RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.95□□□□□ -0.66
SHKBP1-227ENST00000602011 MRPL35Q9NZE8 188 aaKnown RBP10.95□□□□□ -0.66
SHKBP1-227ENST00000602011 PSORS1C2Q9UIG4 136 aa10.95□□□□□ -0.66
SHKBP1-227ENST00000602011 LPAP08519 4548 aa10.94□□□□□ -0.66
SHKBP1-227ENST00000602011 FAM104BQ5XKR9 115 aa10.94□□□□□ -0.66
SHKBP1-227ENST00000602011 C5orf38Q86SI9 138 aa10.94□□□□□ -0.66
SHKBP1-227ENST00000602011 V9GYV3 84 aa10.94□□□□□ -0.66
SHKBP1-227ENST00000602011 RPL18AQ02543 176 aaKnown RBP10.93□□□□□ -0.66
SHKBP1-227ENST00000602011 SPAG11BQ08648 103 aa10.93□□□□□ -0.66
SHKBP1-227ENST00000602011 DIRC1Q969H9 104 aa10.93□□□□□ -0.66
SHKBP1-227ENST00000602011 SMKR1H3BMG3 65 aa10.92□□□□□ -0.66
SHKBP1-227ENST00000602011 MT-ND4LP03901 98 aa10.92□□□□□ -0.66
SHKBP1-227ENST00000602011 C1orf137Q5JT78 98 aa10.92□□□□□ -0.66
SHKBP1-227ENST00000602011 ANAPC16Q96DE5 110 aa10.92□□□□□ -0.66
SHKBP1-227ENST00000602011 SPANXA1Q9NS26 97 aa10.92□□□□□ -0.66
SHKBP1-227ENST00000602011 NDUFA1O15239 70 aa10.91□□□□□ -0.66
SHKBP1-227ENST00000602011 S100A8P05109 93 aa10.91□□□□□ -0.66
SHKBP1-227ENST00000602011 TLX1NBP0CAT3 122 aa10.91□□□□□ -0.66
SHKBP1-227ENST00000602011 CKS2P33552 79 aa10.91□□□□□ -0.66
SHKBP1-227ENST00000602011 MRPS36P82909 103 aaKnown RBP10.91□□□□□ -0.66
SHKBP1-227ENST00000602011 MRPL51Q4U2R6 128 aaKnown RBP10.91□□□□□ -0.66
SHKBP1-227ENST00000602011 C10orf91Q5T1B1 145 aa10.91□□□□□ -0.66
SHKBP1-227ENST00000602011 IGHV3OR16-9A0A0B4J2B5 98 aa10.9□□□□□ -0.66
SHKBP1-227ENST00000602011 NDUFA5Q16718 116 aa10.9□□□□□ -0.66
SHKBP1-227ENST00000602011 Q6ZUT4 128 aa10.9□□□□□ -0.66
SHKBP1-227ENST00000602011 ADCYAP1P18509 176 aa10.89□□□□□ -0.67
SHKBP1-227ENST00000602011 RNASE13Q5GAN3 156 aaKnown RBP10.89□□□□□ -0.67
SHKBP1-227ENST00000602011 OPRPNQ99935 248 aaPredicted RBP10.89□□□□□ -0.67
SHKBP1-227ENST00000602011 SMIM27A0A1W2PRY6 76 aa10.88□□□□□ -0.67
SHKBP1-227ENST00000602011 PPBPP02775 128 aa10.88□□□□□ -0.67
SHKBP1-227ENST00000602011 IGLV7-43P04211 117 aa10.88□□□□□ -0.67
SHKBP1-227ENST00000602011 PHF5AQ7RTV0 110 aaKnown RBP10.88□□□□□ -0.67
SHKBP1-227ENST00000602011 ORAOV1Q8WV07 137 aa10.88□□□□□ -0.67
SHKBP1-227ENST00000602011 CARHSP1Q9Y2V2 147 aaKnown RBP10.88□□□□□ -0.67
SHKBP1-227ENST00000602011 TNFRSF6BO95407 300 aa10.87□□□□□ -0.67
SHKBP1-227ENST00000602011 HBBP68871 147 aa10.87□□□□□ -0.67
SHKBP1-227ENST00000602011 CTDSP1Q9GZU7 261 aa10.87□□□□□ -0.67
SHKBP1-227ENST00000602011 A0A087WZ39 114 aa10.86□□□□□ -0.67
SHKBP1-227ENST00000602011 SMIM2Q9BVW6 85 aa10.86□□□□□ -0.67
SHKBP1-227ENST00000602011 IGLV1-50A0A075B6I6 118 aa10.84□□□□□ -0.67
SHKBP1-227ENST00000602011 TGIF2-C20orf24A0A0A6YYL0 155 aa10.84□□□□□ -0.67
SHKBP1-227ENST00000602011 H0Y9J4 135 aa10.84□□□□□ -0.67
SHKBP1-227ENST00000602011 IFITM10A6NMD0 228 aa10.83□□□□□ -0.68
SHKBP1-227ENST00000602011 RAB5AP20339 215 aa10.83□□□□□ -0.68
SHKBP1-227ENST00000602011 RPL39P62891 51 aaKnown RBP10.83□□□□□ -0.68
SHKBP1-227ENST00000602011 PYGO1Q9Y3Y4 419 aa10.83□□□□□ -0.68
SHKBP1-227ENST00000602011 TRBV30A0A0K0K1B3 111 aa10.82□□□□□ -0.68
SHKBP1-227ENST00000602011 IFI27P40305 119 aaPredicted RBP10.82□□□□□ -0.68
SHKBP1-227ENST00000602011 RHEBQ15382 184 aa10.82□□□□□ -0.68
SHKBP1-227ENST00000602011 LINC01561Q8N1V8 128 aa10.82□□□□□ -0.68
SHKBP1-227ENST00000602011 SVBPQ8N300 66 aa10.82□□□□□ -0.68
SHKBP1-227ENST00000602011 FAM104AQ969W3 186 aa10.82□□□□□ -0.68
SHKBP1-227ENST00000602011 D6R8Y8 96 aa10.81□□□□□ -0.68
SHKBP1-227ENST00000602011 SNAPINO95295 136 aa10.81□□□□□ -0.68
SHKBP1-227ENST00000602011 APOC3P02656 99 aa10.81□□□□□ -0.68
SHKBP1-227ENST00000602011 UNQ6190/PRO20217Q6UXQ8 127 aa10.81□□□□□ -0.68
SHKBP1-227ENST00000602011 SLC7A5P1Q8MH63 180 aa10.81□□□□□ -0.68
SHKBP1-227ENST00000602011 ATP5L2Q7Z4Y8 100 aa10.8□□□□□ -0.68
SHKBP1-227ENST00000602011 PRR26Q8N8Z3 221 aa10.8□□□□□ -0.68
SHKBP1-227ENST00000602011 C6orf48Q9UBA6 75 aa10.8□□□□□ -0.68
SHKBP1-227ENST00000602011 RPL13AP40429 203 aaKnown RBP10.79□□□□□ -0.68
SHKBP1-227ENST00000602011 C10orf25Q5T742 122 aa10.79□□□□□ -0.68
SHKBP1-227ENST00000602011 ORMDL3Q8N138 153 aa10.79□□□□□ -0.68
SHKBP1-227ENST00000602011 PACRGQ96M98 296 aaPredicted RBP10.79□□□□□ -0.68
SHKBP1-227ENST00000602011 NDUFC2-KCTD14E9PQ53 114 aa10.78□□□□□ -0.68
SHKBP1-227ENST00000602011 S100PP25815 95 aa10.78□□□□□ -0.68
SHKBP1-227ENST00000602011 KIAA0087Q14695 138 aa10.78□□□□□ -0.68
SHKBP1-227ENST00000602011 GAGE2EQ4V326 116 aa10.78□□□□□ -0.68
SHKBP1-227ENST00000602011 RPS10P5Q9NQ39 176 aa10.78□□□□□ -0.68
SHKBP1-227ENST00000602011 GAGE2DQ9UEU5 116 aa10.78□□□□□ -0.68
SHKBP1-227ENST00000602011 TRAV9-1A0A075B6T8 112 aa10.77□□□□□ -0.69
SHKBP1-227ENST00000602011 A0A1B0GXF2 115 aa10.77□□□□□ -0.69
SHKBP1-227ENST00000602011 PRSS47A8MTI9 375 aa10.77□□□□□ -0.69
SHKBP1-227ENST00000602011 NPYP01303 97 aa10.77□□□□□ -0.69
SHKBP1-227ENST00000602011 UBE2BP63146 152 aa10.77□□□□□ -0.69
SHKBP1-227ENST00000602011 TMEM136Q6ZRR5 245 aa10.77□□□□□ -0.69
SHKBP1-227ENST00000602011 LAMTOR2Q9Y2Q5 125 aa10.77□□□□□ -0.69
SHKBP1-227ENST00000602011 FAM168BA1KXE4 195 aa10.76□□□□□ -0.69
SHKBP1-227ENST00000602011 LINC00242Q5T6M2 205 aa10.76□□□□□ -0.69
SHKBP1-227ENST00000602011 MRPL54Q6P161 138 aaKnown RBP10.76□□□□□ -0.69
SHKBP1-227ENST00000602011 FAM19A5Q7Z5A7 132 aaPredicted RBP10.76□□□□□ -0.69
SHKBP1-227ENST00000602011 TMEM141Q96I45 108 aa10.76□□□□□ -0.69
SHKBP1-227ENST00000602011 M0QXV9 152 aa10.75□□□□□ -0.69
SHKBP1-227ENST00000602011 NPSP0C0P6 89 aa10.75□□□□□ -0.69
SHKBP1-227ENST00000602011 UBE2D1P51668 147 aa10.75□□□□□ -0.69
SHKBP1-227ENST00000602011 TEX43Q6ZNM6 134 aa10.75□□□□□ -0.69
SHKBP1-227ENST00000602011 C2orf88Q9BSF0 95 aa10.75□□□□□ -0.69
SHKBP1-227ENST00000602011 PRELID3AQ96N28 172 aa10.74□□□□□ -0.69
SHKBP1-227ENST00000602011 IGLV4-3A0A075B6K6 122 aa10.73□□□□□ -0.69
SHKBP1-227ENST00000602011 Q6ZN92 141 aa10.73□□□□□ -0.69
SHKBP1-227ENST00000602011 K7EMI3 77 aa10.72□□□□□ -0.69
SHKBP1-227ENST00000602011 PRSS2P07478 247 aa10.72□□□□□ -0.69
SHKBP1-227ENST00000602011 KRTAP1-4P0C5Y4 121 aa10.72□□□□□ -0.69
SHKBP1-227ENST00000602011 COX19Q49B96 90 aa10.72□□□□□ -0.69
SHKBP1-227ENST00000602011 LBHQ53QV2 105 aaPredicted RBP10.72□□□□□ -0.69
SHKBP1-227ENST00000602011 KRTAP11-1Q8IUC1 163 aa10.72□□□□□ -0.69
SHKBP1-227ENST00000602011 MUC2Q02817 5179 aa10.71□□□□□ -0.69
SHKBP1-227ENST00000602011 NUPR1O60356 82 aa10.71□□□□□ -0.69
SHKBP1-227ENST00000602011 G0S2P27469 103 aa10.71□□□□□ -0.69
SHKBP1-227ENST00000602011 SEC11AP67812 179 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms