RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 PRM2P04554 102 aa11.2□□□□□ -0.62
COL5A1-208ENST00000618395 MUC7Q8TAX7 377 aa11.2□□□□□ -0.62
COL5A1-208ENST00000618395 F8W735 103 aaPredicted RBP11.19□□□□□ -0.62
COL5A1-208ENST00000618395 M0R378 163 aa11.19□□□□□ -0.62
COL5A1-208ENST00000618395 IGKV2-24A0A0C4DH68 120 aa11.19□□□□□ -0.62
COL5A1-208ENST00000618395 CRIP1P50238 77 aa11.19□□□□□ -0.62
COL5A1-208ENST00000618395 SPINK6Q6UWN8 80 aa11.19□□□□□ -0.62
COL5A1-208ENST00000618395 IGKV2-28A0A075B6P5 120 aa11.19□□□□□ -0.62
COL5A1-208ENST00000618395 IGKV2D-28P01615 120 aa11.19□□□□□ -0.62
COL5A1-208ENST00000618395 TMEM89A2RUT3 159 aa11.18□□□□□ -0.62
COL5A1-208ENST00000618395 ZNF73O43830 326 aaPredicted RBP11.18□□□□□ -0.62
COL5A1-208ENST00000618395 CENPFP49454 3210 aa11.17□□□□□ -0.62
COL5A1-208ENST00000618395 KRTAP27-1Q3LI81 207 aa11.17□□□□□ -0.62
COL5A1-208ENST00000618395 HIVEP2P31629 2446 aa11.17□□□□□ -0.62
COL5A1-208ENST00000618395 Q6ZSR3 168 aa11.17□□□□□ -0.62
COL5A1-208ENST00000618395 A0A1B0GU69 56 aa11.17□□□□□ -0.62
COL5A1-208ENST00000618395 P0C879 139 aa11.17□□□□□ -0.62
COL5A1-208ENST00000618395 DEFB1P60022 68 aa11.16□□□□□ -0.62
COL5A1-208ENST00000618395 MAPK1IP1LQ8NDC0 245 aa11.16□□□□□ -0.62
COL5A1-208ENST00000618395 NOTCH2Q04721 2471 aa11.16□□□□□ -0.62
COL5A1-208ENST00000618395 C10orf25Q5T742 122 aa11.16□□□□□ -0.62
COL5A1-208ENST00000618395 TRBV6-8A0A0A6YYG3 113 aa11.15□□□□□ -0.62
COL5A1-208ENST00000618395 ODF3L1Q8IXM7 274 aa11.15□□□□□ -0.62
COL5A1-208ENST00000618395 A0A087WYN8 130 aa11.15□□□□□ -0.62
COL5A1-208ENST00000618395 ZNF843Q8N446 348 aa11.15□□□□□ -0.62
COL5A1-208ENST00000618395 ZNF706Q9Y5V0 76 aaPredicted RBP11.14□□□□□ -0.63
COL5A1-208ENST00000618395 LINC00575Q6W349 94 aa11.14□□□□□ -0.63
COL5A1-208ENST00000618395 CTSZQ9UBR2 303 aa11.14□□□□□ -0.63
COL5A1-208ENST00000618395 LINC00846Q9NV44 126 aa11.14□□□□□ -0.63
COL5A1-208ENST00000618395 TSHBP01222 138 aa11.14□□□□□ -0.63
COL5A1-208ENST00000618395 PCOTHQ58A44 107 aa11.14□□□□□ -0.63
COL5A1-208ENST00000618395 HCG22E2RYF7 251 aa11.14□□□□□ -0.63
COL5A1-208ENST00000618395 RETNLBQ9BQ08 111 aa11.14□□□□□ -0.63
COL5A1-208ENST00000618395 BCE1O60756 84 aa11.13□□□□□ -0.63
COL5A1-208ENST00000618395 ZFHX2Q9C0A1 2572 aaPredicted RBP11.13□□□□□ -0.63
COL5A1-208ENST00000618395 TRBV6-4A0A1B0GX49 114 aa11.12□□□□□ -0.63
COL5A1-208ENST00000618395 C1orf137Q5JT78 98 aa11.12□□□□□ -0.63
COL5A1-208ENST00000618395 PCSK5Q92824 1860 aa11.12□□□□□ -0.63
COL5A1-208ENST00000618395 LINC00310P59036 64 aa11.12□□□□□ -0.63
COL5A1-208ENST00000618395 CD164L2Q6UWJ8 174 aa11.11□□□□□ -0.63
COL5A1-208ENST00000618395 TLN1Q9Y490 2541 aaKnown RBP11.11□□□□□ -0.63
COL5A1-208ENST00000618395 UNQ9165/PRO28630Q6UXU0 137 aa11.1□□□□□ -0.63
COL5A1-208ENST00000618395 LY6LH3BQJ8 138 aa11.1□□□□□ -0.63
COL5A1-208ENST00000618395 TNFRSF13BO14836 293 aaPredicted RBP11.1□□□□□ -0.63
COL5A1-208ENST00000618395 CNFNQ9BYD5 112 aa11.1□□□□□ -0.63
COL5A1-208ENST00000618395 IGLV2-11P01706 119 aa11.09□□□□□ -0.63
COL5A1-208ENST00000618395 ZNF295-AS1Q8N0V1 137 aa11.09□□□□□ -0.63
COL5A1-208ENST00000618395 DEFB135Q30KP9 77 aa11.09□□□□□ -0.63
COL5A1-208ENST00000618395 IGFL3Q6UXB1 125 aa11.09□□□□□ -0.63
COL5A1-208ENST00000618395 Q6ZTI0 123 aa11.08□□□□□ -0.64
COL5A1-208ENST00000618395 C4orf3Q8WVX3 66 aa11.08□□□□□ -0.64
COL5A1-208ENST00000618395 ATP11AUNQ6ZP68 121 aa11.08□□□□□ -0.64
COL5A1-208ENST00000618395 C1orf64Q8NEQ6 169 aa11.08□□□□□ -0.64
COL5A1-208ENST00000618395 Q8IZM0 81 aa11.07□□□□□ -0.64
COL5A1-208ENST00000618395 GOLGB1Q14789 3259 aaKnown RBP11.07□□□□□ -0.64
COL5A1-208ENST00000618395 THSD7BQ9C0I4 1608 aa11.06□□□□□ -0.64
COL5A1-208ENST00000618395 IGIPA6NJ69 53 aa11.06□□□□□ -0.64
COL5A1-208ENST00000618395 LOC100131303A0A0U1RQF7 123 aa11.06□□□□□ -0.64
COL5A1-208ENST00000618395 MAP6D1Q9H9H5 199 aa11.06□□□□□ -0.64
COL5A1-208ENST00000618395 SYCNQ0VAF6 134 aa11.06□□□□□ -0.64
COL5A1-208ENST00000618395 KTN1-AS1Q86SY8 53 aa11.05□□□□□ -0.64
COL5A1-208ENST00000618395 X6R8D5 127 aa11.05□□□□□ -0.64
COL5A1-208ENST00000618395 DEFB4AO15263 64 aa11.04□□□□□ -0.64
COL5A1-208ENST00000618395 POLR2KP53803 58 aaKnown RBP11.04□□□□□ -0.64
COL5A1-208ENST00000618395 A6NDX4 124 aa11.04□□□□□ -0.64
COL5A1-208ENST00000618395 PLA2G5P39877 138 aa11.04□□□□□ -0.64
COL5A1-208ENST00000618395 Q9UF83 564 aa11.04□□□□□ -0.64
COL5A1-208ENST00000618395 SPRNQ5BIV9 151 aa11.04□□□□□ -0.64
COL5A1-208ENST00000618395 IGLV9-49A0A0B4J1Y8 123 aa11.03□□□□□ -0.64
COL5A1-208ENST00000618395 ACYP2P14621 99 aa11.03□□□□□ -0.64
COL5A1-208ENST00000618395 IL17DQ8TAD2 202 aa11.03□□□□□ -0.64
COL5A1-208ENST00000618395 IGLV4-69A0A075B6H9 119 aa11.02□□□□□ -0.64
COL5A1-208ENST00000618395 EDN2P20800 178 aa11.02□□□□□ -0.64
COL5A1-208ENST00000618395 SPINK1P00995 79 aa11.02□□□□□ -0.65
COL5A1-208ENST00000618395 Q6ZSV7 163 aa11.02□□□□□ -0.65
COL5A1-208ENST00000618395 RPL37AP8A6NKH3 93 aa11.02□□□□□ -0.65
COL5A1-208ENST00000618395 IGLV1-47P01700 117 aa11.02□□□□□ -0.65
COL5A1-208ENST00000618395 CYP4F30PQ9H0H9 118 aa11.01□□□□□ -0.65
COL5A1-208ENST00000618395 FAM19A4Q96LR4 140 aa11.01□□□□□ -0.65
COL5A1-208ENST00000618395 IGHV6-1A0A0B4J1U7 121 aa11□□□□□ -0.65
COL5A1-208ENST00000618395 CCDC140Q96MF4 163 aa11□□□□□ -0.65
COL5A1-208ENST00000618395 ADAMTSL4-AS1Q5T5F5 129 aa11□□□□□ -0.65
COL5A1-208ENST00000618395 C7orf65Q6ZTY9 151 aa10.99□□□□□ -0.65
COL5A1-208ENST00000618395 ANKRD17O75179 2603 aaKnown RBP10.99□□□□□ -0.65
COL5A1-208ENST00000618395 LINC00959A0A1B0GUT2 108 aa10.98□□□□□ -0.65
COL5A1-208ENST00000618395 PROK1P58294 105 aa10.98□□□□□ -0.65
COL5A1-208ENST00000618395 URB1-AS1Q96HZ7 61 aa10.98□□□□□ -0.65
COL5A1-208ENST00000618395 Q6ZTC4 211 aa10.98□□□□□ -0.65
COL5A1-208ENST00000618395 TSPEAR-AS2P59090 65 aa10.97□□□□□ -0.65
COL5A1-208ENST00000618395 GAS8-AS1O95177 125 aa10.97□□□□□ -0.65
COL5A1-208ENST00000618395 SBSPONQ8IVN8 264 aa10.97□□□□□ -0.65
COL5A1-208ENST00000618395 SMIM29Q86T20 159 aa10.96□□□□□ -0.65
COL5A1-208ENST00000618395 LTBP2Q14767 1821 aa10.96□□□□□ -0.65
COL5A1-208ENST00000618395 BPTFQ12830 3046 aa10.96□□□□□ -0.65
COL5A1-208ENST00000618395 TP53AIP1Q9HCN2 124 aa10.96□□□□□ -0.65
COL5A1-208ENST00000618395 CDC42SE2Q9NRR3 84 aa10.96□□□□□ -0.65
COL5A1-208ENST00000618395 ABCA12Q86UK0 2595 aa10.96□□□□□ -0.66
COL5A1-208ENST00000618395 PKD1L2Q7Z442 2459 aa10.96□□□□□ -0.66
COL5A1-208ENST00000618395 K7EQG2 157 aa10.95□□□□□ -0.66
COL5A1-208ENST00000618395 J3QKU1 62 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms