RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 LINC01620Q4KN68 170 aa9.33□□□□□ -0.92
LIG1-208ENST00000595758 LINC00242Q5T6M2 205 aa9.33□□□□□ -0.92
LIG1-208ENST00000595758 BAGE3Q86Y29 109 aa9.33□□□□□ -0.92
LIG1-208ENST00000595758 CHCHD1Q96BP2 118 aaKnown RBP9.33□□□□□ -0.92
LIG1-208ENST00000595758 A0A096LNJ9 63 aa9.32□□□□□ -0.92
LIG1-208ENST00000595758 IGHV3OR16-9A0A0B4J2B5 98 aa9.32□□□□□ -0.92
LIG1-208ENST00000595758 S100A1P23297 94 aa9.32□□□□□ -0.92
LIG1-208ENST00000595758 CNBPP62633 177 aaKnown RBP9.32□□□□□ -0.92
LIG1-208ENST00000595758 RYR1P21817 5038 aa9.32□□□□□ -0.92
LIG1-208ENST00000595758 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.31□□□□□ -0.92
LIG1-208ENST00000595758 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.31□□□□□ -0.92
LIG1-208ENST00000595758 APOMO95445 188 aa9.31□□□□□ -0.92
LIG1-208ENST00000595758 SLPIP03973 132 aa9.31□□□□□ -0.92
LIG1-208ENST00000595758 COX6A2Q02221 97 aa9.31□□□□□ -0.92
LIG1-208ENST00000595758 C9orf163Q8N9P6 203 aa9.31□□□□□ -0.92
LIG1-208ENST00000595758 ZNF561-AS1K7EIQ3 104 aa9.3□□□□□ -0.92
LIG1-208ENST00000595758 ATP6V1G1O75348 118 aa9.3□□□□□ -0.92
LIG1-208ENST00000595758 PDZD11Q5EBL8 140 aa9.3□□□□□ -0.92
LIG1-208ENST00000595758 SEC11AP67812 179 aa9.29□□□□□ -0.92
LIG1-208ENST00000595758 PMVKQ15126 192 aa9.29□□□□□ -0.92
LIG1-208ENST00000595758 FAM19A3Q7Z5A8 133 aa9.29□□□□□ -0.92
LIG1-208ENST00000595758 LINC00526Q96FQ7 95 aa9.29□□□□□ -0.92
LIG1-208ENST00000595758 CST9LQ9H4G1 147 aa9.29□□□□□ -0.92
LIG1-208ENST00000595758 IGHV3-64A0A075B6Q5 118 aa9.28□□□□□ -0.92
LIG1-208ENST00000595758 A0A087WZ39 114 aa9.28□□□□□ -0.92
LIG1-208ENST00000595758 A0A0J9YXV3 536 aa9.28□□□□□ -0.92
LIG1-208ENST00000595758 HSBP1O75506 76 aa9.28□□□□□ -0.92
LIG1-208ENST00000595758 ATP5LO75964 103 aa9.28□□□□□ -0.92
LIG1-208ENST00000595758 GEMIN7Q9H840 131 aaKnown RBP9.28□□□□□ -0.92
LIG1-208ENST00000595758 FAM30AQ9NZY2 134 aa9.28□□□□□ -0.92
LIG1-208ENST00000595758 NDUFA6P56556 154 aa9.27□□□□□ -0.93
LIG1-208ENST00000595758 HERVK_113P63121 156 aa9.27□□□□□ -0.93
LIG1-208ENST00000595758 OR10D4PQ8NGN7 298 aa9.27□□□□□ -0.93
LIG1-208ENST00000595758 ORAOV1Q8WV07 137 aa9.27□□□□□ -0.93
LIG1-208ENST00000595758 HERC2O95714 4834 aa9.27□□□□□ -0.93
LIG1-208ENST00000595758 APOBP04114 4563 aaKnown RBP9.27□□□□□ -0.93
LIG1-208ENST00000595758 IGLV4-69A0A075B6H9 119 aa9.26□□□□□ -0.93
LIG1-208ENST00000595758 SERF1AO75920 110 aa9.26□□□□□ -0.93
LIG1-208ENST00000595758 XGP55808 180 aa9.26□□□□□ -0.93
LIG1-208ENST00000595758 SPAG11BQ08648 103 aa9.26□□□□□ -0.93
LIG1-208ENST00000595758 SDIM1Q6ZPB5 146 aa9.26□□□□□ -0.93
LIG1-208ENST00000595758 Q6ZSA8 131 aa9.26□□□□□ -0.93
LIG1-208ENST00000595758 LINC01561Q8N1V8 128 aa9.26□□□□□ -0.93
LIG1-208ENST00000595758 SYCNQ0VAF6 134 aa9.25□□□□□ -0.93
LIG1-208ENST00000595758 FAM19A2Q8N3H0 131 aa9.25□□□□□ -0.93
LIG1-208ENST00000595758 C2orf48Q96LS8 159 aa9.25□□□□□ -0.93
LIG1-208ENST00000595758 DNAH8Q96JB1 4490 aa9.25□□□□□ -0.93
LIG1-208ENST00000595758 TINCRA0A1B0GVN0 87 aa9.24□□□□□ -0.93
LIG1-208ENST00000595758 LINC00310P59036 64 aa9.24□□□□□ -0.93
LIG1-208ENST00000595758 CARD19Q96LW7 228 aa9.24□□□□□ -0.93
LIG1-208ENST00000595758 CAMK2N2Q96S95 79 aa9.24□□□□□ -0.93
LIG1-208ENST00000595758 CDKN2A-AS1Q9UH64 79 aa9.24□□□□□ -0.93
LIG1-208ENST00000595758 HIST1H2BKO60814 126 aa9.23□□□□□ -0.93
LIG1-208ENST00000595758 HIST1H2BJP06899 126 aa9.23□□□□□ -0.93
LIG1-208ENST00000595758 HIST1H2BOP23527 126 aa9.23□□□□□ -0.93
LIG1-208ENST00000595758 HIST1H2BBP33778 126 aa9.23□□□□□ -0.93
LIG1-208ENST00000595758 HIST1H2BDP58876 126 aa9.23□□□□□ -0.93
LIG1-208ENST00000595758 HIST1H2BCP62807 126 aa9.23□□□□□ -0.93
LIG1-208ENST00000595758 HAMPP81172 84 aa9.23□□□□□ -0.93
LIG1-208ENST00000595758 HIST2H2BEQ16778 126 aa9.23□□□□□ -0.93
LIG1-208ENST00000595758 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.23□□□□□ -0.93
LIG1-208ENST00000595758 LINC00469Q8N7U9 141 aa9.23□□□□□ -0.93
LIG1-208ENST00000595758 HIST1H2BHQ93079 126 aa9.23□□□□□ -0.93
LIG1-208ENST00000595758 HIST1H2BNQ99877 126 aa9.23□□□□□ -0.93
LIG1-208ENST00000595758 HIST1H2BMQ99879 126 aa9.23□□□□□ -0.93
LIG1-208ENST00000595758 F8WDY8 70 aa9.22□□□□□ -0.93
LIG1-208ENST00000595758 NUPR1O60356 82 aa9.22□□□□□ -0.93
LIG1-208ENST00000595758 IFI27L1Q96BM0 104 aa9.22□□□□□ -0.93
LIG1-208ENST00000595758 PACRGQ96M98 296 aaPredicted RBP9.22□□□□□ -0.93
LIG1-208ENST00000595758 HSPG2P98160 4391 aa9.21□□□□□ -0.93
LIG1-208ENST00000595758 IGLV5-45A0A087WSX0 123 aa9.21□□□□□ -0.94
LIG1-208ENST00000595758 Q6ZRU5 148 aa9.21□□□□□ -0.94
LIG1-208ENST00000595758 CHAC1Q9BUX1 264 aa9.21□□□□□ -0.94
LIG1-208ENST00000595758 LEPROTL1O95214 131 aa9.2□□□□□ -0.94
LIG1-208ENST00000595758 IGLC3P0DOY3 106 aa9.2□□□□□ -0.94
LIG1-208ENST00000595758 KIAA0087Q14695 138 aa9.2□□□□□ -0.94
LIG1-208ENST00000595758 PKIGQ9Y2B9 76 aa9.2□□□□□ -0.94
LIG1-208ENST00000595758 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.2□□□□□ -0.94
LIG1-208ENST00000595758 H3BRM9 83 aa9.19□□□□□ -0.94
LIG1-208ENST00000595758 NDUFA1O15239 70 aa9.19□□□□□ -0.94
LIG1-208ENST00000595758 PRSS2P07478 247 aa9.19□□□□□ -0.94
LIG1-208ENST00000595758 SCXQ7RTU7 201 aa9.19□□□□□ -0.94
LIG1-208ENST00000595758 TOMM7Q9P0U1 55 aa9.19□□□□□ -0.94
LIG1-208ENST00000595758 TRAV12-1A0A0B4J245 112 aa9.18□□□□□ -0.94
LIG1-208ENST00000595758 PANO1I0J062 215 aa9.18□□□□□ -0.94
LIG1-208ENST00000595758 CHTF8P0CG12 524 aa9.18□□□□□ -0.94
LIG1-208ENST00000595758 RNF151Q2KHN1 245 aa9.18□□□□□ -0.94
LIG1-208ENST00000595758 C6orf226Q5I0X4 101 aa9.18□□□□□ -0.94
LIG1-208ENST00000595758 UNQ6190/PRO20217Q6UXQ8 127 aa9.18□□□□□ -0.94
LIG1-208ENST00000595758 DPH3Q96FX2 82 aa9.18□□□□□ -0.94
LIG1-208ENST00000595758 MRPL35Q9NZE8 188 aaKnown RBP9.18□□□□□ -0.94
LIG1-208ENST00000595758 HSPB8Q9UJY1 196 aa9.18□□□□□ -0.94
LIG1-208ENST00000595758 CHTOPQ9Y3Y2 248 aaKnown RBP9.18□□□□□ -0.94
LIG1-208ENST00000595758 SMIM1B2RUZ4 78 aa9.17□□□□□ -0.94
LIG1-208ENST00000595758 SMR3BP02814 79 aaPredicted RBP9.17□□□□□ -0.94
LIG1-208ENST00000595758 SPINK8P0C7L1 97 aa9.17□□□□□ -0.94
LIG1-208ENST00000595758 FABP4P15090 132 aa9.17□□□□□ -0.94
LIG1-208ENST00000595758 C10orf25Q5T742 122 aa9.17□□□□□ -0.94
LIG1-208ENST00000595758 Q8IZM0 81 aa9.17□□□□□ -0.94
LIG1-208ENST00000595758 Q8N1X5 172 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 349.1 ms