RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 MRGPRG-AS1Q2M3A8 158 aa13.62□□□□□ -0.23
GABPB1-212ENST00000615671 CRIP2P52943 208 aaPredicted RBP13.62□□□□□ -0.23
GABPB1-212ENST00000615671 LINC01556Q5JQF7 62 aa13.62□□□□□ -0.23
GABPB1-212ENST00000615671 Q6ZTC4 211 aa13.61□□□□□ -0.23
GABPB1-212ENST00000615671 LINC00474Q9P2X8 69 aa13.61□□□□□ -0.23
GABPB1-212ENST00000615671 WNK1Q9H4A3 2382 aa13.61□□□□□ -0.23
GABPB1-212ENST00000615671 ZNF73O43830 326 aaPredicted RBP13.61□□□□□ -0.23
GABPB1-212ENST00000615671 ESRGQ1W209 222 aa13.61□□□□□ -0.23
GABPB1-212ENST00000615671 MRPS12O15235 138 aaKnown RBP13.61□□□□□ -0.23
GABPB1-212ENST00000615671 PRR14LQ5THK1 2151 aa13.6□□□□□ -0.23
GABPB1-212ENST00000615671 IGLV1-40P01703 118 aa13.6□□□□□ -0.23
GABPB1-212ENST00000615671 C1orf137Q5JT78 98 aa13.6□□□□□ -0.23
GABPB1-212ENST00000615671 UNQ6190/PRO20217Q6UXQ8 127 aa13.59□□□□□ -0.23
GABPB1-212ENST00000615671 CELA1Q9UNI1 258 aa13.59□□□□□ -0.23
GABPB1-212ENST00000615671 Q8N9L7 120 aa13.59□□□□□ -0.23
GABPB1-212ENST00000615671 Q8N6K4 173 aa13.59□□□□□ -0.23
GABPB1-212ENST00000615671 PRR3P79522 188 aaKnown RBP13.58□□□□□ -0.24
GABPB1-212ENST00000615671 PRO3102Q9H379 93 aa13.58□□□□□ -0.24
GABPB1-212ENST00000615671 IGHV6-1A0A0B4J1U7 121 aa13.58□□□□□ -0.24
GABPB1-212ENST00000615671 NRACQ8N912 160 aa13.58□□□□□ -0.24
GABPB1-212ENST00000615671 PCNX3Q9H6A9 2034 aa13.58□□□□□ -0.24
GABPB1-212ENST00000615671 TRBV27A0A0K0K1C4 114 aa13.57□□□□□ -0.24
GABPB1-212ENST00000615671 U3KQK5 164 aa13.56□□□□□ -0.24
GABPB1-212ENST00000615671 REG3GQ6UW15 175 aa13.56□□□□□ -0.24
GABPB1-212ENST00000615671 RPL28P46779 137 aaKnown RBP13.55□□□□□ -0.24
GABPB1-212ENST00000615671 TRBV30A0A0K0K1B3 111 aa13.55□□□□□ -0.24
GABPB1-212ENST00000615671 FSTL3O95633 263 aa13.54□□□□□ -0.24
GABPB1-212ENST00000615671 SPINK1P00995 79 aa13.54□□□□□ -0.24
GABPB1-212ENST00000615671 A6NED7 52 aa13.54□□□□□ -0.24
GABPB1-212ENST00000615671 RAI1Q7Z5J4 1906 aaPredicted RBP13.53□□□□□ -0.24
GABPB1-212ENST00000615671 KLLNB2CW77 178 aa13.53□□□□□ -0.24
GABPB1-212ENST00000615671 PYGO1Q9Y3Y4 419 aa13.53□□□□□ -0.24
GABPB1-212ENST00000615671 DEFB116Q30KQ4 102 aa13.53□□□□□ -0.24
GABPB1-212ENST00000615671 NDUFC2-KCTD14E9PQ53 114 aa13.53□□□□□ -0.24
GABPB1-212ENST00000615671 COX6A2Q02221 97 aa13.52□□□□□ -0.24
GABPB1-212ENST00000615671 CDC42SE2Q9NRR3 84 aa13.52□□□□□ -0.24
GABPB1-212ENST00000615671 ODF3L2Q3SX64 289 aa13.52□□□□□ -0.24
GABPB1-212ENST00000615671 C1orf134Q5TEV5 83 aa13.52□□□□□ -0.24
GABPB1-212ENST00000615671 FSHBP01225 129 aa13.5□□□□□ -0.25
GABPB1-212ENST00000615671 FAM19A3Q7Z5A8 133 aa13.5□□□□□ -0.25
GABPB1-212ENST00000615671 IGLV4-60A0A075B6I1 120 aa13.5□□□□□ -0.25
GABPB1-212ENST00000615671 EXPH5Q8NEV8 1989 aa13.49□□□□□ -0.25
GABPB1-212ENST00000615671 PTPN13Q12923 2485 aa13.49□□□□□ -0.25
GABPB1-212ENST00000615671 ATP5EP2Q5VTU8 51 aa13.49□□□□□ -0.25
GABPB1-212ENST00000615671 UQCRQO14949 82 aa13.49□□□□□ -0.25
GABPB1-212ENST00000615671 COX17Q14061 63 aa13.49□□□□□ -0.25
GABPB1-212ENST00000615671 TRBV10-3A0A0K0K1G6 114 aa13.48□□□□□ -0.25
GABPB1-212ENST00000615671 Q8IZM0 81 aa13.48□□□□□ -0.25
GABPB1-212ENST00000615671 BDP1A6H8Y1 2624 aa13.48□□□□□ -0.25
GABPB1-212ENST00000615671 SORL1Q92673 2214 aa13.47□□□□□ -0.25
GABPB1-212ENST00000615671 FAM240AA0A1B0GVK7 77 aa13.47□□□□□ -0.25
GABPB1-212ENST00000615671 PRRC2AP48634 2157 aaKnown RBP13.47□□□□□ -0.25
GABPB1-212ENST00000615671 ARHGAP32A7KAX9 2087 aa13.46□□□□□ -0.25
GABPB1-212ENST00000615671 SERP2Q8N6R1 65 aa13.46□□□□□ -0.25
GABPB1-212ENST00000615671 LINC00694P0DN24 101 aa13.46□□□□□ -0.25
GABPB1-212ENST00000615671 MRPS36P82909 103 aaKnown RBP13.45□□□□□ -0.26
GABPB1-212ENST00000615671 LST1O00453 97 aa13.45□□□□□ -0.26
GABPB1-212ENST00000615671 PCOTHQ58A44 107 aa13.44□□□□□ -0.26
GABPB1-212ENST00000615671 PRYO14603 147 aa13.44□□□□□ -0.26
GABPB1-212ENST00000615671 Q9BRP9 147 aa13.43□□□□□ -0.26
GABPB1-212ENST00000615671 CSPG4Q6UVK1 2322 aa13.43□□□□□ -0.26
GABPB1-212ENST00000615671 TIMM17BO60830 172 aa13.42□□□□□ -0.26
GABPB1-212ENST00000615671 FHL2Q14192 279 aa13.42□□□□□ -0.26
GABPB1-212ENST00000615671 IGLV1-51P01701 117 aa13.42□□□□□ -0.26
GABPB1-212ENST00000615671 POLR2KP53803 58 aaKnown RBP13.42□□□□□ -0.26
GABPB1-212ENST00000615671 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.42□□□□□ -0.26
GABPB1-212ENST00000615671 MRPL55Q7Z7F7 128 aaKnown RBP13.42□□□□□ -0.26
GABPB1-212ENST00000615671 A0A087WYN8 130 aa13.4□□□□□ -0.26
GABPB1-212ENST00000615671 LINC00242Q5T6M2 205 aa13.4□□□□□ -0.26
GABPB1-212ENST00000615671 SBSPONQ8IVN8 264 aa13.4□□□□□ -0.26
GABPB1-212ENST00000615671 HIVEP3Q5T1R4 2406 aa13.4□□□□□ -0.26
GABPB1-212ENST00000615671 LINC00208Q96KT6 92 aa13.39□□□□□ -0.27
GABPB1-212ENST00000615671 Q6Q795 121 aa13.39□□□□□ -0.27
GABPB1-212ENST00000615671 HCFC1P51610 2035 aa13.39□□□□□ -0.27
GABPB1-212ENST00000615671 SPG11Q96JI7 2443 aa13.38□□□□□ -0.27
GABPB1-212ENST00000615671 CHCHD7Q9BUK0 85 aa13.38□□□□□ -0.27
GABPB1-212ENST00000615671 Q6ZSN1 163 aa13.37□□□□□ -0.27
GABPB1-212ENST00000615671 COL5A1P20908 1838 aaPredicted RBP13.37□□□□□ -0.27
GABPB1-212ENST00000615671 CUL9Q8IWT3 2517 aa13.37□□□□□ -0.27
GABPB1-212ENST00000615671 A0A1W2PPR1 153 aa13.37□□□□□ -0.27
GABPB1-212ENST00000615671 LINC01547P58512 204 aaPredicted RBP13.37□□□□□ -0.27
GABPB1-212ENST00000615671 PRLHP81277 87 aa13.37□□□□□ -0.27
GABPB1-212ENST00000615671 NOTCH2Q04721 2471 aa13.37□□□□□ -0.27
GABPB1-212ENST00000615671 A8MTW9 85 aa13.37□□□□□ -0.27
GABPB1-212ENST00000615671 EGFEM1PQ0D2K5 195 aa13.37□□□□□ -0.27
GABPB1-212ENST00000615671 TRBV7-6A0A0J9YX20 115 aa13.36□□□□□ -0.27
GABPB1-212ENST00000615671 ZNF580Q9UK33 172 aa13.36□□□□□ -0.27
GABPB1-212ENST00000615671 SONP18583 2426 aaKnown RBP13.35□□□□□ -0.27
GABPB1-212ENST00000615671 XGP55808 180 aa13.35□□□□□ -0.27
GABPB1-212ENST00000615671 Q8N814 137 aa13.35□□□□□ -0.27
GABPB1-212ENST00000615671 C2orf48Q96LS8 159 aa13.35□□□□□ -0.27
GABPB1-212ENST00000615671 NTM-AS1Q6ZSK4 140 aa13.35□□□□□ -0.27
GABPB1-212ENST00000615671 C2orf91Q6ZV80 131 aa13.35□□□□□ -0.27
GABPB1-212ENST00000615671 LYPD5Q6UWN5 251 aa13.34□□□□□ -0.27
GABPB1-212ENST00000615671 SMIM1B2RUZ4 78 aa13.34□□□□□ -0.27
GABPB1-212ENST00000615671 V9GYY9 64 aa13.33□□□□□ -0.28
GABPB1-212ENST00000615671 PLXNB1O43157 2135 aa13.33□□□□□ -0.28
GABPB1-212ENST00000615671 CCDC179H3BU77 68 aa13.32□□□□□ -0.28
GABPB1-212ENST00000615671 C16orf95Q9H693 158 aa13.32□□□□□ -0.28
GABPB1-212ENST00000615671 IGIPA6NJ69 53 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms