□□□ -1.3
TARDBP-223ENST00000620632 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.93□□□□□ -1.3
TARDBP-223ENST00000620632 IGLV4-69A0A075B6H9 119 aa6.92□□□□□ -1.3
TARDBP-223ENST00000620632 MALP21145 153 aa6.92□□□□□ -1.3
TARDBP-223ENST00000620632 PDZD11Q5EBL8 140 aa6.92□□□□□ -1.3
TARDBP-223ENST00000620632 SCXQ7RTU7 201 aa6.92□□□□□ -1.3
TARDBP-223ENST00000620632 ABCA13Q86UQ4 5058 aa6.92□□□□□ -1.3
TARDBP-223ENST00000620632 PCLOQ9Y6V0 5065 aa6.91□□□□□ -1.3
TARDBP-223ENST00000620632 IGHV3-64A0A075B6Q5 118 aa6.91□□□□□ -1.3
TARDBP-223ENST00000620632 A0A087WZ39 114 aa6.91□□□□□ -1.3
TARDBP-223ENST00000620632 A0A0J9YXV3 536 aa6.91□□□□□ -1.3
TARDBP-223ENST00000620632 HBDP02042 147 aa6.91□□□□□ -1.3
TARDBP-223ENST00000620632 SMR3BP02814 79 aaPredicted RBP6.91□□□□□ -1.3
TARDBP-223ENST00000620632 CHTF8P0CG12 524 aa6.91□□□□□ -1.3
TARDBP-223ENST00000620632 VPS13BQ7Z7G8 4022 aa6.91□□□□□ -1.3
TARDBP-223ENST00000620632 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.9□□□□□ -1.3
TARDBP-223ENST00000620632 LINC01549A6NIU2 74 aa6.9□□□□□ -1.3
TARDBP-223ENST00000620632 ZNF561-AS1K7EIQ3 104 aa6.9□□□□□ -1.3
TARDBP-223ENST00000620632 RAB5BP61020 215 aa6.9□□□□□ -1.3
TARDBP-223ENST00000620632 SPAG11BQ08648 103 aa6.9□□□□□ -1.3
TARDBP-223ENST00000620632 PAPPA-AS1Q5QFB9 102 aa6.9□□□□□ -1.3
TARDBP-223ENST00000620632 Q6ZRU5 148 aa6.9□□□□□ -1.3
TARDBP-223ENST00000620632 Q8N1X5 172 aa6.9□□□□□ -1.3
TARDBP-223ENST00000620632 ORAOV1Q8WV07 137 aa6.9□□□□□ -1.3
TARDBP-223ENST00000620632 CST9LQ9H4G1 147 aa6.9□□□□□ -1.3
TARDBP-223ENST00000620632 NUPR1O60356 82 aa6.89□□□□□ -1.31
TARDBP-223ENST00000620632 APOMO95445 188 aa6.89□□□□□ -1.31
TARDBP-223ENST00000620632 SYCNQ0VAF6 134 aa6.89□□□□□ -1.31
TARDBP-223ENST00000620632 KIAA0087Q14695 138 aa6.89□□□□□ -1.31
TARDBP-223ENST00000620632 PMVKQ15126 192 aa6.89□□□□□ -1.31
TARDBP-223ENST00000620632 OR10D4PQ8NGN7 298 aa6.89□□□□□ -1.31
TARDBP-223ENST00000620632 CIRBP-AS1Q8TBR5 109 aa6.89□□□□□ -1.31
TARDBP-223ENST00000620632 CHCHD1Q96BP2 118 aaKnown RBP6.89□□□□□ -1.31
TARDBP-223ENST00000620632 CARD19Q96LW7 228 aa6.89□□□□□ -1.31
TARDBP-223ENST00000620632 CHAC1Q9BUX1 264 aa6.89□□□□□ -1.31
TARDBP-223ENST00000620632 CDKN2A-AS1Q9UH64 79 aa6.89□□□□□ -1.31
TARDBP-223ENST00000620632 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.88□□□□□ -1.31
TARDBP-223ENST00000620632 CIRBPQ14011 172 aaKnown RBP6.88□□□□□ -1.31
TARDBP-223ENST00000620632 C10orf25Q5T742 122 aa6.88□□□□□ -1.31
TARDBP-223ENST00000620632 BAGE3Q86Y29 109 aa6.88□□□□□ -1.31
TARDBP-223ENST00000620632 FAM19A2Q8N3H0 131 aa6.88□□□□□ -1.31
TARDBP-223ENST00000620632 CAMK2N2Q96S95 79 aa6.88□□□□□ -1.31
TARDBP-223ENST00000620632 IGLV5-45A0A087WSX0 123 aa6.87□□□□□ -1.31
TARDBP-223ENST00000620632 A0A096LNI7 61 aa6.87□□□□□ -1.31
TARDBP-223ENST00000620632 TINCRA0A1B0GVN0 87 aa6.87□□□□□ -1.31
TARDBP-223ENST00000620632 ATP6V1G1O75348 118 aa6.87□□□□□ -1.31
TARDBP-223ENST00000620632 SERF1AO75920 110 aa6.87□□□□□ -1.31
TARDBP-223ENST00000620632 HERVK_113P63121 156 aa6.87□□□□□ -1.31
TARDBP-223ENST00000620632 LINC01561Q8N1V8 128 aa6.87□□□□□ -1.31
TARDBP-223ENST00000620632 SPACA4Q8TDM5 124 aa6.87□□□□□ -1.31
TARDBP-223ENST00000620632 C2orf48Q96LS8 159 aa6.87□□□□□ -1.31
TARDBP-223ENST00000620632 NDUFA6P56556 154 aa6.86□□□□□ -1.31
TARDBP-223ENST00000620632 Q5VSD8 79 aa6.86□□□□□ -1.31
TARDBP-223ENST00000620632 UNQ6190/PRO20217Q6UXQ8 127 aa6.86□□□□□ -1.31
TARDBP-223ENST00000620632 GEMIN7Q9H840 131 aaKnown RBP6.86□□□□□ -1.31
TARDBP-223ENST00000620632 IGKV2-24A0A0C4DH68 120 aa6.85□□□□□ -1.31
TARDBP-223ENST00000620632 SMIM1B2RUZ4 78 aa6.85□□□□□ -1.31
TARDBP-223ENST00000620632 HIST1H2BKO60814 126 aa6.85□□□□□ -1.31
TARDBP-223ENST00000620632 HSBP1O75506 76 aa6.85□□□□□ -1.31
TARDBP-223ENST00000620632 ATP5LO75964 103 aa6.85□□□□□ -1.31
TARDBP-223ENST00000620632 HIST1H2BJP06899 126 aa6.85□□□□□ -1.31
TARDBP-223ENST00000620632 IGLC3P0DOY3 106 aa6.85□□□□□ -1.31
TARDBP-223ENST00000620632 HIST1H2BOP23527 126 aa6.85□□□□□ -1.31
TARDBP-223ENST00000620632 HIST1H2BBP33778 126 aa6.85□□□□□ -1.31
TARDBP-223ENST00000620632 HIST1H2BDP58876 126 aa6.85□□□□□ -1.31
TARDBP-223ENST00000620632 HIST1H2BCP62807 126 aa6.85□□□□□ -1.31
TARDBP-223ENST00000620632 SEC11AP67812 179 aa6.85□□□□□ -1.31
TARDBP-223ENST00000620632 HIST2H2BEQ16778 126 aa6.85□□□□□ -1.31
TARDBP-223ENST00000620632 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.85□□□□□ -1.31
TARDBP-223ENST00000620632 C2orf82Q6UX34 121 aa6.85□□□□□ -1.31
TARDBP-223ENST00000620632 LINC00469Q8N7U9 141 aa6.85□□□□□ -1.31
TARDBP-223ENST00000620632 HIST1H2BHQ93079 126 aa6.85□□□□□ -1.31
TARDBP-223ENST00000620632 HIST1H2BNQ99877 126 aa6.85□□□□□ -1.31
TARDBP-223ENST00000620632 HIST1H2BMQ99879 126 aa6.85□□□□□ -1.31
TARDBP-223ENST00000620632 C6orf48Q9UBA6 75 aa6.85□□□□□ -1.31
TARDBP-223ENST00000620632 A0A087WYN8 130 aa6.84□□□□□ -1.31
TARDBP-223ENST00000620632 IFI27L1Q96BM0 104 aa6.84□□□□□ -1.31
TARDBP-223ENST00000620632 MRPL35Q9NZE8 188 aaKnown RBP6.84□□□□□ -1.31
TARDBP-223ENST00000620632 C11orf86A6NJI1 115 aa6.83□□□□□ -1.32
TARDBP-223ENST00000620632 EPM2AB3EWF7 344 aa6.83□□□□□ -1.32
TARDBP-223ENST00000620632 NDUFA1O15239 70 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 267.8 ms