RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 TIMM21Q9BVV7 248 aa13.9□□□□□ -0.18
MMP28-203ENST00000612672 TAGLN2P37802 199 aaKnown RBP13.89□□□□□ -0.19
MMP28-203ENST00000612672 LCE2DQ5TA82 110 aaPredicted RBP13.89□□□□□ -0.19
MMP28-203ENST00000612672 TMEM250H0YL14 139 aa13.87□□□□□ -0.19
MMP28-203ENST00000612672 TSPAN13O95857 204 aa13.87□□□□□ -0.19
MMP28-203ENST00000612672 RPL13AP40429 203 aaKnown RBP13.87□□□□□ -0.19
MMP28-203ENST00000612672 UBE2BP63146 152 aa13.87□□□□□ -0.19
MMP28-203ENST00000612672 KIAA0087Q14695 138 aa13.87□□□□□ -0.19
MMP28-203ENST00000612672 C9orf129Q5T035 196 aaKnown RBP13.87□□□□□ -0.19
MMP28-203ENST00000612672 SLC51BQ86UW2 128 aa13.87□□□□□ -0.19
MMP28-203ENST00000612672 KIR2DL4Q99706 377 aa13.86□□□□□ -0.19
MMP28-203ENST00000612672 F8WDY8 70 aa13.85□□□□□ -0.19
MMP28-203ENST00000612672 CEBPGP53567 150 aa13.85□□□□□ -0.19
MMP28-203ENST00000612672 SMAGPQ0VAQ4 97 aa13.85□□□□□ -0.19
MMP28-203ENST00000612672 LINC01551Q86U37 167 aa13.85□□□□□ -0.19
MMP28-203ENST00000612672 MRPL51Q4U2R6 128 aaKnown RBP13.84□□□□□ -0.19
MMP28-203ENST00000612672 CARHSP1Q9Y2V2 147 aaKnown RBP13.83□□□□□ -0.2
MMP28-203ENST00000612672 TMEM241Q24JQ0 296 aa13.82□□□□□ -0.2
MMP28-203ENST00000612672 C2orf82Q6UX34 121 aa13.82□□□□□ -0.2
MMP28-203ENST00000612672 A0A087X002 238 aa13.81□□□□□ -0.2
MMP28-203ENST00000612672 V9GYV3 84 aa13.81□□□□□ -0.2
MMP28-203ENST00000612672 OSTCQ9NRP0 149 aa13.8□□□□□ -0.2
MMP28-203ENST00000612672 IFITM10A6NMD0 228 aa13.79□□□□□ -0.2
MMP28-203ENST00000612672 PPP1R2P9O14990 202 aa13.79□□□□□ -0.2
MMP28-203ENST00000612672 ZNF861PO60384 105 aa13.79□□□□□ -0.2
MMP28-203ENST00000612672 FAM104BQ5XKR9 115 aa13.79□□□□□ -0.2
MMP28-203ENST00000612672 TMEM18Q96B42 140 aa13.79□□□□□ -0.2
MMP28-203ENST00000612672 SMIM7Q9BQ49 75 aa13.79□□□□□ -0.2
MMP28-203ENST00000612672 PPP1R17O96001 155 aa13.78□□□□□ -0.2
MMP28-203ENST00000612672 MRPS36P82909 103 aaKnown RBP13.78□□□□□ -0.2
MMP28-203ENST00000612672 RIGQ13278 110 aa13.78□□□□□ -0.2
MMP28-203ENST00000612672 ALKAL2Q6UX46 152 aa13.78□□□□□ -0.2
MMP28-203ENST00000612672 SPANXA1Q9NS26 97 aa13.77□□□□□ -0.21
MMP28-203ENST00000612672 TRBV24-1A0A075B6N3 115 aa13.76□□□□□ -0.21
MMP28-203ENST00000612672 NDUFC2-KCTD14E9PQ53 114 aa13.76□□□□□ -0.21
MMP28-203ENST00000612672 RPL32P62910 135 aaKnown RBP13.76□□□□□ -0.21
MMP28-203ENST00000612672 HBBP68871 147 aa13.76□□□□□ -0.21
MMP28-203ENST00000612672 C20orf78Q9BR46 151 aa13.75□□□□□ -0.21
MMP28-203ENST00000612672 SMIM2Q9BVW6 85 aa13.75□□□□□ -0.21
MMP28-203ENST00000612672 TRBV30A0A0K0K1B3 111 aa13.74□□□□□ -0.21
MMP28-203ENST00000612672 TCAPO15273 167 aa13.74□□□□□ -0.21
MMP28-203ENST00000612672 LINC00242Q5T6M2 205 aa13.74□□□□□ -0.21
MMP28-203ENST00000612672 TNFRSF6BO95407 300 aa13.73□□□□□ -0.21
MMP28-203ENST00000612672 TGIF2-C20orf24A0A0A6YYL0 155 aa13.72□□□□□ -0.21
MMP28-203ENST00000612672 LINC00469Q8N7U9 141 aa13.72□□□□□ -0.21
MMP28-203ENST00000612672 NPYP01303 97 aa13.71□□□□□ -0.21
MMP28-203ENST00000612672 RETNLBQ9BQ08 111 aa13.71□□□□□ -0.21
MMP28-203ENST00000612672 CTDSP1Q9GZU7 261 aa13.71□□□□□ -0.21
MMP28-203ENST00000612672 C22orf24Q9Y442 160 aa13.71□□□□□ -0.21
MMP28-203ENST00000612672 ZNF727A8MUV8 499 aa13.7□□□□□ -0.22
MMP28-203ENST00000612672 CKS2P33552 79 aa13.7□□□□□ -0.22
MMP28-203ENST00000612672 IGLV4-3A0A075B6K6 122 aa13.69□□□□□ -0.22
MMP28-203ENST00000612672 LINC00862A6NCI5 91 aa13.69□□□□□ -0.22
MMP28-203ENST00000612672 D6R8Y8 96 aa13.69□□□□□ -0.22
MMP28-203ENST00000612672 SRP19P09132 144 aaKnown RBP13.69□□□□□ -0.22
MMP28-203ENST00000612672 ANAPC11Q9NYG5 84 aa13.69□□□□□ -0.22
MMP28-203ENST00000612672 NAT8BQ9UHF3 227 aa13.69□□□□□ -0.22
MMP28-203ENST00000612672 BLOC1S1P78537 153 aa13.68□□□□□ -0.22
MMP28-203ENST00000612672 FAM74A3Q4VXF1 159 aa13.68□□□□□ -0.22
MMP28-203ENST00000612672 NUPR1O60356 82 aa13.67□□□□□ -0.22
MMP28-203ENST00000612672 KRTAP13-2Q52LG2 175 aa13.67□□□□□ -0.22
MMP28-203ENST00000612672 ZC2HC1BQ5TFG8 222 aa13.67□□□□□ -0.22
MMP28-203ENST00000612672 PACRGQ96M98 296 aaPredicted RBP13.67□□□□□ -0.22
MMP28-203ENST00000612672 XAGE1AQ9HD64 81 aa13.67□□□□□ -0.22
MMP28-203ENST00000612672 TYMSOSQ8TAI1 123 aa13.66□□□□□ -0.22
MMP28-203ENST00000612672 EIF5A2Q9GZV4 153 aaKnown RBP13.66□□□□□ -0.22
MMP28-203ENST00000612672 SMIM27A0A1W2PRY6 76 aa13.65□□□□□ -0.22
MMP28-203ENST00000612672 RPL23P62829 140 aaKnown RBP13.65□□□□□ -0.22
MMP28-203ENST00000612672 LINC00173Q6ZV60 143 aa13.63□□□□□ -0.23
MMP28-203ENST00000612672 CRYGAP11844 174 aa13.62□□□□□ -0.23
MMP28-203ENST00000612672 IFI27P40305 119 aaPredicted RBP13.62□□□□□ -0.23
MMP28-203ENST00000612672 PYGO1Q9Y3Y4 419 aa13.62□□□□□ -0.23
MMP28-203ENST00000612672 BCE1O60756 84 aa13.61□□□□□ -0.23
MMP28-203ENST00000612672 MRPL54Q6P161 138 aaKnown RBP13.61□□□□□ -0.23
MMP28-203ENST00000612672 A0A1B0GXF2 115 aa13.6□□□□□ -0.23
MMP28-203ENST00000612672 TMEM141Q96I45 108 aa13.6□□□□□ -0.23
MMP28-203ENST00000612672 LINC01561Q8N1V8 128 aa13.59□□□□□ -0.23
MMP28-203ENST00000612672 TOMM7Q9P0U1 55 aa13.59□□□□□ -0.23
MMP28-203ENST00000612672 RPL28P46779 137 aaKnown RBP13.58□□□□□ -0.24
MMP28-203ENST00000612672 ADIRFQ15847 76 aa13.58□□□□□ -0.24
MMP28-203ENST00000612672 MRPL55Q7Z7F7 128 aaKnown RBP13.58□□□□□ -0.24
MMP28-203ENST00000612672 C9JQL5 133 aa13.57□□□□□ -0.24
MMP28-203ENST00000612672 LBHQ53QV2 105 aaPredicted RBP13.57□□□□□ -0.24
MMP28-203ENST00000612672 A0A1B0GW15 77 aa13.56□□□□□ -0.24
MMP28-203ENST00000612672 TPRXLQ17RH7 258 aa13.56□□□□□ -0.24
MMP28-203ENST00000612672 KRTAP13-1Q8IUC0 172 aa13.56□□□□□ -0.24
MMP28-203ENST00000612672 TP73-AS1Q9UF72 201 aa13.56□□□□□ -0.24
MMP28-203ENST00000612672 RPL37AP8A6NKH3 93 aa13.55□□□□□ -0.24
MMP28-203ENST00000612672 TEX43Q6ZNM6 134 aa13.55□□□□□ -0.24
MMP28-203ENST00000612672 CKS1BP61024 79 aa13.54□□□□□ -0.24
MMP28-203ENST00000612672 Q8IZM0 81 aa13.54□□□□□ -0.24
MMP28-203ENST00000612672 LINC00167Q96N53 147 aa13.54□□□□□ -0.24
MMP28-203ENST00000612672 AMELXQ99217 191 aa13.54□□□□□ -0.24
MMP28-203ENST00000612672 CDIP1Q9H305 208 aa13.54□□□□□ -0.24
MMP28-203ENST00000612672 PRSS2P07478 247 aa13.53□□□□□ -0.24
MMP28-203ENST00000612672 Q6ZN92 141 aa13.53□□□□□ -0.24
MMP28-203ENST00000612672 RAB5AP20339 215 aa13.52□□□□□ -0.25
MMP28-203ENST00000612672 C6orf226Q5I0X4 101 aa13.52□□□□□ -0.25
MMP28-203ENST00000612672 LINC00304Q8N9R0 145 aa13.52□□□□□ -0.25
MMP28-203ENST00000612672 ORMDL3Q8N138 153 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 150.7 ms