RNA–Protein interactions for RNA: ENST00000603621.1

TUBE1-204, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-204ENST00000603621 SYCNQ0VAF6 134 aa9.19□□□□□ -0.94
TUBE1-204ENST00000603621 ORMDL2Q53FV1 153 aa9.19□□□□□ -0.94
TUBE1-204ENST00000603621 NXT2Q9NPJ8 142 aaKnown RBP9.19□□□□□ -0.94
TUBE1-204ENST00000603621 CYSLTR1Q9Y271 337 aa9.19□□□□□ -0.94
TUBE1-204ENST00000603621 PYGO1Q9Y3Y4 419 aa9.19□□□□□ -0.94
TUBE1-204ENST00000603621 A0A087WYN8 130 aa9.18□□□□□ -0.94
TUBE1-204ENST00000603621 APOMO95445 188 aa9.18□□□□□ -0.94
TUBE1-204ENST00000603621 CIRBPQ14011 172 aaKnown RBP9.18□□□□□ -0.94
TUBE1-204ENST00000603621 MAJINQ3KP22 176 aa9.18□□□□□ -0.94
TUBE1-204ENST00000603621 TMEM141Q96I45 108 aa9.18□□□□□ -0.94
TUBE1-204ENST00000603621 GNB1LQ9BYB4 327 aa9.18□□□□□ -0.94
TUBE1-204ENST00000603621 FABP9Q0Z7S8 132 aa9.17□□□□□ -0.94
TUBE1-204ENST00000603621 ZC2HC1BQ5TFG8 222 aa9.17□□□□□ -0.94
TUBE1-204ENST00000603621 TEX43Q6ZNM6 134 aa9.17□□□□□ -0.94
TUBE1-204ENST00000603621 SPACA4Q8TDM5 124 aa9.17□□□□□ -0.94
TUBE1-204ENST00000603621 CAMK2N2Q96S95 79 aa9.17□□□□□ -0.94
TUBE1-204ENST00000603621 A0A096LNI7 61 aa9.16□□□□□ -0.94
TUBE1-204ENST00000603621 RPL37AP61513 92 aaKnown RBP9.16□□□□□ -0.94
TUBE1-204ENST00000603621 SPAG11BQ08648 103 aa9.16□□□□□ -0.94
TUBE1-204ENST00000603621 COX19Q49B96 90 aa9.16□□□□□ -0.94
TUBE1-204ENST00000603621 Q6ZN92 141 aa9.16□□□□□ -0.94
TUBE1-204ENST00000603621 Q6ZRU5 148 aa9.16□□□□□ -0.94
TUBE1-204ENST00000603621 ORAOV1Q8WV07 137 aa9.16□□□□□ -0.94
TUBE1-204ENST00000603621 MRPL18Q9H0U6 180 aaKnown RBP9.16□□□□□ -0.94
TUBE1-204ENST00000603621 TGIF2-C20orf24A0A0A6YYL0 155 aa9.15□□□□□ -0.94
TUBE1-204ENST00000603621 IGHV3OR16-9A0A0B4J2B5 98 aa9.15□□□□□ -0.94
TUBE1-204ENST00000603621 K7EMI3 77 aa9.15□□□□□ -0.94
TUBE1-204ENST00000603621 NDUFA5Q16718 116 aa9.15□□□□□ -0.94
TUBE1-204ENST00000603621 C2orf88Q9BSF0 95 aa9.15□□□□□ -0.94
TUBE1-204ENST00000603621 ALKBH7Q9BT30 221 aaPredicted RBP9.15□□□□□ -0.94
TUBE1-204ENST00000603621 VCX2Q9H322 139 aa9.15□□□□□ -0.94
TUBE1-204ENST00000603621 MYCBP2O75592 4640 aa9.15□□□□□ -0.95
TUBE1-204ENST00000603621 LINC00242Q5T6M2 205 aa9.14□□□□□ -0.95
TUBE1-204ENST00000603621 STPG4Q8N801 248 aa9.14□□□□□ -0.95
TUBE1-204ENST00000603621 SNAPINO95295 136 aa9.13□□□□□ -0.95
TUBE1-204ENST00000603621 MT-ND6P03923 174 aa9.13□□□□□ -0.95
TUBE1-204ENST00000603621 G0S2P27469 103 aa9.13□□□□□ -0.95
TUBE1-204ENST00000603621 KRTAP10-4P60372 401 aaPredicted RBP9.13□□□□□ -0.95
TUBE1-204ENST00000603621 SVBPQ8N300 66 aa9.13□□□□□ -0.95
TUBE1-204ENST00000603621 OR10D4PQ8NGN7 298 aa9.13□□□□□ -0.95
TUBE1-204ENST00000603621 C2orf48Q96LS8 159 aa9.13□□□□□ -0.95
TUBE1-204ENST00000603621 PKIGQ9Y2B9 76 aa9.13□□□□□ -0.95
TUBE1-204ENST00000603621 A0A0J9YXV3 536 aa9.12□□□□□ -0.95
TUBE1-204ENST00000603621 IGIPA6NJ69 53 aa9.12□□□□□ -0.95
TUBE1-204ENST00000603621 UBE2D1P51668 147 aa9.12□□□□□ -0.95
TUBE1-204ENST00000603621 GAGE2BQ13066 116 aa9.12□□□□□ -0.95
TUBE1-204ENST00000603621 LINC00173Q6ZV60 143 aa9.12□□□□□ -0.95
TUBE1-204ENST00000603621 PLAC8Q9NZF1 115 aa9.12□□□□□ -0.95
TUBE1-204ENST00000603621 PKHD1L1Q86WI1 4243 aa9.11□□□□□ -0.95
TUBE1-204ENST00000603621 LOC107984640A0A0U1RRK4 108 aa9.11□□□□□ -0.95
TUBE1-204ENST00000603621 FA2HQ7L5A8 372 aa9.11□□□□□ -0.95
TUBE1-204ENST00000603621 TOMM6Q96B49 74 aa9.11□□□□□ -0.95
TUBE1-204ENST00000603621 SCGB3A1Q96QR1 104 aa9.11□□□□□ -0.95
TUBE1-204ENST00000603621 AMELXQ99217 191 aa9.11□□□□□ -0.95
TUBE1-204ENST00000603621 TRAPPC1Q9Y5R8 145 aa9.11□□□□□ -0.95
TUBE1-204ENST00000603621 A0A087WZ39 114 aa9.1□□□□□ -0.95
TUBE1-204ENST00000603621 RPL18AQ02543 176 aaKnown RBP9.1□□□□□ -0.95
TUBE1-204ENST00000603621 SMCO4Q9NRQ5 59 aa9.1□□□□□ -0.95
TUBE1-204ENST00000603621 LINC00474Q9P2X8 69 aa9.1□□□□□ -0.95
TUBE1-204ENST00000603621 DMBT1Q9UGM3 2413 aaPredicted RBP9.1□□□□□ -0.95
TUBE1-204ENST00000603621 NDUFA1O15239 70 aa9.09□□□□□ -0.95
TUBE1-204ENST00000603621 NPSP0C0P6 89 aa9.09□□□□□ -0.95
TUBE1-204ENST00000603621 PTTG1IPP53801 180 aa9.09□□□□□ -0.95
TUBE1-204ENST00000603621 PAPPA-AS1Q5QFB9 102 aa9.09□□□□□ -0.95
TUBE1-204ENST00000603621 C7orf33Q8WU49 177 aa9.09□□□□□ -0.95
TUBE1-204ENST00000603621 TIMM17AQ99595 171 aa9.09□□□□□ -0.95
TUBE1-204ENST00000603621 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.08□□□□□ -0.96
TUBE1-204ENST00000603621 C10orf25Q5T742 122 aa9.08□□□□□ -0.96
TUBE1-204ENST00000603621 UNQ6190/PRO20217Q6UXQ8 127 aa9.08□□□□□ -0.96
TUBE1-204ENST00000603621 ERASQ7Z444 233 aa9.08□□□□□ -0.96
TUBE1-204ENST00000603621 LINC01546A6NGU7 62 aa9.07□□□□□ -0.96
TUBE1-204ENST00000603621 J3QL48 77 aa9.07□□□□□ -0.96
TUBE1-204ENST00000603621 HNRNPA3P51991 378 aaKnown RBP9.07□□□□□ -0.96
TUBE1-204ENST00000603621 RNF151Q2KHN1 245 aa9.06□□□□□ -0.96
TUBE1-204ENST00000603621 C2orf82Q6UX34 121 aa9.06□□□□□ -0.96
TUBE1-204ENST00000603621 GEMIN7Q9H840 131 aaKnown RBP9.06□□□□□ -0.96
TUBE1-204ENST00000603621 MRPL35Q9NZE8 188 aaKnown RBP9.06□□□□□ -0.96
TUBE1-204ENST00000603621 TOMM7Q9P0U1 55 aa9.06□□□□□ -0.96
TUBE1-204ENST00000603621 HERC1Q15751 4861 aa9.05□□□□□ -0.96
TUBE1-204ENST00000603621 F8WDY8 70 aa9.05□□□□□ -0.96
TUBE1-204ENST00000603621 HERVK_113P63121 156 aa9.05□□□□□ -0.96
TUBE1-204ENST00000603621 KIAA0087Q14695 138 aa9.05□□□□□ -0.96
TUBE1-204ENST00000603621 C18orf32Q8TCD1 76 aa9.05□□□□□ -0.96
TUBE1-204ENST00000603621 C6orf48Q9UBA6 75 aa9.05□□□□□ -0.96
TUBE1-204ENST00000603621 LRP1Q07954 4544 aaKnown RBP9.04□□□□□ -0.96
TUBE1-204ENST00000603621 FAT3Q8TDW7 4589 aa9.04□□□□□ -0.96
TUBE1-204ENST00000603621 LINC01549A6NIU2 74 aa9.04□□□□□ -0.96
TUBE1-204ENST00000603621 PRSS2P07478 247 aa9.04□□□□□ -0.96
TUBE1-204ENST00000603621 SEC11AP67812 179 aa9.04□□□□□ -0.96
TUBE1-204ENST00000603621 FAM19A3Q7Z5A8 133 aa9.04□□□□□ -0.96
TUBE1-204ENST00000603621 SLC7A5P1Q8MH63 180 aa9.04□□□□□ -0.96
TUBE1-204ENST00000603621 LINC01561Q8N1V8 128 aa9.04□□□□□ -0.96
TUBE1-204ENST00000603621 CDKN2A-AS1Q9UH64 79 aa9.04□□□□□ -0.96
TUBE1-204ENST00000603621 A0A1W2PNN7 141 aa9.03□□□□□ -0.96
TUBE1-204ENST00000603621 URB1-AS1Q96HZ7 61 aa9.03□□□□□ -0.96
TUBE1-204ENST00000603621 PACRGQ96M98 296 aaPredicted RBP9.03□□□□□ -0.96
TUBE1-204ENST00000603621 KRTAP29-1A8MX34 341 aaPredicted RBP9.02□□□□□ -0.97
TUBE1-204ENST00000603621 LINC00614P0C842 121 aa9.02□□□□□ -0.97
TUBE1-204ENST00000603621 PMCHL1Q16048 86 aa9.02□□□□□ -0.97
TUBE1-204ENST00000603621 GAGE2EQ4V326 116 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms