RNA–Protein interactions for RNA: ENST00000617039.4

TNFRSF11A-206, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-206ENST00000617039 CMC4P56277 68 aaPredicted RBP10.65□□□□□ -0.7
TNFRSF11A-206ENST00000617039 IGHV1-58A0A0C4DH39 117 aa10.65□□□□□ -0.71
TNFRSF11A-206ENST00000617039 GAGE2EQ4V326 116 aa10.65□□□□□ -0.71
TNFRSF11A-206ENST00000617039 GAGE2DQ9UEU5 116 aa10.65□□□□□ -0.71
TNFRSF11A-206ENST00000617039 IGKV2D-24A0A075B6R9 120 aa10.64□□□□□ -0.71
TNFRSF11A-206ENST00000617039 SIGMAR1Q99720 223 aa10.64□□□□□ -0.71
TNFRSF11A-206ENST00000617039 APOC4P55056 127 aa10.64□□□□□ -0.71
TNFRSF11A-206ENST00000617039 LECT2O14960 151 aa10.64□□□□□ -0.71
TNFRSF11A-206ENST00000617039 ADAMTSL4-AS1Q5T5F5 129 aa10.63□□□□□ -0.71
TNFRSF11A-206ENST00000617039 CARD19Q96LW7 228 aa10.63□□□□□ -0.71
TNFRSF11A-206ENST00000617039 TMEM223A0PJW6 202 aa10.63□□□□□ -0.71
TNFRSF11A-206ENST00000617039 UBE2D4Q9Y2X8 147 aa10.63□□□□□ -0.71
TNFRSF11A-206ENST00000617039 TMEM86BQ8N661 226 aa10.63□□□□□ -0.71
TNFRSF11A-206ENST00000617039 DAZ2Q13117 558 aaKnown RBP10.62□□□□□ -0.71
TNFRSF11A-206ENST00000617039 DAZ4Q86SG3 579 aaKnown RBP10.62□□□□□ -0.71
TNFRSF11A-206ENST00000617039 DAZ3Q9NR90 486 aaKnown RBP10.62□□□□□ -0.71
TNFRSF11A-206ENST00000617039 IGHV4-28A0A0C4DH34 117 aa10.62□□□□□ -0.71
TNFRSF11A-206ENST00000617039 PRR3P79522 188 aaKnown RBP10.62□□□□□ -0.71
TNFRSF11A-206ENST00000617039 CR1P17927 2039 aa10.62□□□□□ -0.71
TNFRSF11A-206ENST00000617039 C9orf116Q5BN46 136 aaPredicted RBP10.62□□□□□ -0.71
TNFRSF11A-206ENST00000617039 ZMAT4Q9H898 229 aa10.62□□□□□ -0.71
TNFRSF11A-206ENST00000617039 SND1-IT1Q9HBX3 110 aa10.62□□□□□ -0.71
TNFRSF11A-206ENST00000617039 HIGD1BQ9P298 99 aa10.62□□□□□ -0.71
TNFRSF11A-206ENST00000617039 TRAV25A0A0B4J276 109 aa10.61□□□□□ -0.71
TNFRSF11A-206ENST00000617039 SNCGO76070 127 aa10.61□□□□□ -0.71
TNFRSF11A-206ENST00000617039 ZFAND6Q6FIF0 208 aa10.61□□□□□ -0.71
TNFRSF11A-206ENST00000617039 XAGE1AQ9HD64 81 aa10.61□□□□□ -0.71
TNFRSF11A-206ENST00000617039 ATXN8Q156A1 80 aa10.61□□□□□ -0.71
TNFRSF11A-206ENST00000617039 GAGE2AQ6NT46 116 aa10.61□□□□□ -0.71
TNFRSF11A-206ENST00000617039 PRSS47A8MTI9 375 aa10.61□□□□□ -0.71
TNFRSF11A-206ENST00000617039 IGLV1-51P01701 117 aa10.6□□□□□ -0.71
TNFRSF11A-206ENST00000617039 SLPIP03973 132 aa10.6□□□□□ -0.71
TNFRSF11A-206ENST00000617039 SPART-AS1P0CW21 52 aa10.6□□□□□ -0.71
TNFRSF11A-206ENST00000617039 PRO0255Q9UI72 69 aa10.6□□□□□ -0.71
TNFRSF11A-206ENST00000617039 ODF3Q96PU9 254 aa10.6□□□□□ -0.71
TNFRSF11A-206ENST00000617039 TM2D2Q9BX73 214 aa10.6□□□□□ -0.71
TNFRSF11A-206ENST00000617039 GAGE12HA6NDE8 117 aa10.59□□□□□ -0.71
TNFRSF11A-206ENST00000617039 TTC32Q5I0X7 151 aa10.59□□□□□ -0.71
TNFRSF11A-206ENST00000617039 CLUHP3Q96NS8 147 aa10.59□□□□□ -0.71
TNFRSF11A-206ENST00000617039 CHCHD7Q9BUK0 85 aa10.59□□□□□ -0.71
TNFRSF11A-206ENST00000617039 ZNF561-AS1K7EIQ3 104 aa10.59□□□□□ -0.71
TNFRSF11A-206ENST00000617039 NCR3O14931 201 aa10.59□□□□□ -0.71
TNFRSF11A-206ENST00000617039 ANKRD29Q8N6D5 301 aa10.59□□□□□ -0.71
TNFRSF11A-206ENST00000617039 TEX49A0A1B0GTD5 131 aa10.58□□□□□ -0.72
TNFRSF11A-206ENST00000617039 IGHV4-30-4P0DP06 118 aa10.58□□□□□ -0.72
TNFRSF11A-206ENST00000617039 COX7B2Q8TF08 81 aa10.58□□□□□ -0.72
TNFRSF11A-206ENST00000617039 TRBV6-5A0A0K0K1A5 114 aa10.58□□□□□ -0.72
TNFRSF11A-206ENST00000617039 TAL2Q16559 108 aa10.58□□□□□ -0.72
TNFRSF11A-206ENST00000617039 LINC00242Q5T6M2 205 aa10.58□□□□□ -0.72
TNFRSF11A-206ENST00000617039 TRBV6-8A0A0A6YYG3 113 aa10.57□□□□□ -0.72
TNFRSF11A-206ENST00000617039 TRAV8-4A0A0B4J246 113 aa10.57□□□□□ -0.72
TNFRSF11A-206ENST00000617039 F8W1H4 67 aa10.57□□□□□ -0.72
TNFRSF11A-206ENST00000617039 KRTAP1-3Q8IUG1 177 aa10.57□□□□□ -0.72
TNFRSF11A-206ENST00000617039 TRBV20-1A0A075B6N2 111 aa10.57□□□□□ -0.72
TNFRSF11A-206ENST00000617039 C11orf72Q8NBR9 251 aa10.57□□□□□ -0.72
TNFRSF11A-206ENST00000617039 FAM19A4Q96LR4 140 aa10.57□□□□□ -0.72
TNFRSF11A-206ENST00000617039 DNAJC30Q96LL9 226 aa10.57□□□□□ -0.72
TNFRSF11A-206ENST00000617039 NTM-AS1Q6ZSK4 140 aa10.56□□□□□ -0.72
TNFRSF11A-206ENST00000617039 ICOSQ9Y6W8 199 aa10.56□□□□□ -0.72
TNFRSF11A-206ENST00000617039 STAB2Q8WWQ8 2551 aa10.56□□□□□ -0.72
TNFRSF11A-206ENST00000617039 TRIAP1O43715 76 aa10.55□□□□□ -0.72
TNFRSF11A-206ENST00000617039 RNF152Q8N8N0 203 aa10.55□□□□□ -0.72
TNFRSF11A-206ENST00000617039 LAMTOR3Q9UHA4 124 aa10.55□□□□□ -0.72
TNFRSF11A-206ENST00000617039 TRBV10-1A0A0K0K1A3 114 aa10.54□□□□□ -0.72
TNFRSF11A-206ENST00000617039 UBE2DNLQ8IWF7 75 aa10.53□□□□□ -0.72
TNFRSF11A-206ENST00000617039 EIF4EBP3O60516 100 aaPredicted RBP10.53□□□□□ -0.72
TNFRSF11A-206ENST00000617039 LINC01620Q4KN68 170 aa10.53□□□□□ -0.72
TNFRSF11A-206ENST00000617039 COX7A2LO14548 114 aa10.53□□□□□ -0.72
TNFRSF11A-206ENST00000617039 SCGB1A1P11684 91 aa10.53□□□□□ -0.72
TNFRSF11A-206ENST00000617039 NANOS2P60321 138 aaKnown RBP10.53□□□□□ -0.72
TNFRSF11A-206ENST00000617039 CELA1Q9UNI1 258 aa10.53□□□□□ -0.72
TNFRSF11A-206ENST00000617039 REG3AQ06141 175 aa10.52□□□□□ -0.72
TNFRSF11A-206ENST00000617039 MRPL23Q16540 153 aaKnown RBP10.52□□□□□ -0.72
TNFRSF11A-206ENST00000617039 DEFB105AQ8NG35 78 aa10.52□□□□□ -0.72
TNFRSF11A-206ENST00000617039 FSHBP01225 129 aa10.52□□□□□ -0.73
TNFRSF11A-206ENST00000617039 UBE2D1P51668 147 aa10.52□□□□□ -0.73
TNFRSF11A-206ENST00000617039 UBE2D3P61077 147 aa10.51□□□□□ -0.73
TNFRSF11A-206ENST00000617039 UBE2D2P62837 147 aa10.51□□□□□ -0.73
TNFRSF11A-206ENST00000617039 CDC42SE2Q9NRR3 84 aa10.51□□□□□ -0.73
TNFRSF11A-206ENST00000617039 PSCAO43653 123 aa10.51□□□□□ -0.73
TNFRSF11A-206ENST00000617039 KRTAP10-3P60369 221 aa10.51□□□□□ -0.73
TNFRSF11A-206ENST00000617039 CHCHD10Q8WYQ3 142 aaPredicted RBP10.51□□□□□ -0.73
TNFRSF11A-206ENST00000617039 HIST1H4AP62805 103 aaKnown RBP10.51□□□□□ -0.73
TNFRSF11A-206ENST00000617039 BAALC-AS2P0C853 105 aa10.5□□□□□ -0.73
TNFRSF11A-206ENST00000617039 LINC00308Q8TCZ7 52 aa10.5□□□□□ -0.73
TNFRSF11A-206ENST00000617039 FHL2Q14192 279 aa10.5□□□□□ -0.73
TNFRSF11A-206ENST00000617039 COPS9Q8WXC6 57 aa10.5□□□□□ -0.73
TNFRSF11A-206ENST00000617039 RPL18AQ02543 176 aaKnown RBP10.5□□□□□ -0.73
TNFRSF11A-206ENST00000617039 MIAQ16674 131 aa10.5□□□□□ -0.73
TNFRSF11A-206ENST00000617039 C15orf53Q8NAA6 179 aa10.5□□□□□ -0.73
TNFRSF11A-206ENST00000617039 PPDPFLQ8WWR9 84 aa10.5□□□□□ -0.73
TNFRSF11A-206ENST00000617039 A8MTW9 85 aa10.49□□□□□ -0.73
TNFRSF11A-206ENST00000617039 SPAG11BQ08648 103 aa10.49□□□□□ -0.73
TNFRSF11A-206ENST00000617039 GAGE2BQ13066 116 aa10.49□□□□□ -0.73
TNFRSF11A-206ENST00000617039 FOXI1Q12951 378 aa10.48□□□□□ -0.73
TNFRSF11A-206ENST00000617039 C6orf223Q8N319 242 aa10.48□□□□□ -0.73
TNFRSF11A-206ENST00000617039 CAMK2N2Q96S95 79 aa10.48□□□□□ -0.73
TNFRSF11A-206ENST00000617039 MRPS36P82909 103 aaKnown RBP10.48□□□□□ -0.73
TNFRSF11A-206ENST00000617039 Q6ZTC4 211 aa10.48□□□□□ -0.73
TNFRSF11A-206ENST00000617039 ANAPC13Q9BS18 74 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 267.7 ms