RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 PRO0255Q9UI72 69 aa12.11□□□□□ -0.47
PPFIA3-207ENST00000602716 APOMO95445 188 aa12.1□□□□□ -0.47
PPFIA3-207ENST00000602716 GYPEP15421 78 aa12.1□□□□□ -0.47
PPFIA3-207ENST00000602716 ZNF22P17026 224 aaPredicted RBP12.1□□□□□ -0.47
PPFIA3-207ENST00000602716 TRAV26-1A0A087WT03 109 aa12.1□□□□□ -0.47
PPFIA3-207ENST00000602716 C11orf45Q8TAV5 145 aa12.1□□□□□ -0.47
PPFIA3-207ENST00000602716 J3QR89 54 aa12.09□□□□□ -0.47
PPFIA3-207ENST00000602716 CFC1BP0CG36 223 aa12.09□□□□□ -0.47
PPFIA3-207ENST00000602716 CFC1P0CG37 223 aa12.09□□□□□ -0.47
PPFIA3-207ENST00000602716 VCX2Q9H322 139 aa12.09□□□□□ -0.47
PPFIA3-207ENST00000602716 A0A0J9YXV3 536 aa12.08□□□□□ -0.48
PPFIA3-207ENST00000602716 PAX4O43316 350 aa12.08□□□□□ -0.48
PPFIA3-207ENST00000602716 PYGO1Q9Y3Y4 419 aa12.08□□□□□ -0.48
PPFIA3-207ENST00000602716 A0A096LPF7 62 aa12.08□□□□□ -0.48
PPFIA3-207ENST00000602716 FAM104AQ969W3 186 aa12.08□□□□□ -0.48
PPFIA3-207ENST00000602716 LOC107984156A0A0G2JMH3 177 aa12.07□□□□□ -0.48
PPFIA3-207ENST00000602716 NTM-AS1Q6ZSK4 140 aa12.07□□□□□ -0.48
PPFIA3-207ENST00000602716 ARL17AQ8IVW1 177 aa12.07□□□□□ -0.48
PPFIA3-207ENST00000602716 SMCPP49901 116 aaPredicted RBP12.06□□□□□ -0.48
PPFIA3-207ENST00000602716 SFTA2Q6UW10 78 aa12.06□□□□□ -0.48
PPFIA3-207ENST00000602716 PSMB2P49721 201 aa12.06□□□□□ -0.48
PPFIA3-207ENST00000602716 LYRM7Q5U5X0 104 aa12.06□□□□□ -0.48
PPFIA3-207ENST00000602716 CHCHD7Q9BUK0 85 aa12.06□□□□□ -0.48
PPFIA3-207ENST00000602716 STAB2Q8WWQ8 2551 aa12.05□□□□□ -0.48
PPFIA3-207ENST00000602716 C10orf126Q8N4M7 172 aa12.05□□□□□ -0.48
PPFIA3-207ENST00000602716 IGHV3-64A0A075B6Q5 118 aa12.04□□□□□ -0.48
PPFIA3-207ENST00000602716 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.04□□□□□ -0.48
PPFIA3-207ENST00000602716 IGKV2-29A2NJV5 120 aaPredicted RBP12.04□□□□□ -0.48
PPFIA3-207ENST00000602716 GAGE12HA6NDE8 117 aa12.04□□□□□ -0.48
PPFIA3-207ENST00000602716 ATP6V0E2Q8NHE4 81 aa12.04□□□□□ -0.48
PPFIA3-207ENST00000602716 PRO1854Q9UHT4 67 aa12.04□□□□□ -0.48
PPFIA3-207ENST00000602716 MRPS36P82909 103 aaKnown RBP12.03□□□□□ -0.48
PPFIA3-207ENST00000602716 DAZ4Q86SG3 579 aaKnown RBP12.03□□□□□ -0.48
PPFIA3-207ENST00000602716 DAZ3Q9NR90 486 aaKnown RBP12.03□□□□□ -0.48
PPFIA3-207ENST00000602716 FBN3Q75N90 2809 aa12.02□□□□□ -0.48
PPFIA3-207ENST00000602716 A4D1N5 150 aa12.02□□□□□ -0.49
PPFIA3-207ENST00000602716 EIF4EBP3O60516 100 aaPredicted RBP12.02□□□□□ -0.49
PPFIA3-207ENST00000602716 TCL1BO95988 128 aa12.02□□□□□ -0.49
PPFIA3-207ENST00000602716 TRBV20-1A0A075B6N2 111 aa12.01□□□□□ -0.49
PPFIA3-207ENST00000602716 DEFB131BA0A096LNP1 70 aa12.01□□□□□ -0.49
PPFIA3-207ENST00000602716 CEMP1Q6PRD7 247 aaPredicted RBP12.01□□□□□ -0.49
PPFIA3-207ENST00000602716 SIGMAR1Q99720 223 aa12.01□□□□□ -0.49
PPFIA3-207ENST00000602716 IGHV3-30-3P0DP02 117 aa12.01□□□□□ -0.49
PPFIA3-207ENST00000602716 GTSF1LQ9H1H1 148 aa12.01□□□□□ -0.49
PPFIA3-207ENST00000602716 A0A0J9YXY3 114 aa12□□□□□ -0.49
PPFIA3-207ENST00000602716 TIMM21Q9BVV7 248 aa12□□□□□ -0.49
PPFIA3-207ENST00000602716 SPANXA1Q9NS26 97 aa12□□□□□ -0.49
PPFIA3-207ENST00000602716 FOXI1Q12951 378 aa11.99□□□□□ -0.49
PPFIA3-207ENST00000602716 MUSTN1Q8IVN3 82 aa11.99□□□□□ -0.49
PPFIA3-207ENST00000602716 A0A0B4J2C4 111 aa11.99□□□□□ -0.49
PPFIA3-207ENST00000602716 IGHV3-33P01772 117 aa11.99□□□□□ -0.49
PPFIA3-207ENST00000602716 UBE2D4Q9Y2X8 147 aa11.99□□□□□ -0.49
PPFIA3-207ENST00000602716 RNASE13Q5GAN3 156 aaKnown RBP11.98□□□□□ -0.49
PPFIA3-207ENST00000602716 TINCRA0A1B0GVN0 87 aa11.98□□□□□ -0.49
PPFIA3-207ENST00000602716 LITAFQ99732 161 aa11.98□□□□□ -0.49
PPFIA3-207ENST00000602716 ICOSQ9Y6W8 199 aa11.98□□□□□ -0.49
PPFIA3-207ENST00000602716 IGHV1-58A0A0C4DH39 117 aa11.97□□□□□ -0.49
PPFIA3-207ENST00000602716 TRBV6-8A0A0A6YYG3 113 aa11.96□□□□□ -0.49
PPFIA3-207ENST00000602716 TRAV8-3A0A0A6YYJ7 113 aa11.96□□□□□ -0.49
PPFIA3-207ENST00000602716 A0A1B0GV72 72 aa11.96□□□□□ -0.49
PPFIA3-207ENST00000602716 NHLRC4P0CG21 123 aaPredicted RBP11.96□□□□□ -0.49
PPFIA3-207ENST00000602716 SCGB1C2P0DMR2 95 aa11.96□□□□□ -0.49
PPFIA3-207ENST00000602716 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.96□□□□□ -0.5
PPFIA3-207ENST00000602716 TRAV10A0A0B4J240 114 aa11.96□□□□□ -0.5
PPFIA3-207ENST00000602716 MRPL23Q16540 153 aaKnown RBP11.96□□□□□ -0.5
PPFIA3-207ENST00000602716 Q6ZUT4 128 aa11.95□□□□□ -0.5
PPFIA3-207ENST00000602716 TEN1Q86WV5 123 aa11.95□□□□□ -0.5
PPFIA3-207ENST00000602716 TMEM243Q9BU79 118 aa11.95□□□□□ -0.5
PPFIA3-207ENST00000602716 ERG28Q9UKR5 140 aa11.95□□□□□ -0.5
PPFIA3-207ENST00000602716 SMAGPQ0VAQ4 97 aa11.94□□□□□ -0.5
PPFIA3-207ENST00000602716 GAGE6Q13070 117 aa11.94□□□□□ -0.5
PPFIA3-207ENST00000602716 Q8N3U1 123 aa11.93□□□□□ -0.5
PPFIA3-207ENST00000602716 PPDPFLQ8WWR9 84 aa11.93□□□□□ -0.5
PPFIA3-207ENST00000602716 CARD19Q96LW7 228 aa11.93□□□□□ -0.5
PPFIA3-207ENST00000602716 NDUFA12Q9UI09 145 aa11.93□□□□□ -0.5
PPFIA3-207ENST00000602716 H3BNG1 76 aa11.93□□□□□ -0.5
PPFIA3-207ENST00000602716 SPINK8P0C7L1 97 aa11.92□□□□□ -0.5
PPFIA3-207ENST00000602716 SPANXDQ9BXN6 97 aa11.92□□□□□ -0.5
PPFIA3-207ENST00000602716 SPANXCQ9NY87 97 aa11.92□□□□□ -0.5
PPFIA3-207ENST00000602716 H7C2G1 150 aa11.91□□□□□ -0.5
PPFIA3-207ENST00000602716 ADAMTSL4-AS1Q5T5F5 129 aa11.91□□□□□ -0.5
PPFIA3-207ENST00000602716 CHCHD5Q9BSY4 110 aa11.91□□□□□ -0.5
PPFIA3-207ENST00000602716 CDIP1Q9H305 208 aa11.91□□□□□ -0.5
PPFIA3-207ENST00000602716 M0QXV9 152 aa11.9□□□□□ -0.5
PPFIA3-207ENST00000602716 ZFAND6Q6FIF0 208 aa11.9□□□□□ -0.5
PPFIA3-207ENST00000602716 MIAQ16674 131 aa11.89□□□□□ -0.51
PPFIA3-207ENST00000602716 LYPD5Q6UWN5 251 aa11.89□□□□□ -0.51
PPFIA3-207ENST00000602716 ANKRD29Q8N6D5 301 aa11.89□□□□□ -0.51
PPFIA3-207ENST00000602716 GEMIN7Q9H840 131 aaKnown RBP11.89□□□□□ -0.51
PPFIA3-207ENST00000602716 IGLV4-60A0A075B6I1 120 aa11.89□□□□□ -0.51
PPFIA3-207ENST00000602716 IGLV5-45A0A087WSX0 123 aa11.89□□□□□ -0.51
PPFIA3-207ENST00000602716 UBE2L6O14933 153 aa11.89□□□□□ -0.51
PPFIA3-207ENST00000602716 TIRAPP58753 221 aa11.89□□□□□ -0.51
PPFIA3-207ENST00000602716 PRSS2P07478 247 aa11.88□□□□□ -0.51
PPFIA3-207ENST00000602716 Q1RN00 199 aa11.88□□□□□ -0.51
PPFIA3-207ENST00000602716 DYNC2H1Q8NCM8 4307 aaKnown RBP11.88□□□□□ -0.51
PPFIA3-207ENST00000602716 TRBV30A0A0K0K1B3 111 aa11.87□□□□□ -0.51
PPFIA3-207ENST00000602716 SLC25A20O43772 301 aa11.87□□□□□ -0.51
PPFIA3-207ENST00000602716 ESRGQ1W209 222 aa11.87□□□□□ -0.51
PPFIA3-207ENST00000602716 CDKN2A-AS1Q9UH64 79 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms