RNA–Protein interactions for RNA: ENST00000618440.1

U6.42-201, humanhuman

BASIC

Gene U6, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U6.42-201ENST00000618440 LOC285095A0A1B0GVY8 99 aa-0.44□□□□□ -2.48
U6.42-201ENST00000618440 PIGYQ3MUY2 71 aa-0.44□□□□□ -2.48
U6.42-201ENST00000618440 MRPL54Q6P161 138 aaKnown RBP-0.44□□□□□ -2.48
U6.42-201ENST00000618440 STAB1Q9NY15 2570 aa-0.44□□□□□ -2.48
U6.42-201ENST00000618440 GAPVD1Q14C86 1478 aa-0.44□□□□□ -2.48
U6.42-201ENST00000618440 WDR7Q9Y4E6 1490 aa-0.44□□□□□ -2.48
U6.42-201ENST00000618440 IFNGP01579 166 aa-0.45□□□□□ -2.48
U6.42-201ENST00000618440 C9orf153Q5TBE3 101 aa-0.45□□□□□ -2.48
U6.42-201ENST00000618440 SSPOA2VEC9 5147 aa-0.45□□□□□ -2.48
U6.42-201ENST00000618440 FXYD6-FXYD2A0A087WZ82 144 aa-0.46□□□□□ -2.48
U6.42-201ENST00000618440 UBE2L5PA0A1B0GUS4 154 aa-0.46□□□□□ -2.48
U6.42-201ENST00000618440 UBE2L3P68036 154 aaKnown RBP-0.46□□□□□ -2.48
U6.42-201ENST00000618440 RPL13AP3Q6NVV1 102 aa-0.46□□□□□ -2.48
U6.42-201ENST00000618440 SCAPERQ9BY12 1400 aa-0.47□□□□□ -2.48
U6.42-201ENST00000618440 XRN1Q8IZH2 1706 aaKnown RBP-0.47□□□□□ -2.48
U6.42-201ENST00000618440 A0A1B0GV90 55 aa-0.47□□□□□ -2.48
U6.42-201ENST00000618440 EFCAB10A6NFE3 127 aa-0.47□□□□□ -2.48
U6.42-201ENST00000618440 CHKB-CPT1BH3BT56 60 aa-0.47□□□□□ -2.48
U6.42-201ENST00000618440 K7EQZ3 153 aa-0.47□□□□□ -2.48
U6.42-201ENST00000618440 DLEU1O43261 78 aa-0.47□□□□□ -2.48
U6.42-201ENST00000618440 MGPP08493 103 aa-0.47□□□□□ -2.48
U6.42-201ENST00000618440 ATP5EP56381 51 aaPredicted RBP-0.47□□□□□ -2.48
U6.42-201ENST00000618440 FAM167A-AS1Q96KT0 104 aa-0.47□□□□□ -2.48
U6.42-201ENST00000618440 DPH3P1Q9H4G8 78 aa-0.47□□□□□ -2.48
U6.42-201ENST00000618440 ADGRL2O95490 1459 aa-0.48□□□□□ -2.49
U6.42-201ENST00000618440 COL4A6Q14031 1691 aa-0.48□□□□□ -2.49
U6.42-201ENST00000618440 IGLC1P0CG04 106 aa-0.48□□□□□ -2.49
U6.42-201ENST00000618440 COX6B1P14854 86 aa-0.48□□□□□ -2.49
U6.42-201ENST00000618440 SPRR1BP22528 89 aa-0.48□□□□□ -2.49
U6.42-201ENST00000618440 FAM223AQ8IWN6 122 aa-0.48□□□□□ -2.49
U6.42-201ENST00000618440 TMEM263Q8WUH6 116 aaKnown RBP-0.48□□□□□ -2.49
U6.42-201ENST00000618440 NXT2Q9NPJ8 142 aaKnown RBP-0.48□□□□□ -2.49
U6.42-201ENST00000618440 ABCA3Q99758 1704 aa-0.48□□□□□ -2.49
U6.42-201ENST00000618440 ZANQ9Y493 2812 aa-0.48□□□□□ -2.49
U6.42-201ENST00000618440 FLNAP21333 2647 aaKnown RBP-0.49□□□□□ -2.49
U6.42-201ENST00000618440 SPRR2BP35325 72 aa-0.49□□□□□ -2.49
U6.42-201ENST00000618440 UBE2D3P61077 147 aa-0.49□□□□□ -2.49
U6.42-201ENST00000618440 UBE2D2P62837 147 aa-0.49□□□□□ -2.49
U6.42-201ENST00000618440 C10orf113Q5VZT2 155 aa-0.49□□□□□ -2.49
U6.42-201ENST00000618440 PZPP20742 1482 aa-0.49□□□□□ -2.49
U6.42-201ENST00000618440 GOLGA4Q13439 2230 aaKnown RBP-0.49□□□□□ -2.49
U6.42-201ENST00000618440 MAPKBP1O60336 1514 aa-0.49□□□□□ -2.49
U6.42-201ENST00000618440 ARHGAP5Q13017 1502 aa-0.49□□□□□ -2.49
U6.42-201ENST00000618440 EP300Q09472 2414 aaPredicted RBP-0.49□□□□□ -2.49
U6.42-201ENST00000618440 A0A0G2JMZ2 1700 aa-0.5□□□□□ -2.49
U6.42-201ENST00000618440 WNK1Q9H4A3 2382 aa-0.5□□□□□ -2.49
U6.42-201ENST00000618440 SPTA1P02549 2419 aa-0.5□□□□□ -2.49
U6.42-201ENST00000618440 LINC00959A0A1B0GUT2 108 aa-0.5□□□□□ -2.49
U6.42-201ENST00000618440 UQCR10Q9UDW1 63 aa-0.5□□□□□ -2.49
U6.42-201ENST00000618440 IER3IP1Q9Y5U9 82 aa-0.5□□□□□ -2.49
U6.42-201ENST00000618440 POLA1P09884 1462 aaPredicted RBP-0.5□□□□□ -2.49
U6.42-201ENST00000618440 C1orf167Q5SNV9 1468 aa-0.5□□□□□ -2.49
U6.42-201ENST00000618440 PAPPA2Q9BXP8 1791 aa-0.5□□□□□ -2.49
U6.42-201ENST00000618440 MAP1BP46821 2468 aaKnown RBP-0.51□□□□□ -2.49
U6.42-201ENST00000618440 DCHS2Q6V1P9 2916 aa-0.51□□□□□ -2.49
U6.42-201ENST00000618440 MUC2Q02817 5179 aa-0.51□□□□□ -2.49
U6.42-201ENST00000618440 PRKDCP78527 4128 aaKnown RBP-0.52□□□□□ -2.49
U6.42-201ENST00000618440 TRBV7-4A0A0J9YYF1 115 aa-0.52□□□□□ -2.49
U6.42-201ENST00000618440 GNG4P50150 75 aa-0.52□□□□□ -2.49
U6.42-201ENST00000618440 Q0VG73 95 aa-0.52□□□□□ -2.49
U6.42-201ENST00000618440 ATRQ13535 2644 aa-0.52□□□□□ -2.49
U6.42-201ENST00000618440 FMN2Q9NZ56 1722 aa-0.52□□□□□ -2.49
U6.42-201ENST00000618440 MARF1Q9Y4F3 1742 aaKnown RBP-0.52□□□□□ -2.49
U6.42-201ENST00000618440 COL6A3P12111 3177 aa-0.53□□□□□ -2.49
U6.42-201ENST00000618440 F6UZH7 168 aa-0.53□□□□□ -2.49
U6.42-201ENST00000618440 SNAPC5O75971 98 aa-0.53□□□□□ -2.49
U6.42-201ENST00000618440 GNG11P61952 73 aa-0.53□□□□□ -2.49
U6.42-201ENST00000618440 WHAMMP3Q1A5X7 153 aa-0.53□□□□□ -2.49
U6.42-201ENST00000618440 ARL2-SNX15V9GYD0 113 aa-0.53□□□□□ -2.49
U6.42-201ENST00000618440 PDCD11Q14690 1871 aaKnown RBP-0.53□□□□□ -2.49
U6.42-201ENST00000618440 FAM135AQ9P2D6 1515 aa-0.54□□□□□ -2.5
U6.42-201ENST00000618440 APC2O95996 2303 aa-0.54□□□□□ -2.5
U6.42-201ENST00000618440 FAM24AA6NFZ4 105 aa-0.54□□□□□ -2.5
U6.42-201ENST00000618440 CORTO00230 105 aa-0.54□□□□□ -2.5
U6.42-201ENST00000618440 LINC01600Q96MT4 127 aa-0.54□□□□□ -2.5
U6.42-201ENST00000618440 C2orf88Q9BSF0 95 aa-0.54□□□□□ -2.5
U6.42-201ENST00000618440 FAIMQ9NVQ4 179 aa-0.54□□□□□ -2.5
U6.42-201ENST00000618440 LRP1BQ9NZR2 4599 aa-0.54□□□□□ -2.5
U6.42-201ENST00000618440 FAM223BA6NKX1 122 aa-0.55□□□□□ -2.5
U6.42-201ENST00000618440 PPP3R1P63098 170 aa-0.55□□□□□ -2.5
U6.42-201ENST00000618440 LCN9Q8WX39 176 aa-0.55□□□□□ -2.5
U6.42-201ENST00000618440 SETBP1Q9Y6X0 1596 aa-0.55□□□□□ -2.5
U6.42-201ENST00000618440 TENM2Q9NT68 2774 aa-0.55□□□□□ -2.5
U6.42-201ENST00000618440 NLRP1Q9C000 1473 aa-0.55□□□□□ -2.5
U6.42-201ENST00000618440 KIAA1551Q9HCM1 1747 aa-0.55□□□□□ -2.5
U6.42-201ENST00000618440 MANBALQ9NQG1 85 aa-0.56□□□□□ -2.5
U6.42-201ENST00000618440 URB1O60287 2271 aaKnown RBP-0.56□□□□□ -2.5
U6.42-201ENST00000618440 PLEKHH2Q8IVE3 1493 aa-0.56□□□□□ -2.5
U6.42-201ENST00000618440 TARBP1Q13395 1621 aaKnown RBP-0.56□□□□□ -2.5
U6.42-201ENST00000618440 SRRM2Q9UQ35 2752 aaKnown RBP-0.57□□□□□ -2.5
U6.42-201ENST00000618440 DNAJC13O75165 2243 aa-0.57□□□□□ -2.5
U6.42-201ENST00000618440 NAP1L6A6NFF2 107 aa-0.57□□□□□ -2.5
U6.42-201ENST00000618440 LINC00587B1AMM8 73 aa-0.57□□□□□ -2.5
U6.42-201ENST00000618440 COX6CP09669 75 aa-0.57□□□□□ -2.5
U6.42-201ENST00000618440 UBA52P62987 128 aaKnown RBP-0.57□□□□□ -2.5
U6.42-201ENST00000618440 PRO1854Q9UHT4 67 aa-0.57□□□□□ -2.5
U6.42-201ENST00000618440 SHPRHQ149N8 1683 aa-0.57□□□□□ -2.5
U6.42-201ENST00000618440 ZFYVE16Q7Z3T8 1539 aa-0.58□□□□□ -2.5
U6.42-201ENST00000618440 ANKRD17O75179 2603 aaKnown RBP-0.58□□□□□ -2.5
U6.42-201ENST00000618440 IQSEC2Q5JU85 1478 aa-0.58□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms