RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 COLCA2A8K830 154 aa8.46□□□□□ -1.06
SRRM1-223ENST00000600523 HSBP1O75506 76 aa8.46□□□□□ -1.06
SRRM1-223ENST00000600523 ATP5LO75964 103 aa8.46□□□□□ -1.06
SRRM1-223ENST00000600523 LINC00242Q5T6M2 205 aa8.46□□□□□ -1.06
SRRM1-223ENST00000600523 OR10D4PQ8NGN7 298 aa8.46□□□□□ -1.06
SRRM1-223ENST00000600523 FAM104AQ969W3 186 aa8.46□□□□□ -1.06
SRRM1-223ENST00000600523 PKHD1P08F94 4074 aa8.45□□□□□ -1.06
SRRM1-223ENST00000600523 DNAH11Q96DT5 4516 aa8.45□□□□□ -1.06
SRRM1-223ENST00000600523 S100A1P23297 94 aa8.45□□□□□ -1.06
SRRM1-223ENST00000600523 NDUFA6P56556 154 aa8.45□□□□□ -1.06
SRRM1-223ENST00000600523 PMVKQ15126 192 aa8.45□□□□□ -1.06
SRRM1-223ENST00000600523 LINC01620Q4KN68 170 aa8.45□□□□□ -1.06
SRRM1-223ENST00000600523 PACRGQ96M98 296 aaPredicted RBP8.45□□□□□ -1.06
SRRM1-223ENST00000600523 A0A087WZ39 114 aa8.44□□□□□ -1.06
SRRM1-223ENST00000600523 F8WDY8 70 aa8.44□□□□□ -1.06
SRRM1-223ENST00000600523 SPAG11BQ08648 103 aa8.44□□□□□ -1.06
SRRM1-223ENST00000600523 SYCNQ0VAF6 134 aa8.44□□□□□ -1.06
SRRM1-223ENST00000600523 LINC00173Q6ZV60 143 aa8.44□□□□□ -1.06
SRRM1-223ENST00000600523 LINC01561Q8N1V8 128 aa8.44□□□□□ -1.06
SRRM1-223ENST00000600523 ORAOV1Q8WV07 137 aa8.44□□□□□ -1.06
SRRM1-223ENST00000600523 DPH3Q96FX2 82 aa8.44□□□□□ -1.06
SRRM1-223ENST00000600523 CARD19Q96LW7 228 aa8.44□□□□□ -1.06
SRRM1-223ENST00000600523 CAMK2N2Q96S95 79 aa8.44□□□□□ -1.06
SRRM1-223ENST00000600523 ZC2HC1BQ5TFG8 222 aa8.43□□□□□ -1.06
SRRM1-223ENST00000600523 C2orf48Q96LS8 159 aa8.43□□□□□ -1.06
SRRM1-223ENST00000600523 CST9LQ9H4G1 147 aa8.43□□□□□ -1.06
SRRM1-223ENST00000600523 IGLV4-69A0A075B6H9 119 aa8.42□□□□□ -1.06
SRRM1-223ENST00000600523 SCO1O75880 301 aa8.42□□□□□ -1.06
SRRM1-223ENST00000600523 PRSS2P07478 247 aa8.42□□□□□ -1.06
SRRM1-223ENST00000600523 PMCHL1Q16048 86 aa8.42□□□□□ -1.06
SRRM1-223ENST00000600523 FAM19A3Q7Z5A8 133 aa8.42□□□□□ -1.06
SRRM1-223ENST00000600523 URB1-AS1Q96HZ7 61 aa8.42□□□□□ -1.06
SRRM1-223ENST00000600523 BIRC6Q9NR09 4857 aa8.42□□□□□ -1.06
SRRM1-223ENST00000600523 TINCRA0A1B0GVN0 87 aa8.41□□□□□ -1.06
SRRM1-223ENST00000600523 H3BRM9 83 aa8.41□□□□□ -1.06
SRRM1-223ENST00000600523 LINC00469Q8N7U9 141 aa8.41□□□□□ -1.06
SRRM1-223ENST00000600523 LINC00526Q96FQ7 95 aa8.41□□□□□ -1.06
SRRM1-223ENST00000600523 NDUFA1O15239 70 aa8.4□□□□□ -1.06
SRRM1-223ENST00000600523 SLPIP03973 132 aa8.4□□□□□ -1.06
SRRM1-223ENST00000600523 COX6A2Q02221 97 aa8.4□□□□□ -1.06
SRRM1-223ENST00000600523 PDZD11Q5EBL8 140 aa8.4□□□□□ -1.06
SRRM1-223ENST00000600523 Q6ZSA8 131 aa8.4□□□□□ -1.06
SRRM1-223ENST00000600523 CHAC1Q9BUX1 264 aa8.4□□□□□ -1.06
SRRM1-223ENST00000600523 LINC00474Q9P2X8 69 aa8.4□□□□□ -1.06
SRRM1-223ENST00000600523 DYNC1H1Q14204 4646 aaKnown RBP8.39□□□□□ -1.07
SRRM1-223ENST00000600523 A0A096LNJ9 63 aa8.39□□□□□ -1.07
SRRM1-223ENST00000600523 A0A0J9YXV3 536 aa8.39□□□□□ -1.07
SRRM1-223ENST00000600523 XGP55808 180 aa8.39□□□□□ -1.07
SRRM1-223ENST00000600523 CKS1BP61024 79 aa8.39□□□□□ -1.07
SRRM1-223ENST00000600523 SDIM1Q6ZPB5 146 aa8.39□□□□□ -1.07
SRRM1-223ENST00000600523 CDKN2A-AS1Q9UH64 79 aa8.39□□□□□ -1.07
SRRM1-223ENST00000600523 FAM229AH3BQW9 127 aa8.38□□□□□ -1.07
SRRM1-223ENST00000600523 C6orf226Q5I0X4 101 aa8.38□□□□□ -1.07
SRRM1-223ENST00000600523 IFI27L1Q96BM0 104 aa8.38□□□□□ -1.07
SRRM1-223ENST00000600523 FAM30AQ9NZY2 134 aa8.38□□□□□ -1.07
SRRM1-223ENST00000600523 TOMM7Q9P0U1 55 aa8.38□□□□□ -1.07
SRRM1-223ENST00000600523 LOC107984640A0A0U1RRK4 108 aa8.37□□□□□ -1.07
SRRM1-223ENST00000600523 ATP6V1G1O75348 118 aa8.37□□□□□ -1.07
SRRM1-223ENST00000600523 SERF1AO75920 110 aa8.37□□□□□ -1.07
SRRM1-223ENST00000600523 LEPROTL1O95214 131 aa8.37□□□□□ -1.07
SRRM1-223ENST00000600523 RNF151Q2KHN1 245 aa8.37□□□□□ -1.07
SRRM1-223ENST00000600523 Q8N1X5 172 aa8.37□□□□□ -1.07
SRRM1-223ENST00000600523 HSPB8Q9UJY1 196 aa8.37□□□□□ -1.07
SRRM1-223ENST00000600523 Q6ZRU5 148 aa8.36□□□□□ -1.07
SRRM1-223ENST00000600523 SCXQ7RTU7 201 aa8.36□□□□□ -1.07
SRRM1-223ENST00000600523 Q8IZM0 81 aa8.36□□□□□ -1.07
SRRM1-223ENST00000600523 FAM19A2Q8N3H0 131 aa8.36□□□□□ -1.07
SRRM1-223ENST00000600523 MRPL35Q9NZE8 188 aaKnown RBP8.36□□□□□ -1.07
SRRM1-223ENST00000600523 IGKV2-24A0A0C4DH68 120 aa8.35□□□□□ -1.07
SRRM1-223ENST00000600523 EPM2AB3EWF7 344 aa8.35□□□□□ -1.07
SRRM1-223ENST00000600523 IGLC3P0DOY3 106 aa8.35□□□□□ -1.07
SRRM1-223ENST00000600523 CXCL5P42830 114 aa8.35□□□□□ -1.07
SRRM1-223ENST00000600523 HAMPP81172 84 aa8.35□□□□□ -1.07
SRRM1-223ENST00000600523 CHTOPQ9Y3Y2 248 aaKnown RBP8.35□□□□□ -1.07
SRRM1-223ENST00000600523 LRP1BQ9NZR2 4599 aa8.34□□□□□ -1.07
SRRM1-223ENST00000600523 IGLV5-45A0A087WSX0 123 aa8.34□□□□□ -1.07
SRRM1-223ENST00000600523 TRBV30A0A0K0K1B3 111 aa8.34□□□□□ -1.07
SRRM1-223ENST00000600523 SMR3BP02814 79 aaPredicted RBP8.34□□□□□ -1.07
SRRM1-223ENST00000600523 RPL18AQ02543 176 aaKnown RBP8.34□□□□□ -1.07
SRRM1-223ENST00000600523 MAJINQ3KP22 176 aa8.34□□□□□ -1.07
SRRM1-223ENST00000600523 CIRBP-AS1Q8TBR5 109 aa8.34□□□□□ -1.07
SRRM1-223ENST00000600523 TRAV12-1A0A0B4J245 112 aa8.33□□□□□ -1.08
SRRM1-223ENST00000600523 HIST1H2BKO60814 126 aa8.33□□□□□ -1.08
SRRM1-223ENST00000600523 HIST1H2BJP06899 126 aa8.33□□□□□ -1.08
SRRM1-223ENST00000600523 HIST1H2BOP23527 126 aa8.33□□□□□ -1.08
SRRM1-223ENST00000600523 HIST1H2BBP33778 126 aa8.33□□□□□ -1.08
SRRM1-223ENST00000600523 HIST1H2BDP58876 126 aa8.33□□□□□ -1.08
SRRM1-223ENST00000600523 HIST1H2BCP62807 126 aa8.33□□□□□ -1.08
SRRM1-223ENST00000600523 GAGE2BQ13066 116 aa8.33□□□□□ -1.08
SRRM1-223ENST00000600523 HIST2H2BEQ16778 126 aa8.33□□□□□ -1.08
SRRM1-223ENST00000600523 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.33□□□□□ -1.08
SRRM1-223ENST00000600523 TMEM170BQ5T4T1 132 aa8.33□□□□□ -1.08
SRRM1-223ENST00000600523 HIST1H2BHQ93079 126 aa8.33□□□□□ -1.08
SRRM1-223ENST00000600523 HIST1H2BNQ99877 126 aa8.33□□□□□ -1.08
SRRM1-223ENST00000600523 HIST1H2BMQ99879 126 aa8.33□□□□□ -1.08
SRRM1-223ENST00000600523 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.33□□□□□ -1.08
SRRM1-223ENST00000600523 DNAH5Q8TE73 4624 aa8.33□□□□□ -1.08
SRRM1-223ENST00000600523 PLA2G1BP04054 148 aaKnown RBP8.32□□□□□ -1.08
SRRM1-223ENST00000600523 SPINK8P0C7L1 97 aa8.32□□□□□ -1.08
SRRM1-223ENST00000600523 FABP4P15090 132 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms