RNA–Protein interactions for RNA: ENST00000618819.4

PTPN9-206, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN9, Length 7,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-206ENST00000618819 Q6ZPA2 131 aa10.6□□□□□ -0.71
PTPN9-206ENST00000618819 TRBV10-3A0A0K0K1G6 114 aa10.6□□□□□ -0.71
PTPN9-206ENST00000618819 C11orf21Q9P2W6 132 aa10.6□□□□□ -0.71
PTPN9-206ENST00000618819 Q8N6K4 173 aa10.6□□□□□ -0.71
PTPN9-206ENST00000618819 KPRPQ5T749 579 aaPredicted RBP10.59□□□□□ -0.71
PTPN9-206ENST00000618819 ODF3BA8MYP8 253 aa10.58□□□□□ -0.72
PTPN9-206ENST00000618819 PRLHP81277 87 aa10.58□□□□□ -0.72
PTPN9-206ENST00000618819 PLXNB1O43157 2135 aa10.58□□□□□ -0.72
PTPN9-206ENST00000618819 UNQ6190/PRO20217Q6UXQ8 127 aa10.58□□□□□ -0.72
PTPN9-206ENST00000618819 NBASA2RRP1 2371 aa10.58□□□□□ -0.72
PTPN9-206ENST00000618819 SPINT4Q6UDR6 99 aa10.58□□□□□ -0.72
PTPN9-206ENST00000618819 Q8IZM0 81 aa10.57□□□□□ -0.72
PTPN9-206ENST00000618819 COX6A2Q02221 97 aa10.57□□□□□ -0.72
PTPN9-206ENST00000618819 DAZAP2Q15038 168 aaPredicted RBP10.57□□□□□ -0.72
PTPN9-206ENST00000618819 PLA2G2CQ5R387 149 aa10.57□□□□□ -0.72
PTPN9-206ENST00000618819 ARHGAP32A7KAX9 2087 aa10.57□□□□□ -0.72
PTPN9-206ENST00000618819 TSPEAR-AS2P59090 65 aa10.56□□□□□ -0.72
PTPN9-206ENST00000618819 HCG22E2RYF7 251 aa10.56□□□□□ -0.72
PTPN9-206ENST00000618819 REG3GQ6UW15 175 aa10.56□□□□□ -0.72
PTPN9-206ENST00000618819 POLR2KP53803 58 aaKnown RBP10.55□□□□□ -0.72
PTPN9-206ENST00000618819 CDC42SE2Q9NRR3 84 aa10.55□□□□□ -0.72
PTPN9-206ENST00000618819 LELP1Q5T871 98 aa10.55□□□□□ -0.72
PTPN9-206ENST00000618819 A0A087WSZ3 146 aa10.55□□□□□ -0.72
PTPN9-206ENST00000618819 RPL28P46779 137 aaKnown RBP10.55□□□□□ -0.72
PTPN9-206ENST00000618819 ADAMTSL4-AS1Q5T5F5 129 aa10.54□□□□□ -0.72
PTPN9-206ENST00000618819 HCFC1P51610 2035 aa10.54□□□□□ -0.72
PTPN9-206ENST00000618819 LINC00846Q9NV44 126 aa10.54□□□□□ -0.72
PTPN9-206ENST00000618819 A0A1B0GU69 56 aa10.54□□□□□ -0.72
PTPN9-206ENST00000618819 WISP2O76076 250 aa10.54□□□□□ -0.72
PTPN9-206ENST00000618819 FREM1Q5H8C1 2179 aa10.54□□□□□ -0.72
PTPN9-206ENST00000618819 DENND4CQ5VZ89 1909 aa10.53□□□□□ -0.72
PTPN9-206ENST00000618819 IGFL2Q6UWQ7 119 aa10.53□□□□□ -0.72
PTPN9-206ENST00000618819 ZNF580Q9UK33 172 aa10.53□□□□□ -0.72
PTPN9-206ENST00000618819 TRAV10A0A0B4J240 114 aa10.53□□□□□ -0.72
PTPN9-206ENST00000618819 IGIPA6NJ69 53 aa10.53□□□□□ -0.72
PTPN9-206ENST00000618819 Q9BRP9 147 aa10.53□□□□□ -0.72
PTPN9-206ENST00000618819 C1orf64Q8NEQ6 169 aa10.52□□□□□ -0.72
PTPN9-206ENST00000618819 LIMD2Q9BT23 127 aa10.52□□□□□ -0.72
PTPN9-206ENST00000618819 PLXNB3Q9ULL4 1909 aa10.52□□□□□ -0.72
PTPN9-206ENST00000618819 LINC00242Q5T6M2 205 aa10.52□□□□□ -0.72
PTPN9-206ENST00000618819 Q6YL49 198 aa10.52□□□□□ -0.73
PTPN9-206ENST00000618819 A8MTW9 85 aa10.52□□□□□ -0.73
PTPN9-206ENST00000618819 C6orf223Q8N319 242 aa10.51□□□□□ -0.73
PTPN9-206ENST00000618819 EIF4EBP1Q13541 118 aaPredicted RBP10.51□□□□□ -0.73
PTPN9-206ENST00000618819 C18orf65Q6ZTR6 163 aa10.51□□□□□ -0.73
PTPN9-206ENST00000618819 PRORYQ9H606 182 aa10.51□□□□□ -0.73
PTPN9-206ENST00000618819 LINC00310P59036 64 aa10.51□□□□□ -0.73
PTPN9-206ENST00000618819 SMIM1B2RUZ4 78 aa10.51□□□□□ -0.73
PTPN9-206ENST00000618819 C7orf65Q6ZTY9 151 aa10.51□□□□□ -0.73
PTPN9-206ENST00000618819 LY6G6CO95867 125 aa10.5□□□□□ -0.73
PTPN9-206ENST00000618819 hDV103S1A0JD37 113 aa10.5□□□□□ -0.73
PTPN9-206ENST00000618819 PIP4P1Q86T03 277 aa10.5□□□□□ -0.73
PTPN9-206ENST00000618819 SMIM29Q86T20 159 aa10.5□□□□□ -0.73
PTPN9-206ENST00000618819 URB1-AS1Q96HZ7 61 aa10.49□□□□□ -0.73
PTPN9-206ENST00000618819 ZNF106Q9H2Y7 1883 aaKnown RBP10.49□□□□□ -0.73
PTPN9-206ENST00000618819 PRRC2AP48634 2157 aaKnown RBP10.49□□□□□ -0.73
PTPN9-206ENST00000618819 LMO4P61968 165 aa10.49□□□□□ -0.73
PTPN9-206ENST00000618819 IGKV2D-30A0A075B6S6 120 aa10.49□□□□□ -0.73
PTPN9-206ENST00000618819 IGKV2-30P06310 120 aa10.49□□□□□ -0.73
PTPN9-206ENST00000618819 IGLV8-61A0A075B6I0 122 aa10.47□□□□□ -0.73
PTPN9-206ENST00000618819 LINC00474Q9P2X8 69 aa10.47□□□□□ -0.73
PTPN9-206ENST00000618819 C2orf16Q68DN1 1984 aa10.47□□□□□ -0.73
PTPN9-206ENST00000618819 CDIP1Q9H305 208 aa10.47□□□□□ -0.73
PTPN9-206ENST00000618819 SORL1Q92673 2214 aa10.47□□□□□ -0.73
PTPN9-206ENST00000618819 KLLNB2CW77 178 aa10.46□□□□□ -0.73
PTPN9-206ENST00000618819 CXCL6P80162 114 aa10.46□□□□□ -0.74
PTPN9-206ENST00000618819 PRR14LQ5THK1 2151 aa10.46□□□□□ -0.74
PTPN9-206ENST00000618819 LINC00574Q9H8X3 128 aa10.46□□□□□ -0.74
PTPN9-206ENST00000618819 FSTL3O95633 263 aa10.45□□□□□ -0.74
PTPN9-206ENST00000618819 INAFM1C9JVW0 142 aa10.45□□□□□ -0.74
PTPN9-206ENST00000618819 BRWD3Q6RI45 1802 aa10.44□□□□□ -0.74
PTPN9-206ENST00000618819 IGLV4-60A0A075B6I1 120 aa10.44□□□□□ -0.74
PTPN9-206ENST00000618819 LINC01556Q5JQF7 62 aa10.44□□□□□ -0.74
PTPN9-206ENST00000618819 ANAPC1Q9H1A4 1944 aa10.44□□□□□ -0.74
PTPN9-206ENST00000618819 MRGPRG-AS1Q2M3A8 158 aa10.43□□□□□ -0.74
PTPN9-206ENST00000618819 ATP11AUNQ6ZP68 121 aa10.43□□□□□ -0.74
PTPN9-206ENST00000618819 CHCHD7Q9BUK0 85 aa10.43□□□□□ -0.74
PTPN9-206ENST00000618819 CRIP3Q6Q6R5 217 aa10.43□□□□□ -0.74
PTPN9-206ENST00000618819 C8orf87E5RJ46 101 aa10.42□□□□□ -0.74
PTPN9-206ENST00000618819 EGFEM1PQ0D2K5 195 aa10.42□□□□□ -0.74
PTPN9-206ENST00000618819 EDN2P20800 178 aa10.42□□□□□ -0.74
PTPN9-206ENST00000618819 MUC7Q8TAX7 377 aa10.42□□□□□ -0.74
PTPN9-206ENST00000618819 FSHBP01225 129 aa10.41□□□□□ -0.74
PTPN9-206ENST00000618819 C19orf84I3L1E1 186 aa10.41□□□□□ -0.74
PTPN9-206ENST00000618819 MGAMO43451 1857 aa10.41□□□□□ -0.74
PTPN9-206ENST00000618819 THSD7BQ9C0I4 1608 aa10.4□□□□□ -0.74
PTPN9-206ENST00000618819 MUC4Q99102 2169 aa10.4□□□□□ -0.74
PTPN9-206ENST00000618819 ADAMTS9Q9P2N4 1935 aa10.4□□□□□ -0.74
PTPN9-206ENST00000618819 ZNF702PQ9H963 129 aa10.4□□□□□ -0.75
PTPN9-206ENST00000618819 NUP210Q8TEM1 1887 aaPredicted RBP10.39□□□□□ -0.75
PTPN9-206ENST00000618819 Q6ZTC4 211 aa10.37□□□□□ -0.75
PTPN9-206ENST00000618819 SSBP3-AS1Q7Z2R9 100 aa10.37□□□□□ -0.75
PTPN9-206ENST00000618819 LTBP1Q14766 1721 aa10.37□□□□□ -0.75
PTPN9-206ENST00000618819 CNFNQ9BYD5 112 aa10.37□□□□□ -0.75
PTPN9-206ENST00000618819 EML5Q05BV3 1969 aa10.36□□□□□ -0.75
PTPN9-206ENST00000618819 MDFIQ99750 246 aa10.36□□□□□ -0.75
PTPN9-206ENST00000618819 RIF1Q5UIP0 2472 aaKnown RBP10.36□□□□□ -0.75
PTPN9-206ENST00000618819 ACYP2P14621 99 aa10.35□□□□□ -0.75
PTPN9-206ENST00000618819 A0A1W2PNU3 283 aaPredicted RBP10.35□□□□□ -0.75
PTPN9-206ENST00000618819 C6orf48Q9UBA6 75 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms