RNA–Protein interactions for RNA: ENST00000612570.4

NDFIP2-205, Transcript of Nedd4 family interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP2, Length 4,648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-205ENST00000612570 TRBV6-5A0A0K0K1A5 114 aa10.58□□□□□ -0.72
NDFIP2-205ENST00000612570 POLR2KP53803 58 aaKnown RBP10.58□□□□□ -0.72
NDFIP2-205ENST00000612570 JMJD7-PLA2G4BH0Y9G9 81 aa10.58□□□□□ -0.72
NDFIP2-205ENST00000612570 REG3AQ06141 175 aa10.58□□□□□ -0.72
NDFIP2-205ENST00000612570 C9orf85Q96MD7 179 aa10.58□□□□□ -0.72
NDFIP2-205ENST00000612570 DNAH14Q0VDD8 3507 aa10.58□□□□□ -0.72
NDFIP2-205ENST00000612570 HECTD1Q9ULT8 2610 aa10.57□□□□□ -0.72
NDFIP2-205ENST00000612570 WFDC9Q8NEX5 89 aa10.56□□□□□ -0.72
NDFIP2-205ENST00000612570 LINC00308Q8TCZ7 52 aa10.56□□□□□ -0.72
NDFIP2-205ENST00000612570 CHCHD10Q8WYQ3 142 aaPredicted RBP10.56□□□□□ -0.72
NDFIP2-205ENST00000612570 LOC100131303A0A0U1RQF7 123 aa10.55□□□□□ -0.72
NDFIP2-205ENST00000612570 TMEM223A0PJW6 202 aa10.55□□□□□ -0.72
NDFIP2-205ENST00000612570 UBE2AP49459 152 aa10.55□□□□□ -0.72
NDFIP2-205ENST00000612570 C20orf197Q8N268 126 aa10.55□□□□□ -0.72
NDFIP2-205ENST00000612570 TMEM258P61165 79 aa10.55□□□□□ -0.72
NDFIP2-205ENST00000612570 SPANXDQ9BXN6 97 aa10.54□□□□□ -0.72
NDFIP2-205ENST00000612570 ZNF580Q9UK33 172 aa10.54□□□□□ -0.72
NDFIP2-205ENST00000612570 TMEM256-PLSCR3K7ERE1 68 aa10.54□□□□□ -0.72
NDFIP2-205ENST00000612570 LINC00643Q86TS7 51 aa10.54□□□□□ -0.72
NDFIP2-205ENST00000612570 HILS1P60008 231 aa10.54□□□□□ -0.72
NDFIP2-205ENST00000612570 RBX1P62877 108 aa10.54□□□□□ -0.72
NDFIP2-205ENST00000612570 LY6G6DO95868 133 aa10.53□□□□□ -0.72
NDFIP2-205ENST00000612570 CXCL5P42830 114 aa10.53□□□□□ -0.72
NDFIP2-205ENST00000612570 A0A096LNJ9 63 aa10.53□□□□□ -0.72
NDFIP2-205ENST00000612570 PLA2G2AP14555 144 aa10.53□□□□□ -0.72
NDFIP2-205ENST00000612570 TSHBP01222 138 aa10.53□□□□□ -0.72
NDFIP2-205ENST00000612570 ODF3L2Q3SX64 289 aa10.52□□□□□ -0.72
NDFIP2-205ENST00000612570 C6orf99Q4VX62 202 aa10.52□□□□□ -0.72
NDFIP2-205ENST00000612570 COX7BP24311 80 aa10.52□□□□□ -0.73
NDFIP2-205ENST00000612570 CELSR3Q9NYQ7 3312 aa10.51□□□□□ -0.73
NDFIP2-205ENST00000612570 NDUFV3P56181 108 aaKnown RBP10.51□□□□□ -0.73
NDFIP2-205ENST00000612570 SMR3AQ99954 134 aa10.51□□□□□ -0.73
NDFIP2-205ENST00000612570 NDUFA7O95182 113 aa10.5□□□□□ -0.73
NDFIP2-205ENST00000612570 DSPP15924 2871 aaKnown RBP10.5□□□□□ -0.73
NDFIP2-205ENST00000612570 TRBV6-8A0A0A6YYG3 113 aa10.5□□□□□ -0.73
NDFIP2-205ENST00000612570 NDUFB1O75438 58 aa10.5□□□□□ -0.73
NDFIP2-205ENST00000612570 MP68P56378 58 aa10.5□□□□□ -0.73
NDFIP2-205ENST00000612570 C11orf45Q8TAV5 145 aa10.5□□□□□ -0.73
NDFIP2-205ENST00000612570 H0Y9J4 135 aa10.49□□□□□ -0.73
NDFIP2-205ENST00000612570 AKAP13Q12802 2813 aa10.49□□□□□ -0.73
NDFIP2-205ENST00000612570 PYGO1Q9Y3Y4 419 aa10.48□□□□□ -0.73
NDFIP2-205ENST00000612570 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.48□□□□□ -0.73
NDFIP2-205ENST00000612570 UFSP1Q6NVU6 142 aa10.48□□□□□ -0.73
NDFIP2-205ENST00000612570 UPK3BQ9BT76 320 aa10.48□□□□□ -0.73
NDFIP2-205ENST00000612570 BPY2O14599 106 aa10.47□□□□□ -0.73
NDFIP2-205ENST00000612570 ENHOQ6UWT2 76 aa10.47□□□□□ -0.73
NDFIP2-205ENST00000612570 POM121L12Q8N7R1 296 aa10.47□□□□□ -0.73
NDFIP2-205ENST00000612570 IGIPA6NJ69 53 aa10.47□□□□□ -0.73
NDFIP2-205ENST00000612570 DEFB131BA0A096LNP1 70 aa10.46□□□□□ -0.73
NDFIP2-205ENST00000612570 SMIM9A6NGZ8 99 aa10.46□□□□□ -0.73
NDFIP2-205ENST00000612570 TRBV6-4A0A1B0GX49 114 aa10.46□□□□□ -0.74
NDFIP2-205ENST00000612570 MAP1AP78559 2803 aaPredicted RBP10.46□□□□□ -0.74
NDFIP2-205ENST00000612570 J3KT08 172 aa10.46□□□□□ -0.74
NDFIP2-205ENST00000612570 IGKV2-28A0A075B6P5 120 aa10.45□□□□□ -0.74
NDFIP2-205ENST00000612570 IGKV2D-28P01615 120 aa10.45□□□□□ -0.74
NDFIP2-205ENST00000612570 C1orf158Q8N1D5 194 aa10.45□□□□□ -0.74
NDFIP2-205ENST00000612570 COL27A1Q8IZC6 1860 aaPredicted RBP10.45□□□□□ -0.74
NDFIP2-205ENST00000612570 IGLV2-18A0A075B6J9 118 aa10.45□□□□□ -0.74
NDFIP2-205ENST00000612570 IBA57-AS1B1ANH7 110 aa10.44□□□□□ -0.74
NDFIP2-205ENST00000612570 C3orf84H3BNL1 204 aa10.44□□□□□ -0.74
NDFIP2-205ENST00000612570 Q6ZQY7 126 aa10.44□□□□□ -0.74
NDFIP2-205ENST00000612570 LRCOL1A6NCL2 159 aa10.43□□□□□ -0.74
NDFIP2-205ENST00000612570 TRBV30A0A0K0K1B3 111 aa10.43□□□□□ -0.74
NDFIP2-205ENST00000612570 LYRM9A8MSI8 78 aa10.43□□□□□ -0.74
NDFIP2-205ENST00000612570 XGP55808 180 aa10.43□□□□□ -0.74
NDFIP2-205ENST00000612570 COL6A3P12111 3177 aa10.43□□□□□ -0.74
NDFIP2-205ENST00000612570 FAM19A5Q7Z5A7 132 aaPredicted RBP10.42□□□□□ -0.74
NDFIP2-205ENST00000612570 UBE2D4Q9Y2X8 147 aa10.42□□□□□ -0.74
NDFIP2-205ENST00000612570 CHKB-CPT1BH3BT56 60 aa10.41□□□□□ -0.74
NDFIP2-205ENST00000612570 CCKP06307 115 aa10.41□□□□□ -0.74
NDFIP2-205ENST00000612570 MPLKIPQ8TAP9 179 aa10.41□□□□□ -0.74
NDFIP2-205ENST00000612570 A0A087WZ39 114 aa10.4□□□□□ -0.74
NDFIP2-205ENST00000612570 IGLV1-51P01701 117 aa10.4□□□□□ -0.74
NDFIP2-205ENST00000612570 FAM19A1Q7Z5A9 133 aa10.4□□□□□ -0.74
NDFIP2-205ENST00000612570 PPDPFQ9H3Y8 114 aa10.4□□□□□ -0.75
NDFIP2-205ENST00000612570 BRK1Q8WUW1 75 aa10.39□□□□□ -0.75
NDFIP2-205ENST00000612570 PRR4Q16378 134 aa10.39□□□□□ -0.75
NDFIP2-205ENST00000612570 EYSQ5T1H1 3165 aa10.39□□□□□ -0.75
NDFIP2-205ENST00000612570 H7C423 109 aa10.38□□□□□ -0.75
NDFIP2-205ENST00000612570 SMIM11BQ8TCY0 68 aa10.38□□□□□ -0.75
NDFIP2-205ENST00000612570 PDE6GP18545 87 aa10.37□□□□□ -0.75
NDFIP2-205ENST00000612570 KIF25-AS1Q9Y6Z4 181 aa10.37□□□□□ -0.75
NDFIP2-205ENST00000612570 LINC00959A0A1B0GUT2 108 aa10.37□□□□□ -0.75
NDFIP2-205ENST00000612570 IGKV4-1P06312 121 aa10.37□□□□□ -0.75
NDFIP2-205ENST00000612570 MRPS36P82909 103 aaKnown RBP10.37□□□□□ -0.75
NDFIP2-205ENST00000612570 SYCNQ0VAF6 134 aa10.37□□□□□ -0.75
NDFIP2-205ENST00000612570 OXLD1Q5BKU9 147 aa10.37□□□□□ -0.75
NDFIP2-205ENST00000612570 LST1O00453 97 aa10.37□□□□□ -0.75
NDFIP2-205ENST00000612570 MIFP14174 115 aa10.37□□□□□ -0.75
NDFIP2-205ENST00000612570 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.37□□□□□ -0.75
NDFIP2-205ENST00000612570 FLNAP21333 2647 aaKnown RBP10.37□□□□□ -0.75
NDFIP2-205ENST00000612570 CFAP46Q8IYW2 2715 aa10.37□□□□□ -0.75
NDFIP2-205ENST00000612570 SPEGQ15772 3267 aa10.37□□□□□ -0.75
NDFIP2-205ENST00000612570 UQCRQO14949 82 aa10.37□□□□□ -0.75
NDFIP2-205ENST00000612570 CLUHP3Q96NS8 147 aa10.37□□□□□ -0.75
NDFIP2-205ENST00000612570 TSPEAR-AS2P59090 65 aa10.36□□□□□ -0.75
NDFIP2-205ENST00000612570 UBE2D3P61077 147 aa10.36□□□□□ -0.75
NDFIP2-205ENST00000612570 UBE2D2P62837 147 aa10.36□□□□□ -0.75
NDFIP2-205ENST00000612570 IGLV4-69A0A075B6H9 119 aa10.36□□□□□ -0.75
NDFIP2-205ENST00000612570 A0A0J9YWU9 116 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms