RNA–Protein interactions for RNA: ENST00000609602.1

LINC00896-202, long intergenic non-protein coding RNA 896, humanhuman

BASIC

Gene LINC00896, Length 2,128 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00896-202ENST00000609602 COX6A2Q02221 97 aa12.79□□□□□ -0.36
LINC00896-202ENST00000609602 LINC00242Q5T6M2 205 aa12.79□□□□□ -0.36
LINC00896-202ENST00000609602 IGLV5-39A0A0G2JS06 123 aa12.79□□□□□ -0.36
LINC00896-202ENST00000609602 IFITM1P13164 125 aa12.79□□□□□ -0.36
LINC00896-202ENST00000609602 CMC4P56277 68 aaPredicted RBP12.79□□□□□ -0.36
LINC00896-202ENST00000609602 SHISA2Q6UWI4 295 aa12.79□□□□□ -0.36
LINC00896-202ENST00000609602 GIG44P09565 113 aaPredicted RBP12.78□□□□□ -0.36
LINC00896-202ENST00000609602 NTM-AS1Q6ZSK4 140 aa12.78□□□□□ -0.36
LINC00896-202ENST00000609602 LINC01600Q96MT4 127 aa12.77□□□□□ -0.36
LINC00896-202ENST00000609602 ICOSQ9Y6W8 199 aa12.77□□□□□ -0.37
LINC00896-202ENST00000609602 LINC01620Q4KN68 170 aa12.76□□□□□ -0.37
LINC00896-202ENST00000609602 SPATA3Q8NHX4 192 aa12.76□□□□□ -0.37
LINC00896-202ENST00000609602 CMYA5Q8N3K9 4069 aa12.76□□□□□ -0.37
LINC00896-202ENST00000609602 NPC2P61916 151 aa12.76□□□□□ -0.37
LINC00896-202ENST00000609602 NOP10Q9NPE3 64 aaKnown RBP12.76□□□□□ -0.37
LINC00896-202ENST00000609602 KRTAP21-3Q3LHN1 58 aa12.75□□□□□ -0.37
LINC00896-202ENST00000609602 NOTCH3Q9UM47 2321 aa12.75□□□□□ -0.37
LINC00896-202ENST00000609602 PLAC8L1A1L4L8 177 aa12.74□□□□□ -0.37
LINC00896-202ENST00000609602 FAM110AQ9BQ89 295 aa12.74□□□□□ -0.37
LINC00896-202ENST00000609602 GAGE12JA6NER3 117 aa12.74□□□□□ -0.37
LINC00896-202ENST00000609602 PF4P02776 101 aa12.74□□□□□ -0.37
LINC00896-202ENST00000609602 GAGE4Q13068 117 aa12.74□□□□□ -0.37
LINC00896-202ENST00000609602 GAGE5Q13069 117 aa12.74□□□□□ -0.37
LINC00896-202ENST00000609602 CIRBPQ14011 172 aaKnown RBP12.74□□□□□ -0.37
LINC00896-202ENST00000609602 C16orf74Q96GX8 76 aa12.74□□□□□ -0.37
LINC00896-202ENST00000609602 CDC42SE2Q9NRR3 84 aa12.74□□□□□ -0.37
LINC00896-202ENST00000609602 SMIM1B2RUZ4 78 aa12.73□□□□□ -0.37
LINC00896-202ENST00000609602 Q9H8V8 135 aa12.73□□□□□ -0.37
LINC00896-202ENST00000609602 TRBV10-2A0A0K0K1G8 114 aa12.73□□□□□ -0.37
LINC00896-202ENST00000609602 LINC00482Q8N8I6 264 aa12.73□□□□□ -0.37
LINC00896-202ENST00000609602 DAND5Q8N907 189 aa12.73□□□□□ -0.37
LINC00896-202ENST00000609602 C19orf73Q9NVV2 129 aa12.73□□□□□ -0.37
LINC00896-202ENST00000609602 TRAV13-1A0A0B4J241 112 aa12.72□□□□□ -0.37
LINC00896-202ENST00000609602 IGLV1-51P01701 117 aa12.72□□□□□ -0.37
LINC00896-202ENST00000609602 COX6CP09669 75 aa12.72□□□□□ -0.37
LINC00896-202ENST00000609602 WFDC10AQ9H1F0 79 aa12.71□□□□□ -0.38
LINC00896-202ENST00000609602 F5H768 121 aa12.7□□□□□ -0.38
LINC00896-202ENST00000609602 XGP55808 180 aa12.7□□□□□ -0.38
LINC00896-202ENST00000609602 LINC00308Q8TCZ7 52 aa12.7□□□□□ -0.38
LINC00896-202ENST00000609602 CIDEAO60543 219 aa12.7□□□□□ -0.38
LINC00896-202ENST00000609602 RPL13AP40429 203 aaKnown RBP12.7□□□□□ -0.38
LINC00896-202ENST00000609602 CSNK1G2-AS1Q8NCQ2 148 aa12.7□□□□□ -0.38
LINC00896-202ENST00000609602 OVOL2Q9BRP0 275 aa12.7□□□□□ -0.38
LINC00896-202ENST00000609602 TMEM243Q9BU79 118 aa12.7□□□□□ -0.38
LINC00896-202ENST00000609602 TMEM262E9PQX1 116 aa12.69□□□□□ -0.38
LINC00896-202ENST00000609602 MT-ATP8P03928 68 aa12.69□□□□□ -0.38
LINC00896-202ENST00000609602 RPL35AP18077 110 aaKnown RBP12.69□□□□□ -0.38
LINC00896-202ENST00000609602 ZNF625Q96I27 306 aaPredicted RBP12.69□□□□□ -0.38
LINC00896-202ENST00000609602 TRGV2A0A075B6R0 118 aa12.68□□□□□ -0.38
LINC00896-202ENST00000609602 TRBV6-4A0A1B0GX49 114 aa12.68□□□□□ -0.38
LINC00896-202ENST00000609602 GAGE7O76087 117 aa12.68□□□□□ -0.38
LINC00896-202ENST00000609602 GAGE12FP0CL80 117 aa12.68□□□□□ -0.38
LINC00896-202ENST00000609602 GAGE12GP0CL81 117 aa12.68□□□□□ -0.38
LINC00896-202ENST00000609602 GAGE12IP0CL82 117 aa12.68□□□□□ -0.38
LINC00896-202ENST00000609602 NTN5Q8WTR8 489 aaPredicted RBP12.68□□□□□ -0.38
LINC00896-202ENST00000609602 UBE2L6O14933 153 aa12.68□□□□□ -0.38
LINC00896-202ENST00000609602 H7C423 109 aa12.67□□□□□ -0.38
LINC00896-202ENST00000609602 LST1O00453 97 aa12.67□□□□□ -0.38
LINC00896-202ENST00000609602 COPS9Q8WXC6 57 aa12.67□□□□□ -0.38
LINC00896-202ENST00000609602 CLEC2BQ92478 149 aa12.65□□□□□ -0.38
LINC00896-202ENST00000609602 MGAM2Q2M2H8 2515 aa12.65□□□□□ -0.38
LINC00896-202ENST00000609602 LOC100131303A0A0U1RQF7 123 aa12.65□□□□□ -0.38
LINC00896-202ENST00000609602 H3BT86 120 aa12.65□□□□□ -0.38
LINC00896-202ENST00000609602 HERV-K104P63124 156 aa12.65□□□□□ -0.38
LINC00896-202ENST00000609602 C2orf82Q6UX34 121 aa12.65□□□□□ -0.38
LINC00896-202ENST00000609602 SOSTDC1Q6X4U4 206 aa12.64□□□□□ -0.39
LINC00896-202ENST00000609602 TRGV4A0A0C4DH28 118 aa12.63□□□□□ -0.39
LINC00896-202ENST00000609602 TEX49A0A1B0GTD5 131 aa12.63□□□□□ -0.39
LINC00896-202ENST00000609602 PPDPFQ9H3Y8 114 aa12.63□□□□□ -0.39
LINC00896-202ENST00000609602 A0A0U1RRA0 63 aa12.62□□□□□ -0.39
LINC00896-202ENST00000609602 A0A1B0GV72 72 aa12.62□□□□□ -0.39
LINC00896-202ENST00000609602 MEIG1Q5JSS6 88 aa12.62□□□□□ -0.39
LINC00896-202ENST00000609602 WFDC9Q8NEX5 89 aa12.62□□□□□ -0.39
LINC00896-202ENST00000609602 UBE2WQ96B02 151 aa12.62□□□□□ -0.39
LINC00896-202ENST00000609602 FHL2Q14192 279 aa12.61□□□□□ -0.39
LINC00896-202ENST00000609602 NBEAL1Q6ZS30 2694 aa12.61□□□□□ -0.39
LINC00896-202ENST00000609602 NOTCH1P46531 2555 aa12.59□□□□□ -0.39
LINC00896-202ENST00000609602 TRBV6-8A0A0A6YYG3 113 aa12.59□□□□□ -0.39
LINC00896-202ENST00000609602 CKS1BP61024 79 aa12.59□□□□□ -0.39
LINC00896-202ENST00000609602 GAGE6Q13070 117 aa12.59□□□□□ -0.39
LINC00896-202ENST00000609602 COX7A2LO14548 114 aa12.58□□□□□ -0.4
LINC00896-202ENST00000609602 TRAV8-4A0A0B4J246 113 aa12.57□□□□□ -0.4
LINC00896-202ENST00000609602 COX7B2Q8TF08 81 aa12.57□□□□□ -0.4
LINC00896-202ENST00000609602 C9orf66Q5T8R8 295 aa12.56□□□□□ -0.4
LINC00896-202ENST00000609602 IGLV4-60A0A075B6I1 120 aa12.56□□□□□ -0.4
LINC00896-202ENST00000609602 OXLD1Q5BKU9 147 aa12.56□□□□□ -0.4
LINC00896-202ENST00000609602 DEFB121Q5J5C9 76 aa12.55□□□□□ -0.4
LINC00896-202ENST00000609602 IGHV3OR16-9A0A0B4J2B5 98 aa12.54□□□□□ -0.4
LINC00896-202ENST00000609602 LINC00612Q8N6U2 182 aa12.54□□□□□ -0.4
LINC00896-202ENST00000609602 KIR2DL5BQ8NHK3 375 aa12.54□□□□□ -0.4
LINC00896-202ENST00000609602 CHCHD5Q9BSY4 110 aa12.54□□□□□ -0.4
LINC00896-202ENST00000609602 IGKV3OR2-268A0A0C4DH90 116 aa12.52□□□□□ -0.4
LINC00896-202ENST00000609602 A0A087WZ39 114 aa12.51□□□□□ -0.41
LINC00896-202ENST00000609602 FAM222AQ5U5X8 452 aa12.51□□□□□ -0.41
LINC00896-202ENST00000609602 DNAH3Q8TD57 4116 aa12.51□□□□□ -0.41
LINC00896-202ENST00000609602 FAM240AA0A1B0GVK7 77 aa12.5□□□□□ -0.41
LINC00896-202ENST00000609602 SNCGO76070 127 aa12.5□□□□□ -0.41
LINC00896-202ENST00000609602 DEFB130BP0DP73 79 aa12.5□□□□□ -0.41
LINC00896-202ENST00000609602 DEFB130AP0DP74 79 aa12.5□□□□□ -0.41
LINC00896-202ENST00000609602 MIR7-3HGQ8N6C7 128 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms