RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 GAGE2BQ13066 116 aa9.44□□□□□ -0.9
LIG1-215ENST00000597901 CAMK2N2Q96S95 79 aa9.44□□□□□ -0.9
LIG1-215ENST00000597901 PLA2G2DQ9UNK4 145 aa9.44□□□□□ -0.9
LIG1-215ENST00000597901 IGHV3OR16-9A0A0B4J2B5 98 aa9.43□□□□□ -0.9
LIG1-215ENST00000597901 LOC107984640A0A0U1RRK4 108 aa9.43□□□□□ -0.9
LIG1-215ENST00000597901 PTTG1IPP53801 180 aa9.43□□□□□ -0.9
LIG1-215ENST00000597901 LAMTOR2Q9Y2Q5 125 aa9.43□□□□□ -0.9
LIG1-215ENST00000597901 PYGO1Q9Y3Y4 419 aa9.43□□□□□ -0.9
LIG1-215ENST00000597901 IFITM10A6NMD0 228 aa9.42□□□□□ -0.9
LIG1-215ENST00000597901 MAP1LC3AQ9H492 121 aa9.42□□□□□ -0.9
LIG1-215ENST00000597901 IFI27P40305 119 aaPredicted RBP9.41□□□□□ -0.9
LIG1-215ENST00000597901 SPAG11BQ08648 103 aa9.41□□□□□ -0.9
LIG1-215ENST00000597901 RNF151Q2KHN1 245 aa9.41□□□□□ -0.9
LIG1-215ENST00000597901 Q8N8P6 123 aa9.41□□□□□ -0.9
LIG1-215ENST00000597901 OR10D4PQ8NGN7 298 aa9.41□□□□□ -0.9
LIG1-215ENST00000597901 A0A1W2PNN7 141 aa9.4□□□□□ -0.9
LIG1-215ENST00000597901 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.4□□□□□ -0.9
LIG1-215ENST00000597901 PRR3P79522 188 aaKnown RBP9.4□□□□□ -0.9
LIG1-215ENST00000597901 ORAOV1Q8WV07 137 aa9.4□□□□□ -0.9
LIG1-215ENST00000597901 IGLV4-3A0A075B6K6 122 aa9.39□□□□□ -0.91
LIG1-215ENST00000597901 A0A0J9YXV3 536 aa9.39□□□□□ -0.91
LIG1-215ENST00000597901 F8WDY8 70 aa9.39□□□□□ -0.91
LIG1-215ENST00000597901 MT1HL1P0DM35 61 aa9.39□□□□□ -0.91
LIG1-215ENST00000597901 IFITM2Q01629 132 aa9.39□□□□□ -0.91
LIG1-215ENST00000597901 IMMP2LQ96T52 175 aa9.39□□□□□ -0.91
LIG1-215ENST00000597901 TMEM218A2RU14 115 aa9.38□□□□□ -0.91
LIG1-215ENST00000597901 LINC00242Q5T6M2 205 aa9.38□□□□□ -0.91
LIG1-215ENST00000597901 UQCC3Q6UW78 93 aa9.38□□□□□ -0.91
LIG1-215ENST00000597901 TMEM141Q96I45 108 aa9.38□□□□□ -0.91
LIG1-215ENST00000597901 CTDSP1Q9GZU7 261 aa9.38□□□□□ -0.91
LIG1-215ENST00000597901 MRPL35Q9NZE8 188 aaKnown RBP9.38□□□□□ -0.91
LIG1-215ENST00000597901 CYSLTR1Q9Y271 337 aa9.37□□□□□ -0.91
LIG1-215ENST00000597901 A0A087WZ39 114 aa9.36□□□□□ -0.91
LIG1-215ENST00000597901 TGIF2-C20orf24A0A0A6YYL0 155 aa9.36□□□□□ -0.91
LIG1-215ENST00000597901 ADCYAP1P18509 176 aa9.36□□□□□ -0.91
LIG1-215ENST00000597901 RPL18AQ02543 176 aaKnown RBP9.36□□□□□ -0.91
LIG1-215ENST00000597901 ORMDL2Q53FV1 153 aa9.36□□□□□ -0.91
LIG1-215ENST00000597901 C9orf116Q5BN46 136 aaPredicted RBP9.36□□□□□ -0.91
LIG1-215ENST00000597901 C10orf25Q5T742 122 aa9.36□□□□□ -0.91
LIG1-215ENST00000597901 C2orf66Q6UXQ4 117 aa9.36□□□□□ -0.91
LIG1-215ENST00000597901 UNQ6190/PRO20217Q6UXQ8 127 aa9.36□□□□□ -0.91
LIG1-215ENST00000597901 Q6ZRP5 223 aa9.36□□□□□ -0.91
LIG1-215ENST00000597901 K7EMI3 77 aa9.35□□□□□ -0.91
LIG1-215ENST00000597901 NDUFA1O15239 70 aa9.35□□□□□ -0.91
LIG1-215ENST00000597901 UBE2D1P51668 147 aa9.35□□□□□ -0.91
LIG1-215ENST00000597901 SRSF9Q13242 221 aaKnown RBP eCLIP9.35□□□□□ -0.91
LIG1-215ENST00000597901 KIAA0087Q14695 138 aa9.35□□□□□ -0.91
LIG1-215ENST00000597901 ZC2HC1BQ5TFG8 222 aa9.35□□□□□ -0.91
LIG1-215ENST00000597901 TEX43Q6ZNM6 134 aa9.35□□□□□ -0.91
LIG1-215ENST00000597901 VCX2Q9H322 139 aa9.35□□□□□ -0.91
LIG1-215ENST00000597901 IGIPA6NJ69 53 aa9.34□□□□□ -0.91
LIG1-215ENST00000597901 KIAA1644Q3SXP7 199 aa9.34□□□□□ -0.91
LIG1-215ENST00000597901 SPINK6Q6UWN8 80 aa9.34□□□□□ -0.91
LIG1-215ENST00000597901 AMELXQ99217 191 aa9.34□□□□□ -0.91
LIG1-215ENST00000597901 NXT2Q9NPJ8 142 aaKnown RBP9.34□□□□□ -0.91
LIG1-215ENST00000597901 Q6ZN92 141 aa9.33□□□□□ -0.92
LIG1-215ENST00000597901 LINC01600Q96MT4 127 aa9.33□□□□□ -0.92
LIG1-215ENST00000597901 C2orf88Q9BSF0 95 aa9.33□□□□□ -0.92
LIG1-215ENST00000597901 C6orf48Q9UBA6 75 aa9.33□□□□□ -0.92
LIG1-215ENST00000597901 TRAV9-1A0A075B6T8 112 aa9.32□□□□□ -0.92
LIG1-215ENST00000597901 NPSP0C0P6 89 aa9.32□□□□□ -0.92
LIG1-215ENST00000597901 TLX1NBP0CAT3 122 aa9.32□□□□□ -0.92
LIG1-215ENST00000597901 LINC00173Q6ZV60 143 aa9.32□□□□□ -0.92
LIG1-215ENST00000597901 LINC01561Q8N1V8 128 aa9.32□□□□□ -0.92
LIG1-215ENST00000597901 SEC11CQ9BY50 192 aa9.32□□□□□ -0.92
LIG1-215ENST00000597901 G0S2P27469 103 aa9.31□□□□□ -0.92
LIG1-215ENST00000597901 PHF5AQ7RTV0 110 aaKnown RBP9.31□□□□□ -0.92
LIG1-215ENST00000597901 HMCN2Q8NDA2 5059 aa9.31□□□□□ -0.92
LIG1-215ENST00000597901 C2orf82Q6UX34 121 aa9.3□□□□□ -0.92
LIG1-215ENST00000597901 FAM19A3Q7Z5A8 133 aa9.3□□□□□ -0.92
LIG1-215ENST00000597901 GAGE2EQ4V326 116 aa9.29□□□□□ -0.92
LIG1-215ENST00000597901 TOMM6Q96B49 74 aa9.29□□□□□ -0.92
LIG1-215ENST00000597901 GNB1LQ9BYB4 327 aa9.29□□□□□ -0.92
LIG1-215ENST00000597901 GAGE2DQ9UEU5 116 aa9.29□□□□□ -0.92
LIG1-215ENST00000597901 PSORS1C2Q9UIG4 136 aa9.29□□□□□ -0.92
LIG1-215ENST00000597901 FAM168BA1KXE4 195 aa9.28□□□□□ -0.92
LIG1-215ENST00000597901 S100PP25815 95 aa9.28□□□□□ -0.92
LIG1-215ENST00000597901 PAPPA-AS1Q5QFB9 102 aa9.28□□□□□ -0.92
LIG1-215ENST00000597901 REG3GQ6UW15 175 aa9.28□□□□□ -0.92
LIG1-215ENST00000597901 TRBV30A0A0K0K1B3 111 aa9.27□□□□□ -0.93
LIG1-215ENST00000597901 MT-ND6P03923 174 aa9.27□□□□□ -0.93
LIG1-215ENST00000597901 KRTAP10-8P60410 259 aa9.27□□□□□ -0.93
LIG1-215ENST00000597901 C10orf91Q5T1B1 145 aa9.27□□□□□ -0.93
LIG1-215ENST00000597901 COMMD7Q86VX2 200 aa9.27□□□□□ -0.93
LIG1-215ENST00000597901 PACRGQ96M98 296 aaPredicted RBP9.27□□□□□ -0.93
LIG1-215ENST00000597901 TIMM17AQ99595 171 aa9.27□□□□□ -0.93
LIG1-215ENST00000597901 ALKBH7Q9BT30 221 aaPredicted RBP9.27□□□□□ -0.93
LIG1-215ENST00000597901 SEC11AP67812 179 aa9.26□□□□□ -0.93
LIG1-215ENST00000597901 C6orf226Q5I0X4 101 aa9.26□□□□□ -0.93
LIG1-215ENST00000597901 C1orf137Q5JT78 98 aa9.26□□□□□ -0.93
LIG1-215ENST00000597901 ERASQ7Z444 233 aa9.26□□□□□ -0.93
LIG1-215ENST00000597901 SCGB3A1Q96QR1 104 aa9.26□□□□□ -0.93
LIG1-215ENST00000597901 PRSS2P07478 247 aa9.25□□□□□ -0.93
LIG1-215ENST00000597901 HERVK_113P63121 156 aa9.25□□□□□ -0.93
LIG1-215ENST00000597901 COX19Q49B96 90 aa9.25□□□□□ -0.93
LIG1-215ENST00000597901 KRTAP7-1Q8IUC3 87 aa9.25□□□□□ -0.93
LIG1-215ENST00000597901 TOMM7Q9P0U1 55 aa9.25□□□□□ -0.93
LIG1-215ENST00000597901 CDKN2A-AS1Q9UH64 79 aa9.25□□□□□ -0.93
LIG1-215ENST00000597901 LINC01546A6NGU7 62 aa9.24□□□□□ -0.93
LIG1-215ENST00000597901 NDUFC2-KCTD14E9PQ53 114 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms