RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 COX6A2Q02221 97 aa13.61□□□□□ -0.23
PNKP-215ENST00000600910 FOXI1Q12951 378 aa13.6□□□□□ -0.23
PNKP-215ENST00000600910 ODF1Q14990 250 aa13.6□□□□□ -0.23
PNKP-215ENST00000600910 IGLV4-69A0A075B6H9 119 aa13.59□□□□□ -0.23
PNKP-215ENST00000600910 TINCRA0A1B0GVN0 87 aa13.59□□□□□ -0.23
PNKP-215ENST00000600910 SEC11AP67812 179 aa13.59□□□□□ -0.23
PNKP-215ENST00000600910 MAPKAPK5-AS1Q8N8E1 139 aa13.59□□□□□ -0.23
PNKP-215ENST00000600910 MRPL35Q9NZE8 188 aaKnown RBP13.59□□□□□ -0.23
PNKP-215ENST00000600910 F8VRH5 84 aa13.58□□□□□ -0.24
PNKP-215ENST00000600910 IGLC3P0DOY3 106 aa13.58□□□□□ -0.24
PNKP-215ENST00000600910 HERVK_113P63121 156 aa13.58□□□□□ -0.24
PNKP-215ENST00000600910 SPATA12Q7Z6I5 190 aa13.58□□□□□ -0.24
PNKP-215ENST00000600910 GEMIN7Q9H840 131 aaKnown RBP13.58□□□□□ -0.24
PNKP-215ENST00000600910 IGHV3OR16-9A0A0B4J2B5 98 aa13.57□□□□□ -0.24
PNKP-215ENST00000600910 CHAC1Q9BUX1 264 aa13.57□□□□□ -0.24
PNKP-215ENST00000600910 PET117Q6UWS5 81 aa13.57□□□□□ -0.24
PNKP-215ENST00000600910 PMCHL2Q9BQD1 86 aa13.57□□□□□ -0.24
PNKP-215ENST00000600910 RTL8CO15255 209 aa13.56□□□□□ -0.24
PNKP-215ENST00000600910 C5orf38Q86SI9 138 aa13.56□□□□□ -0.24
PNKP-215ENST00000600910 C11orf86A6NJI1 115 aa13.55□□□□□ -0.24
PNKP-215ENST00000600910 CDKN2A-AS1Q9UH64 79 aa13.55□□□□□ -0.24
PNKP-215ENST00000600910 FRAS1Q86XX4 4008 aa13.55□□□□□ -0.24
PNKP-215ENST00000600910 COX7A2LO14548 114 aa13.54□□□□□ -0.24
PNKP-215ENST00000600910 LINC00469Q8N7U9 141 aa13.54□□□□□ -0.24
PNKP-215ENST00000600910 OR10D4PQ8NGN7 298 aa13.54□□□□□ -0.24
PNKP-215ENST00000600910 LINC01545Q5VT33 79 aa13.53□□□□□ -0.24
PNKP-215ENST00000600910 RYR3Q15413 4870 aa13.53□□□□□ -0.24
PNKP-215ENST00000600910 IGLV5-45A0A087WSX0 123 aa13.53□□□□□ -0.24
PNKP-215ENST00000600910 A0A087WZ39 114 aa13.52□□□□□ -0.25
PNKP-215ENST00000600910 LECT2O14960 151 aa13.52□□□□□ -0.25
PNKP-215ENST00000600910 MALP21145 153 aa13.52□□□□□ -0.25
PNKP-215ENST00000600910 DPM2O94777 84 aa13.51□□□□□ -0.25
PNKP-215ENST00000600910 ZNF22P17026 224 aaPredicted RBP13.51□□□□□ -0.25
PNKP-215ENST00000600910 PLNP26678 52 aa13.51□□□□□ -0.25
PNKP-215ENST00000600910 DNAH17Q9UFH2 4485 aa13.5□□□□□ -0.25
PNKP-215ENST00000600910 IGKCP01834 107 aa13.5□□□□□ -0.25
PNKP-215ENST00000600910 WFDC2Q14508 124 aa13.5□□□□□ -0.25
PNKP-215ENST00000600910 TMEM170BQ5T4T1 132 aa13.5□□□□□ -0.25
PNKP-215ENST00000600910 C20orf202A1L168 122 aa13.5□□□□□ -0.25
PNKP-215ENST00000600910 LRCOL1A6NCL2 159 aa13.5□□□□□ -0.25
PNKP-215ENST00000600910 USP17L23D6RBM5 183 aa13.49□□□□□ -0.25
PNKP-215ENST00000600910 TNP2Q05952 138 aa13.49□□□□□ -0.25
PNKP-215ENST00000600910 C15orf56Q8N910 161 aa13.48□□□□□ -0.25
PNKP-215ENST00000600910 H3BRM9 83 aa13.47□□□□□ -0.25
PNKP-215ENST00000600910 CFAP161Q6P656 301 aa13.47□□□□□ -0.25
PNKP-215ENST00000600910 LINC01561Q8N1V8 128 aa13.47□□□□□ -0.25
PNKP-215ENST00000600910 A0A087WTM6 91 aa13.46□□□□□ -0.25
PNKP-215ENST00000600910 IGHV1-58A0A0C4DH39 117 aa13.46□□□□□ -0.25
PNKP-215ENST00000600910 APOMO95445 188 aa13.46□□□□□ -0.25
PNKP-215ENST00000600910 SPINK8P0C7L1 97 aa13.46□□□□□ -0.25
PNKP-215ENST00000600910 SMIM1B2RUZ4 78 aa13.46□□□□□ -0.26
PNKP-215ENST00000600910 IGHV3-64A0A075B6Q5 118 aa13.45□□□□□ -0.26
PNKP-215ENST00000600910 HIGD2BQ4VC39 106 aa13.45□□□□□ -0.26
PNKP-215ENST00000600910 ORAOV1Q8WV07 137 aa13.45□□□□□ -0.26
PNKP-215ENST00000600910 FAT2Q9NYQ8 4349 aa13.44□□□□□ -0.26
PNKP-215ENST00000600910 TMEM223A0PJW6 202 aa13.43□□□□□ -0.26
PNKP-215ENST00000600910 SCGB1D1O95968 90 aa13.43□□□□□ -0.26
PNKP-215ENST00000600910 LINC00336Q6ZUF6 198 aa13.43□□□□□ -0.26
PNKP-215ENST00000600910 ATOH7Q8N100 152 aa13.42□□□□□ -0.26
PNKP-215ENST00000600910 GVQW2A0A096LPI5 108 aaPredicted RBP13.42□□□□□ -0.26
PNKP-215ENST00000600910 hDV102S1A0JD36 115 aa13.42□□□□□ -0.26
PNKP-215ENST00000600910 C14orf177Q52M58 125 aa13.42□□□□□ -0.26
PNKP-215ENST00000600910 SPAG11BQ08648 103 aa13.41□□□□□ -0.26
PNKP-215ENST00000600910 Q8N814 137 aa13.41□□□□□ -0.26
PNKP-215ENST00000600910 LINC00526Q96FQ7 95 aa13.41□□□□□ -0.26
PNKP-215ENST00000600910 ZNF561-AS1K7EIQ3 104 aa13.4□□□□□ -0.26
PNKP-215ENST00000600910 AKR1D1P51857 326 aa13.4□□□□□ -0.26
PNKP-215ENST00000600910 TOMM7Q9P0U1 55 aa13.4□□□□□ -0.26
PNKP-215ENST00000600910 IGLV5-39A0A0G2JS06 123 aa13.39□□□□□ -0.27
PNKP-215ENST00000600910 EREGO14944 169 aa13.39□□□□□ -0.27
PNKP-215ENST00000600910 JOSD1Q15040 202 aaPredicted RBP13.39□□□□□ -0.27
PNKP-215ENST00000600910 STPG4Q8N801 248 aa13.39□□□□□ -0.27
PNKP-215ENST00000600910 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.38□□□□□ -0.27
PNKP-215ENST00000600910 PRSS2P07478 247 aa13.38□□□□□ -0.27
PNKP-215ENST00000600910 HERVK_113P61574 105 aa13.38□□□□□ -0.27
PNKP-215ENST00000600910 KIAA0087Q14695 138 aa13.38□□□□□ -0.27
PNKP-215ENST00000600910 Q8IZM0 81 aa13.37□□□□□ -0.27
PNKP-215ENST00000600910 COX7B2Q8TF08 81 aa13.37□□□□□ -0.27
PNKP-215ENST00000600910 C6orf226Q5I0X4 101 aa13.35□□□□□ -0.27
PNKP-215ENST00000600910 NTN5Q8WTR8 489 aaPredicted RBP13.35□□□□□ -0.27
PNKP-215ENST00000600910 PYY3Q5JQD4 70 aa13.35□□□□□ -0.27
PNKP-215ENST00000600910 SLPIP03973 132 aa13.34□□□□□ -0.27
PNKP-215ENST00000600910 MAJINQ3KP22 176 aa13.34□□□□□ -0.27
PNKP-215ENST00000600910 DNAH11Q96DT5 4516 aa13.33□□□□□ -0.28
PNKP-215ENST00000600910 LOC105371267A0A1B0GV96 52 aa13.33□□□□□ -0.28
PNKP-215ENST00000600910 E9PLD3 99 aa13.33□□□□□ -0.28
PNKP-215ENST00000600910 C2orf82Q6UX34 121 aa13.33□□□□□ -0.28
PNKP-215ENST00000600910 C2orf48Q96LS8 159 aa13.33□□□□□ -0.28
PNKP-215ENST00000600910 CAMK2N2Q96S95 79 aa13.33□□□□□ -0.28
PNKP-215ENST00000600910 LEPROTO15243 131 aa13.32□□□□□ -0.28
PNKP-215ENST00000600910 PKD1P98161 4303 aa13.32□□□□□ -0.28
PNKP-215ENST00000600910 FUSP35637 526 aaKnown RBP eCLIP13.31□□□□□ -0.28
PNKP-215ENST00000600910 CKS1BP61024 79 aa13.31□□□□□ -0.28
PNKP-215ENST00000600910 TSPEAR-AS2P59090 65 aa13.31□□□□□ -0.28
PNKP-215ENST00000600910 KRTAP10-2P60368 255 aa13.31□□□□□ -0.28
PNKP-215ENST00000600910 CNBPP62633 177 aaKnown RBP13.31□□□□□ -0.28
PNKP-215ENST00000600910 ANKRD39Q53RE8 183 aa13.31□□□□□ -0.28
PNKP-215ENST00000600910 PLEKHB2Q96CS7 222 aa13.31□□□□□ -0.28
PNKP-215ENST00000600910 NDUFA1O15239 70 aa13.3□□□□□ -0.28
PNKP-215ENST00000600910 SYCNQ0VAF6 134 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms