RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 PTTG1IPP53801 180 aa14.42□□□□□ -0.1
SSBP4-205ENST00000598159 OPRPNQ99935 248 aaPredicted RBP14.42□□□□□ -0.1
SSBP4-205ENST00000598159 IGHV3OR16-9A0A0B4J2B5 98 aa14.4□□□□□ -0.1
SSBP4-205ENST00000598159 GAGE2BQ13066 116 aa14.4□□□□□ -0.1
SSBP4-205ENST00000598159 OR10D4PQ8NGN7 298 aa14.4□□□□□ -0.1
SSBP4-205ENST00000598159 PYGO1Q9Y3Y4 419 aa14.4□□□□□ -0.1
SSBP4-205ENST00000598159 F8WDY8 70 aa14.39□□□□□ -0.11
SSBP4-205ENST00000598159 IFI27P40305 119 aaPredicted RBP14.39□□□□□ -0.11
SSBP4-205ENST00000598159 RNF151Q2KHN1 245 aa14.39□□□□□ -0.11
SSBP4-205ENST00000598159 IFITM10A6NMD0 228 aa14.38□□□□□ -0.11
SSBP4-205ENST00000598159 PRR3P79522 188 aaKnown RBP14.38□□□□□ -0.11
SSBP4-205ENST00000598159 SPAG11BQ08648 103 aa14.38□□□□□ -0.11
SSBP4-205ENST00000598159 MAP1LC3AQ9H492 121 aa14.38□□□□□ -0.11
SSBP4-205ENST00000598159 LOC389332A0A1B0GUA5 103 aa14.36□□□□□ -0.11
SSBP4-205ENST00000598159 CLLU1Q5K131 121 aa14.36□□□□□ -0.11
SSBP4-205ENST00000598159 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.35□□□□□ -0.11
SSBP4-205ENST00000598159 MT1HL1P0DM35 61 aa14.35□□□□□ -0.11
SSBP4-205ENST00000598159 ORAOV1Q8WV07 137 aa14.35□□□□□ -0.11
SSBP4-205ENST00000598159 Q6ZRP5 223 aa14.34□□□□□ -0.11
SSBP4-205ENST00000598159 Q8N8P6 123 aa14.34□□□□□ -0.11
SSBP4-205ENST00000598159 TMEM141Q96I45 108 aa14.34□□□□□ -0.11
SSBP4-205ENST00000598159 TGIF2-C20orf24A0A0A6YYL0 155 aa14.33□□□□□ -0.12
SSBP4-205ENST00000598159 MRPL35Q9NZE8 188 aaKnown RBP14.33□□□□□ -0.12
SSBP4-205ENST00000598159 IGLV4-3A0A075B6K6 122 aa14.32□□□□□ -0.12
SSBP4-205ENST00000598159 IMMP2LQ96T52 175 aa14.32□□□□□ -0.12
SSBP4-205ENST00000598159 A0A1W2PNN7 141 aa14.31□□□□□ -0.12
SSBP4-205ENST00000598159 K7EMI3 77 aa14.31□□□□□ -0.12
SSBP4-205ENST00000598159 NDUFA1O15239 70 aa14.31□□□□□ -0.12
SSBP4-205ENST00000598159 RPL18AQ02543 176 aaKnown RBP14.31□□□□□ -0.12
SSBP4-205ENST00000598159 SPINK6Q6UWN8 80 aa14.31□□□□□ -0.12
SSBP4-205ENST00000598159 A0A087WZ39 114 aa14.3□□□□□ -0.12
SSBP4-205ENST00000598159 A0A0J9YXV3 536 aa14.3□□□□□ -0.12
SSBP4-205ENST00000598159 ORMDL2Q53FV1 153 aa14.3□□□□□ -0.12
SSBP4-205ENST00000598159 LINC00242Q5T6M2 205 aa14.3□□□□□ -0.12
SSBP4-205ENST00000598159 TEX43Q6ZNM6 134 aa14.3□□□□□ -0.12
SSBP4-205ENST00000598159 CTDSP1Q9GZU7 261 aa14.3□□□□□ -0.12
SSBP4-205ENST00000598159 PLA2G2DQ9UNK4 145 aa14.3□□□□□ -0.12
SSBP4-205ENST00000598159 CYSLTR1Q9Y271 337 aa14.3□□□□□ -0.12
SSBP4-205ENST00000598159 C9orf116Q5BN46 136 aaPredicted RBP14.29□□□□□ -0.12
SSBP4-205ENST00000598159 UQCC3Q6UW78 93 aa14.29□□□□□ -0.12
SSBP4-205ENST00000598159 C2orf66Q6UXQ4 117 aa14.29□□□□□ -0.12
SSBP4-205ENST00000598159 NPSP0C0P6 89 aa14.28□□□□□ -0.12
SSBP4-205ENST00000598159 HMCN2Q8NDA2 5059 aa14.28□□□□□ -0.12
SSBP4-205ENST00000598159 LINC01600Q96MT4 127 aa14.28□□□□□ -0.12
SSBP4-205ENST00000598159 NXT2Q9NPJ8 142 aaKnown RBP14.28□□□□□ -0.12
SSBP4-205ENST00000598159 SRSF9Q13242 221 aaKnown RBP eCLIP14.27□□□□□ -0.13
SSBP4-205ENST00000598159 Q6ZN92 141 aa14.27□□□□□ -0.13
SSBP4-205ENST00000598159 C2orf88Q9BSF0 95 aa14.27□□□□□ -0.13
SSBP4-205ENST00000598159 TLX1NBP0CAT3 122 aa14.26□□□□□ -0.13
SSBP4-205ENST00000598159 G0S2P27469 103 aa14.26□□□□□ -0.13
SSBP4-205ENST00000598159 UBE2D1P51668 147 aa14.26□□□□□ -0.13
SSBP4-205ENST00000598159 UNQ6190/PRO20217Q6UXQ8 127 aa14.26□□□□□ -0.13
SSBP4-205ENST00000598159 LINC01561Q8N1V8 128 aa14.26□□□□□ -0.13
SSBP4-205ENST00000598159 VCX2Q9H322 139 aa14.26□□□□□ -0.13
SSBP4-205ENST00000598159 TMEM218A2RU14 115 aa14.25□□□□□ -0.13
SSBP4-205ENST00000598159 KIAA0087Q14695 138 aa14.25□□□□□ -0.13
SSBP4-205ENST00000598159 C10orf25Q5T742 122 aa14.25□□□□□ -0.13
SSBP4-205ENST00000598159 AMELXQ99217 191 aa14.25□□□□□ -0.13
SSBP4-205ENST00000598159 REG3GQ6UW15 175 aa14.24□□□□□ -0.13
SSBP4-205ENST00000598159 TRAV9-1A0A075B6T8 112 aa14.23□□□□□ -0.13
SSBP4-205ENST00000598159 IGIPA6NJ69 53 aa14.23□□□□□ -0.13
SSBP4-205ENST00000598159 ADCYAP1P18509 176 aa14.23□□□□□ -0.13
SSBP4-205ENST00000598159 C6orf48Q9UBA6 75 aa14.23□□□□□ -0.13
SSBP4-205ENST00000598159 IFITM2Q01629 132 aa14.22□□□□□ -0.13
SSBP4-205ENST00000598159 PAPPA-AS1Q5QFB9 102 aa14.21□□□□□ -0.13
SSBP4-205ENST00000598159 LINC00173Q6ZV60 143 aa14.21□□□□□ -0.13
SSBP4-205ENST00000598159 TRBV30A0A0K0K1B3 111 aa14.2□□□□□ -0.14
SSBP4-205ENST00000598159 ZC2HC1BQ5TFG8 222 aa14.2□□□□□ -0.14
SSBP4-205ENST00000598159 FAM19A3Q7Z5A8 133 aa14.2□□□□□ -0.14
SSBP4-205ENST00000598159 SEC11CQ9BY50 192 aa14.2□□□□□ -0.14
SSBP4-205ENST00000598159 MT-ND6P03923 174 aa14.19□□□□□ -0.14
SSBP4-205ENST00000598159 KIAA1644Q3SXP7 199 aa14.19□□□□□ -0.14
SSBP4-205ENST00000598159 PHF5AQ7RTV0 110 aaKnown RBP14.19□□□□□ -0.14
SSBP4-205ENST00000598159 PSORS1C2Q9UIG4 136 aa14.19□□□□□ -0.14
SSBP4-205ENST00000598159 SEC11AP67812 179 aa14.18□□□□□ -0.14
SSBP4-205ENST00000598159 PACRGQ96M98 296 aaPredicted RBP14.18□□□□□ -0.14
SSBP4-205ENST00000598159 S100PP25815 95 aa14.17□□□□□ -0.14
SSBP4-205ENST00000598159 GAGE2EQ4V326 116 aa14.17□□□□□ -0.14
SSBP4-205ENST00000598159 TOMM6Q96B49 74 aa14.17□□□□□ -0.14
SSBP4-205ENST00000598159 TIMM17AQ99595 171 aa14.17□□□□□ -0.14
SSBP4-205ENST00000598159 GAGE2DQ9UEU5 116 aa14.17□□□□□ -0.14
SSBP4-205ENST00000598159 C2orf82Q6UX34 121 aa14.16□□□□□ -0.14
SSBP4-205ENST00000598159 GNB1LQ9BYB4 327 aa14.16□□□□□ -0.14
SSBP4-205ENST00000598159 PRSS2P07478 247 aa14.15□□□□□ -0.14
SSBP4-205ENST00000598159 KRTAP10-8P60410 259 aa14.15□□□□□ -0.14
SSBP4-205ENST00000598159 FAM168BA1KXE4 195 aa14.14□□□□□ -0.15
SSBP4-205ENST00000598159 NDUFC2-KCTD14E9PQ53 114 aa14.14□□□□□ -0.15
SSBP4-205ENST00000598159 HERVK_113P63121 156 aa14.14□□□□□ -0.15
SSBP4-205ENST00000598159 C1orf137Q5JT78 98 aa14.14□□□□□ -0.15
SSBP4-205ENST00000598159 COX19Q49B96 90 aa14.13□□□□□ -0.15
SSBP4-205ENST00000598159 C6orf226Q5I0X4 101 aa14.13□□□□□ -0.15
SSBP4-205ENST00000598159 ERASQ7Z444 233 aa14.13□□□□□ -0.15
SSBP4-205ENST00000598159 LINC01549A6NIU2 74 aa14.12□□□□□ -0.15
SSBP4-205ENST00000598159 CKS1BP61024 79 aa14.12□□□□□ -0.15
SSBP4-205ENST00000598159 Q8IZM0 81 aa14.12□□□□□ -0.15
SSBP4-205ENST00000598159 GEMIN7Q9H840 131 aaKnown RBP14.12□□□□□ -0.15
SSBP4-205ENST00000598159 SCGB3A1Q96QR1 104 aa14.11□□□□□ -0.15
SSBP4-205ENST00000598159 TOMM7Q9P0U1 55 aa14.11□□□□□ -0.15
SSBP4-205ENST00000598159 LINC01546A6NGU7 62 aa14.1□□□□□ -0.15
SSBP4-205ENST00000598159 FAM19A5Q7Z5A7 132 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms