RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 OPRPNQ99935 248 aaPredicted RBP10.92□□□□□ -0.66
HERC3-214ENST00000601319 PLAC8Q9NZF1 115 aa10.92□□□□□ -0.66
HERC3-214ENST00000601319 IGLV4-3A0A075B6K6 122 aa10.91□□□□□ -0.66
HERC3-214ENST00000601319 IGHV3OR16-9A0A0B4J2B5 98 aa10.91□□□□□ -0.66
HERC3-214ENST00000601319 RPL37AP61513 92 aaKnown RBP10.91□□□□□ -0.66
HERC3-214ENST00000601319 SYCNQ0VAF6 134 aa10.91□□□□□ -0.66
HERC3-214ENST00000601319 RHEBQ15382 184 aa10.91□□□□□ -0.66
HERC3-214ENST00000601319 LINC00526Q96FQ7 95 aa10.91□□□□□ -0.66
HERC3-214ENST00000601319 CYSLTR1Q9Y271 337 aa10.91□□□□□ -0.66
HERC3-214ENST00000601319 IGLV4-69A0A075B6H9 119 aa10.9□□□□□ -0.66
HERC3-214ENST00000601319 NPSP0C0P6 89 aa10.9□□□□□ -0.66
HERC3-214ENST00000601319 C5orf38Q86SI9 138 aa10.9□□□□□ -0.66
HERC3-214ENST00000601319 OR10D4PQ8NGN7 298 aa10.9□□□□□ -0.66
HERC3-214ENST00000601319 TMEM141Q96I45 108 aa10.9□□□□□ -0.66
HERC3-214ENST00000601319 C2orf48Q96LS8 159 aa10.9□□□□□ -0.66
HERC3-214ENST00000601319 GNB1LQ9BYB4 327 aa10.9□□□□□ -0.66
HERC3-214ENST00000601319 LINC00474Q9P2X8 69 aa10.9□□□□□ -0.66
HERC3-214ENST00000601319 A0A096LNI7 61 aa10.89□□□□□ -0.67
HERC3-214ENST00000601319 COX19Q49B96 90 aa10.89□□□□□ -0.67
HERC3-214ENST00000601319 C2orf66Q6UXQ4 117 aa10.89□□□□□ -0.67
HERC3-214ENST00000601319 HERC1Q15751 4861 aa10.87□□□□□ -0.67
HERC3-214ENST00000601319 IGKV2-24A0A0C4DH68 120 aa10.87□□□□□ -0.67
HERC3-214ENST00000601319 MT-ND6P03923 174 aa10.87□□□□□ -0.67
HERC3-214ENST00000601319 G0S2P27469 103 aa10.87□□□□□ -0.67
HERC3-214ENST00000601319 SPAG11BQ08648 103 aa10.87□□□□□ -0.67
HERC3-214ENST00000601319 TEX43Q6ZNM6 134 aa10.87□□□□□ -0.67
HERC3-214ENST00000601319 Q6ZRU5 148 aa10.87□□□□□ -0.67
HERC3-214ENST00000601319 DPH3Q96FX2 82 aa10.87□□□□□ -0.67
HERC3-214ENST00000601319 PKHD1L1Q86WI1 4243 aa10.87□□□□□ -0.67
HERC3-214ENST00000601319 TGIF2-C20orf24A0A0A6YYL0 155 aa10.86□□□□□ -0.67
HERC3-214ENST00000601319 F8WDY8 70 aa10.86□□□□□ -0.67
HERC3-214ENST00000601319 MAJINQ3KP22 176 aa10.86□□□□□ -0.67
HERC3-214ENST00000601319 Q6ZN92 141 aa10.86□□□□□ -0.67
HERC3-214ENST00000601319 CAMK2N2Q96S95 79 aa10.86□□□□□ -0.67
HERC3-214ENST00000601319 IGIPA6NJ69 53 aa10.85□□□□□ -0.67
HERC3-214ENST00000601319 KRTAP29-1A8MX34 341 aaPredicted RBP10.85□□□□□ -0.67
HERC3-214ENST00000601319 KIAA1644Q3SXP7 199 aa10.85□□□□□ -0.67
HERC3-214ENST00000601319 LINC00242Q5T6M2 205 aa10.85□□□□□ -0.67
HERC3-214ENST00000601319 LINC00173Q6ZV60 143 aa10.85□□□□□ -0.67
HERC3-214ENST00000601319 AMELXQ99217 191 aa10.85□□□□□ -0.67
HERC3-214ENST00000601319 C2orf88Q9BSF0 95 aa10.85□□□□□ -0.67
HERC3-214ENST00000601319 A0A087WZ39 114 aa10.84□□□□□ -0.67
HERC3-214ENST00000601319 LOC107984640A0A0U1RRK4 108 aa10.84□□□□□ -0.67
HERC3-214ENST00000601319 UBE2D1P51668 147 aa10.84□□□□□ -0.67
HERC3-214ENST00000601319 STPG4Q8N801 248 aa10.84□□□□□ -0.67
HERC3-214ENST00000601319 ORAOV1Q8WV07 137 aa10.84□□□□□ -0.67
HERC3-214ENST00000601319 RPS10P5Q9NQ39 176 aa10.84□□□□□ -0.67
HERC3-214ENST00000601319 PTTG1IPP53801 180 aa10.83□□□□□ -0.68
HERC3-214ENST00000601319 RNF151Q2KHN1 245 aa10.83□□□□□ -0.68
HERC3-214ENST00000601319 C7orf33Q8WU49 177 aa10.83□□□□□ -0.68
HERC3-214ENST00000601319 TIMM17AQ99595 171 aa10.83□□□□□ -0.68
HERC3-214ENST00000601319 ALKBH7Q9BT30 221 aaPredicted RBP10.83□□□□□ -0.68
HERC3-214ENST00000601319 LINC01546A6NGU7 62 aa10.82□□□□□ -0.68
HERC3-214ENST00000601319 PAPPA-AS1Q5QFB9 102 aa10.82□□□□□ -0.68
HERC3-214ENST00000601319 FAM19A3Q7Z5A8 133 aa10.82□□□□□ -0.68
HERC3-214ENST00000601319 LINC01561Q8N1V8 128 aa10.82□□□□□ -0.68
HERC3-214ENST00000601319 TOMM6Q96B49 74 aa10.82□□□□□ -0.68
HERC3-214ENST00000601319 VCX2Q9H322 139 aa10.82□□□□□ -0.68
HERC3-214ENST00000601319 MRPL35Q9NZE8 188 aaKnown RBP10.82□□□□□ -0.68
HERC3-214ENST00000601319 LINC01549A6NIU2 74 aa10.81□□□□□ -0.68
HERC3-214ENST00000601319 MRPL18Q9H0U6 180 aaKnown RBP10.81□□□□□ -0.68
HERC3-214ENST00000601319 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.8□□□□□ -0.68
HERC3-214ENST00000601319 NDUFA1O15239 70 aa10.8□□□□□ -0.68
HERC3-214ENST00000601319 HNRNPA3P51991 378 aaKnown RBP10.8□□□□□ -0.68
HERC3-214ENST00000601319 NDUFA5Q16718 116 aa10.8□□□□□ -0.68
HERC3-214ENST00000601319 J3QL48 77 aa10.79□□□□□ -0.68
HERC3-214ENST00000601319 OXTP01178 125 aa10.79□□□□□ -0.68
HERC3-214ENST00000601319 ERASQ7Z444 233 aa10.79□□□□□ -0.68
HERC3-214ENST00000601319 SVBPQ8N300 66 aa10.79□□□□□ -0.68
HERC3-214ENST00000601319 SNAPINO95295 136 aa10.78□□□□□ -0.68
HERC3-214ENST00000601319 APOC3P02656 99 aa10.78□□□□□ -0.68
HERC3-214ENST00000601319 SEC11AP67812 179 aa10.78□□□□□ -0.68
HERC3-214ENST00000601319 KIAA0087Q14695 138 aa10.78□□□□□ -0.68
HERC3-214ENST00000601319 ZC2HC1BQ5TFG8 222 aa10.78□□□□□ -0.68
HERC3-214ENST00000601319 LRP1Q07954 4544 aaKnown RBP10.77□□□□□ -0.69
HERC3-214ENST00000601319 FABP9Q0Z7S8 132 aa10.77□□□□□ -0.69
HERC3-214ENST00000601319 TLX1NBP0CAT3 122 aa10.76□□□□□ -0.69
HERC3-214ENST00000601319 GAGE2BQ13066 116 aa10.76□□□□□ -0.69
HERC3-214ENST00000601319 HERVK_113P63121 156 aa10.75□□□□□ -0.69
HERC3-214ENST00000601319 PRR3P79522 188 aaKnown RBP10.75□□□□□ -0.69
HERC3-214ENST00000601319 RPL18AQ02543 176 aaKnown RBP10.75□□□□□ -0.69
HERC3-214ENST00000601319 C10orf25Q5T742 122 aa10.75□□□□□ -0.69
HERC3-214ENST00000601319 SCGB3A1Q96QR1 104 aa10.75□□□□□ -0.69
HERC3-214ENST00000601319 C6orf48Q9UBA6 75 aa10.75□□□□□ -0.69
HERC3-214ENST00000601319 FAT3Q8TDW7 4589 aa10.74□□□□□ -0.69
HERC3-214ENST00000601319 A0A0J9YXV3 536 aa10.74□□□□□ -0.69
HERC3-214ENST00000601319 UNQ6190/PRO20217Q6UXQ8 127 aa10.74□□□□□ -0.69
HERC3-214ENST00000601319 FA2HQ7L5A8 372 aa10.74□□□□□ -0.69
HERC3-214ENST00000601319 SMCO4Q9NRQ5 59 aa10.74□□□□□ -0.69
HERC3-214ENST00000601319 TRBV30A0A0K0K1B3 111 aa10.73□□□□□ -0.69
HERC3-214ENST00000601319 TRAPPC1Q9Y5R8 145 aa10.73□□□□□ -0.69
HERC3-214ENST00000601319 SMCPP49901 116 aaPredicted RBP10.72□□□□□ -0.69
HERC3-214ENST00000601319 LCE2AQ5TA79 106 aaPredicted RBP10.72□□□□□ -0.69
HERC3-214ENST00000601319 GEMIN7Q9H840 131 aaKnown RBP10.72□□□□□ -0.69
HERC3-214ENST00000601319 Q8IZM0 81 aa10.71□□□□□ -0.69
HERC3-214ENST00000601319 C18orf32Q8TCD1 76 aa10.71□□□□□ -0.69
HERC3-214ENST00000601319 CDKN2A-AS1Q9UH64 79 aa10.71□□□□□ -0.69
HERC3-214ENST00000601319 IGLV5-45A0A087WSX0 123 aa10.7□□□□□ -0.7
HERC3-214ENST00000601319 A0A1W2PNN7 141 aa10.7□□□□□ -0.7
HERC3-214ENST00000601319 C9orf116Q5BN46 136 aaPredicted RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms