RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 MALP21145 153 aa9.03□□□□□ -0.96
RNF40-212ENST00000602784 SEC11AP67812 179 aa9.03□□□□□ -0.96
RNF40-212ENST00000602784 DYNC1H1Q14204 4646 aaKnown RBP9.02□□□□□ -0.97
RNF40-212ENST00000602784 CDK2AP2O75956 126 aa9.02□□□□□ -0.97
RNF40-212ENST00000602784 ATP5LO75964 103 aa9.02□□□□□ -0.97
RNF40-212ENST00000602784 APOMO95445 188 aa9.02□□□□□ -0.97
RNF40-212ENST00000602784 KRTAP10-1P60331 282 aa9.02□□□□□ -0.97
RNF40-212ENST00000602784 PMCHL1Q16048 86 aa9.02□□□□□ -0.97
RNF40-212ENST00000602784 ZC2HC1BQ5TFG8 222 aa9.02□□□□□ -0.97
RNF40-212ENST00000602784 C5orf38Q86SI9 138 aa9.02□□□□□ -0.97
RNF40-212ENST00000602784 CST9LQ9H4G1 147 aa9.02□□□□□ -0.97
RNF40-212ENST00000602784 A0A087WZ39 114 aa9.01□□□□□ -0.97
RNF40-212ENST00000602784 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.01□□□□□ -0.97
RNF40-212ENST00000602784 HSBP1O75506 76 aa9.01□□□□□ -0.97
RNF40-212ENST00000602784 COX6A2Q02221 97 aa9.01□□□□□ -0.97
RNF40-212ENST00000602784 PMVKQ15126 192 aa9.01□□□□□ -0.97
RNF40-212ENST00000602784 LINC01561Q8N1V8 128 aa9.01□□□□□ -0.97
RNF40-212ENST00000602784 C9orf163Q8N9P6 203 aa9.01□□□□□ -0.97
RNF40-212ENST00000602784 SLPIP03973 132 aa9□□□□□ -0.97
RNF40-212ENST00000602784 HERVK_113P63121 156 aa9□□□□□ -0.97
RNF40-212ENST00000602784 HIGD2BQ4VC39 106 aa9□□□□□ -0.97
RNF40-212ENST00000602784 IGHV3-64A0A075B6Q5 118 aa8.99□□□□□ -0.97
RNF40-212ENST00000602784 ZNF561-AS1K7EIQ3 104 aa8.99□□□□□ -0.97
RNF40-212ENST00000602784 SERF1AO75920 110 aa8.99□□□□□ -0.97
RNF40-212ENST00000602784 OR10D4PQ8NGN7 298 aa8.99□□□□□ -0.97
RNF40-212ENST00000602784 DNAH5Q8TE73 4624 aa8.99□□□□□ -0.97
RNF40-212ENST00000602784 TINCRA0A1B0GVN0 87 aa8.98□□□□□ -0.97
RNF40-212ENST00000602784 HIST1H2BKO60814 126 aa8.98□□□□□ -0.97
RNF40-212ENST00000602784 HIST1H2BJP06899 126 aa8.98□□□□□ -0.97
RNF40-212ENST00000602784 HIST1H2BOP23527 126 aa8.98□□□□□ -0.97
RNF40-212ENST00000602784 HIST1H2BBP33778 126 aa8.98□□□□□ -0.97
RNF40-212ENST00000602784 HIST1H2BDP58876 126 aa8.98□□□□□ -0.97
RNF40-212ENST00000602784 LINC00310P59036 64 aa8.98□□□□□ -0.97
RNF40-212ENST00000602784 HIST1H2BCP62807 126 aa8.98□□□□□ -0.97
RNF40-212ENST00000602784 HIST2H2BEQ16778 126 aa8.98□□□□□ -0.97
RNF40-212ENST00000602784 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.98□□□□□ -0.97
RNF40-212ENST00000602784 HIST1H2BHQ93079 126 aa8.98□□□□□ -0.97
RNF40-212ENST00000602784 HIST1H2BNQ99877 126 aa8.98□□□□□ -0.97
RNF40-212ENST00000602784 HIST1H2BMQ99879 126 aa8.98□□□□□ -0.97
RNF40-212ENST00000602784 GEMIN7Q9H840 131 aaKnown RBP8.98□□□□□ -0.97
RNF40-212ENST00000602784 LRP1BQ9NZR2 4599 aa8.97□□□□□ -0.97
RNF40-212ENST00000602784 A0A0J9YXV3 536 aa8.97□□□□□ -0.97
RNF40-212ENST00000602784 F8WDY8 70 aa8.97□□□□□ -0.97
RNF40-212ENST00000602784 LINC01620Q4KN68 170 aa8.97□□□□□ -0.97
RNF40-212ENST00000602784 Q6ZSA8 131 aa8.97□□□□□ -0.97
RNF40-212ENST00000602784 FAM19A2Q8N3H0 131 aa8.97□□□□□ -0.97
RNF40-212ENST00000602784 C2orf48Q96LS8 159 aa8.97□□□□□ -0.97
RNF40-212ENST00000602784 IGLV4-69A0A075B6H9 119 aa8.96□□□□□ -0.98
RNF40-212ENST00000602784 IGLV5-45A0A087WSX0 123 aa8.96□□□□□ -0.98
RNF40-212ENST00000602784 SDIM1Q6ZPB5 146 aa8.96□□□□□ -0.98
RNF40-212ENST00000602784 ORAOV1Q8WV07 137 aa8.96□□□□□ -0.98
RNF40-212ENST00000602784 IFI27L1Q96BM0 104 aa8.96□□□□□ -0.98
RNF40-212ENST00000602784 NDUFA6P56556 154 aa8.95□□□□□ -0.98
RNF40-212ENST00000602784 SPAG11BQ08648 103 aa8.95□□□□□ -0.98
RNF40-212ENST00000602784 SYCNQ0VAF6 134 aa8.95□□□□□ -0.98
RNF40-212ENST00000602784 LINC00526Q96FQ7 95 aa8.95□□□□□ -0.98
RNF40-212ENST00000602784 CDKN2A-AS1Q9UH64 79 aa8.95□□□□□ -0.98
RNF40-212ENST00000602784 TRAV12-1A0A0B4J245 112 aa8.94□□□□□ -0.98
RNF40-212ENST00000602784 NUPR1O60356 82 aa8.94□□□□□ -0.98
RNF40-212ENST00000602784 IGLC3P0DOY3 106 aa8.94□□□□□ -0.98
RNF40-212ENST00000602784 CARD19Q96LW7 228 aa8.94□□□□□ -0.98
RNF40-212ENST00000602784 FAM30AQ9NZY2 134 aa8.94□□□□□ -0.98
RNF40-212ENST00000602784 LEPROTL1O95214 131 aa8.93□□□□□ -0.98
RNF40-212ENST00000602784 XGP55808 180 aa8.93□□□□□ -0.98
RNF40-212ENST00000602784 KIAA0087Q14695 138 aa8.93□□□□□ -0.98
RNF40-212ENST00000602784 LINC00469Q8N7U9 141 aa8.93□□□□□ -0.98
RNF40-212ENST00000602784 PKIGQ9Y2B9 76 aa8.93□□□□□ -0.98
RNF40-212ENST00000602784 COA6Q5JTJ3 125 aaKnown RBP8.92□□□□□ -0.98
RNF40-212ENST00000602784 CAMK2N2Q96S95 79 aa8.92□□□□□ -0.98
RNF40-212ENST00000602784 HSPB8Q9UJY1 196 aa8.92□□□□□ -0.98
RNF40-212ENST00000602784 KIAA1109Q2LD37 5005 aa8.91□□□□□ -0.98
RNF40-212ENST00000602784 H3BRM9 83 aa8.91□□□□□ -0.98
RNF40-212ENST00000602784 RNF151Q2KHN1 245 aa8.91□□□□□ -0.98
RNF40-212ENST00000602784 Q6ZRU5 148 aa8.91□□□□□ -0.98
RNF40-212ENST00000602784 PACRGQ96M98 296 aaPredicted RBP8.91□□□□□ -0.98
RNF40-212ENST00000602784 CHAC1Q9BUX1 264 aa8.91□□□□□ -0.98
RNF40-212ENST00000602784 SMIM1B2RUZ4 78 aa8.9□□□□□ -0.98
RNF40-212ENST00000602784 NDUFA1O15239 70 aa8.9□□□□□ -0.98
RNF40-212ENST00000602784 Q8IZM0 81 aa8.9□□□□□ -0.98
RNF40-212ENST00000602784 MRPL35Q9NZE8 188 aaKnown RBP8.9□□□□□ -0.98
RNF40-212ENST00000602784 CHTOPQ9Y3Y2 248 aaKnown RBP8.9□□□□□ -0.98
RNF40-212ENST00000602784 PRSS2P07478 247 aa8.89□□□□□ -0.99
RNF40-212ENST00000602784 CIRBPQ14011 172 aaKnown RBP8.89□□□□□ -0.99
RNF40-212ENST00000602784 C6orf226Q5I0X4 101 aa8.89□□□□□ -0.99
RNF40-212ENST00000602784 C11orf86A6NJI1 115 aa8.88□□□□□ -0.99
RNF40-212ENST00000602784 F8VRH5 84 aa8.88□□□□□ -0.99
RNF40-212ENST00000602784 FABP4P15090 132 aa8.88□□□□□ -0.99
RNF40-212ENST00000602784 LINC00474Q9P2X8 69 aa8.88□□□□□ -0.99
RNF40-212ENST00000602784 APOBP04114 4563 aaKnown RBP8.88□□□□□ -0.99
RNF40-212ENST00000602784 LOC107984640A0A0U1RRK4 108 aa8.87□□□□□ -0.99
RNF40-212ENST00000602784 ZNF22P17026 224 aaPredicted RBP8.87□□□□□ -0.99
RNF40-212ENST00000602784 UNQ6190/PRO20217Q6UXQ8 127 aa8.87□□□□□ -0.99
RNF40-212ENST00000602784 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.87□□□□□ -0.99
RNF40-212ENST00000602784 IGLV5-39A0A0G2JS06 123 aa8.86□□□□□ -0.99
RNF40-212ENST00000602784 TRBV30A0A0K0K1B3 111 aa8.86□□□□□ -0.99
RNF40-212ENST00000602784 SPINK8P0C7L1 97 aa8.86□□□□□ -0.99
RNF40-212ENST00000602784 CXCL5P42830 114 aa8.86□□□□□ -0.99
RNF40-212ENST00000602784 CKS1BP61024 79 aa8.86□□□□□ -0.99
RNF40-212ENST00000602784 ODF1Q14990 250 aa8.86□□□□□ -0.99
RNF40-212ENST00000602784 C10orf25Q5T742 122 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms