RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 IGIPA6NJ69 53 aa12.72□□□□□ -0.37
HMGXB3-206ENST00000613459 CRIP2P52943 208 aaPredicted RBP12.72□□□□□ -0.37
HMGXB3-206ENST00000613459 PCNX3Q9H6A9 2034 aa12.72□□□□□ -0.37
HMGXB3-206ENST00000613459 IGKV2-28A0A075B6P5 120 aa12.72□□□□□ -0.37
HMGXB3-206ENST00000613459 IGKV2D-28P01615 120 aa12.72□□□□□ -0.37
HMGXB3-206ENST00000613459 PRO3102Q9H379 93 aa12.72□□□□□ -0.37
HMGXB3-206ENST00000613459 FAM30AQ9NZY2 134 aa12.71□□□□□ -0.37
HMGXB3-206ENST00000613459 A0A0J9YWU9 116 aa12.71□□□□□ -0.38
HMGXB3-206ENST00000613459 BRI3O95415 125 aa12.71□□□□□ -0.38
HMGXB3-206ENST00000613459 F8WDY8 70 aa12.7□□□□□ -0.38
HMGXB3-206ENST00000613459 C10orf99Q6UWK7 81 aa12.7□□□□□ -0.38
HMGXB3-206ENST00000613459 ZNF580Q9UK33 172 aa12.7□□□□□ -0.38
HMGXB3-206ENST00000613459 LINC00526Q96FQ7 95 aa12.69□□□□□ -0.38
HMGXB3-206ENST00000613459 EGFEM1PQ0D2K5 195 aa12.69□□□□□ -0.38
HMGXB3-206ENST00000613459 POM121L12Q8N7R1 296 aa12.68□□□□□ -0.38
HMGXB3-206ENST00000613459 CUL9Q8IWT3 2517 aa12.68□□□□□ -0.38
HMGXB3-206ENST00000613459 HIVEP2P31629 2446 aa12.67□□□□□ -0.38
HMGXB3-206ENST00000613459 COX8CQ7Z4L0 72 aa12.67□□□□□ -0.38
HMGXB3-206ENST00000613459 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.67□□□□□ -0.38
HMGXB3-206ENST00000613459 NTM-AS1Q6ZSK4 140 aa12.66□□□□□ -0.38
HMGXB3-206ENST00000613459 LY6G6DO95868 133 aa12.66□□□□□ -0.38
HMGXB3-206ENST00000613459 RPL28P46779 137 aaKnown RBP12.66□□□□□ -0.38
HMGXB3-206ENST00000613459 NOTCH2Q04721 2471 aa12.66□□□□□ -0.38
HMGXB3-206ENST00000613459 ZNF843Q8N446 348 aa12.66□□□□□ -0.38
HMGXB3-206ENST00000613459 LRCOL1A6NCL2 159 aa12.65□□□□□ -0.38
HMGXB3-206ENST00000613459 CSPG4Q6UVK1 2322 aa12.65□□□□□ -0.38
HMGXB3-206ENST00000613459 CSDC2Q9Y534 153 aaKnown RBP12.64□□□□□ -0.39
HMGXB3-206ENST00000613459 LOC100131303A0A0U1RQF7 123 aa12.64□□□□□ -0.39
HMGXB3-206ENST00000613459 LINC00242Q5T6M2 205 aa12.64□□□□□ -0.39
HMGXB3-206ENST00000613459 GAS8-AS1O95177 125 aa12.64□□□□□ -0.39
HMGXB3-206ENST00000613459 PRR4Q16378 134 aa12.64□□□□□ -0.39
HMGXB3-206ENST00000613459 PLAC8L1A1L4L8 177 aa12.64□□□□□ -0.39
HMGXB3-206ENST00000613459 Q8N814 137 aa12.63□□□□□ -0.39
HMGXB3-206ENST00000613459 CYSRT1A8MQ03 144 aa12.63□□□□□ -0.39
HMGXB3-206ENST00000613459 PPDPFQ9H3Y8 114 aa12.63□□□□□ -0.39
HMGXB3-206ENST00000613459 HRCT1Q6UXD1 115 aa12.62□□□□□ -0.39
HMGXB3-206ENST00000613459 WFDC10AQ9H1F0 79 aa12.62□□□□□ -0.39
HMGXB3-206ENST00000613459 MUC22E2RYF6 1773 aaPredicted RBP12.62□□□□□ -0.39
HMGXB3-206ENST00000613459 PRR14LQ5THK1 2151 aa12.62□□□□□ -0.39
HMGXB3-206ENST00000613459 C10orf25Q5T742 122 aa12.62□□□□□ -0.39
HMGXB3-206ENST00000613459 C10orf142B7Z368 130 aa12.61□□□□□ -0.39
HMGXB3-206ENST00000613459 SMIM1B2RUZ4 78 aa12.61□□□□□ -0.39
HMGXB3-206ENST00000613459 WNK1Q9H4A3 2382 aa12.61□□□□□ -0.39
HMGXB3-206ENST00000613459 LINC01561Q8N1V8 128 aa12.61□□□□□ -0.39
HMGXB3-206ENST00000613459 PRYO14603 147 aa12.6□□□□□ -0.39
HMGXB3-206ENST00000613459 SPINK6Q6UWN8 80 aa12.6□□□□□ -0.39
HMGXB3-206ENST00000613459 DSCAML1Q8TD84 2053 aa12.59□□□□□ -0.39
HMGXB3-206ENST00000613459 RPL37AP8A6NKH3 93 aa12.59□□□□□ -0.39
HMGXB3-206ENST00000613459 OTOGLQ3ZCN5 2332 aa12.59□□□□□ -0.39
HMGXB3-206ENST00000613459 AMELXQ99217 191 aa12.57□□□□□ -0.4
HMGXB3-206ENST00000613459 C18orf65Q6ZTR6 163 aa12.57□□□□□ -0.4
HMGXB3-206ENST00000613459 ODF3L2Q3SX64 289 aa12.57□□□□□ -0.4
HMGXB3-206ENST00000613459 CACNA1AO00555 2505 aa12.57□□□□□ -0.4
HMGXB3-206ENST00000613459 KIAA1549Q9HCM3 1950 aa12.56□□□□□ -0.4
HMGXB3-206ENST00000613459 CELA1Q9UNI1 258 aa12.55□□□□□ -0.4
HMGXB3-206ENST00000613459 DSCAMO60469 2012 aa12.55□□□□□ -0.4
HMGXB3-206ENST00000613459 A0A087WYN8 130 aa12.55□□□□□ -0.4
HMGXB3-206ENST00000613459 IGLV1-51P01701 117 aa12.55□□□□□ -0.4
HMGXB3-206ENST00000613459 IGLV9-49A0A0B4J1Y8 123 aa12.54□□□□□ -0.4
HMGXB3-206ENST00000613459 NUPR2A6NF83 97 aa12.54□□□□□ -0.4
HMGXB3-206ENST00000613459 BEAN1Q3B7T3 259 aa12.54□□□□□ -0.4
HMGXB3-206ENST00000613459 C1orf137Q5JT78 98 aa12.54□□□□□ -0.4
HMGXB3-206ENST00000613459 IGHV4-30-4P0DP06 118 aa12.53□□□□□ -0.4
HMGXB3-206ENST00000613459 PMAIP1Q13794 54 aa12.53□□□□□ -0.4
HMGXB3-206ENST00000613459 CDIP1Q9H305 208 aa12.53□□□□□ -0.4
HMGXB3-206ENST00000613459 REG3GQ6UW15 175 aa12.53□□□□□ -0.4
HMGXB3-206ENST00000613459 ATRXP46100 2492 aa12.52□□□□□ -0.4
HMGXB3-206ENST00000613459 C16orf95Q9H693 158 aa12.52□□□□□ -0.4
HMGXB3-206ENST00000613459 A0A087WVE0 104 aa12.52□□□□□ -0.4
HMGXB3-206ENST00000613459 TSPEAR-AS2P59090 65 aa12.52□□□□□ -0.4
HMGXB3-206ENST00000613459 UNQ6190/PRO20217Q6UXQ8 127 aa12.52□□□□□ -0.41
HMGXB3-206ENST00000613459 LINC00208Q96KT6 92 aa12.51□□□□□ -0.41
HMGXB3-206ENST00000613459 C2orf48Q96LS8 159 aa12.51□□□□□ -0.41
HMGXB3-206ENST00000613459 TRBV10-3A0A0K0K1G6 114 aa12.51□□□□□ -0.41
HMGXB3-206ENST00000613459 ESRGQ1W209 222 aa12.51□□□□□ -0.41
HMGXB3-206ENST00000613459 ATG2AQ2TAZ0 1938 aa12.51□□□□□ -0.41
HMGXB3-206ENST00000613459 PTPN13Q12923 2485 aa12.51□□□□□ -0.41
HMGXB3-206ENST00000613459 IGLV2-18A0A075B6J9 118 aa12.51□□□□□ -0.41
HMGXB3-206ENST00000613459 A0A096LNJ9 63 aa12.51□□□□□ -0.41
HMGXB3-206ENST00000613459 SOSTDC1Q6X4U4 206 aa12.51□□□□□ -0.41
HMGXB3-206ENST00000613459 A0A1B0GUV1 79 aa12.5□□□□□ -0.41
HMGXB3-206ENST00000613459 PLXNB1O43157 2135 aa12.5□□□□□ -0.41
HMGXB3-206ENST00000613459 CEP192Q8TEP8 1941 aa12.5□□□□□ -0.41
HMGXB3-206ENST00000613459 COX6A2Q02221 97 aa12.5□□□□□ -0.41
HMGXB3-206ENST00000613459 NANOS2P60321 138 aaKnown RBP12.49□□□□□ -0.41
HMGXB3-206ENST00000613459 SONP18583 2426 aaKnown RBP12.49□□□□□ -0.41
HMGXB3-206ENST00000613459 TRBV7-7A0A0K0K1E9 115 aa12.48□□□□□ -0.41
HMGXB3-206ENST00000613459 FHL2Q14192 279 aa12.48□□□□□ -0.41
HMGXB3-206ENST00000613459 Q6ZVQ6 151 aa12.47□□□□□ -0.41
HMGXB3-206ENST00000613459 Q8N3U1 123 aa12.47□□□□□ -0.41
HMGXB3-206ENST00000613459 PRM2P04554 102 aa12.47□□□□□ -0.41
HMGXB3-206ENST00000613459 ADAMTSL4-AS1Q5T5F5 129 aa12.47□□□□□ -0.41
HMGXB3-206ENST00000613459 HCFC1P51610 2035 aa12.46□□□□□ -0.42
HMGXB3-206ENST00000613459 TRBV7-6A0A0J9YX20 115 aa12.46□□□□□ -0.42
HMGXB3-206ENST00000613459 SORL1Q92673 2214 aa12.44□□□□□ -0.42
HMGXB3-206ENST00000613459 AVPP01185 164 aa12.44□□□□□ -0.42
HMGXB3-206ENST00000613459 TANC2Q9HCD6 1990 aa12.44□□□□□ -0.42
HMGXB3-206ENST00000613459 M0R2N4 97 aa12.43□□□□□ -0.42
HMGXB3-206ENST00000613459 NAV3Q8IVL0 2385 aa12.43□□□□□ -0.42
HMGXB3-206ENST00000613459 IGLV4-60A0A075B6I1 120 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 154.2 ms