RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.24□□□□□ -0.61
SHKBP1-203ENST00000594298 IGHV1-58A0A0C4DH39 117 aa11.23□□□□□ -0.61
SHKBP1-203ENST00000594298 SDIM1Q6ZPB5 146 aa11.23□□□□□ -0.61
SHKBP1-203ENST00000594298 PRSS3P2Q8NHM4 247 aa11.23□□□□□ -0.61
SHKBP1-203ENST00000594298 MALP21145 153 aa11.22□□□□□ -0.61
SHKBP1-203ENST00000594298 C2orf66Q6UXQ4 117 aa11.22□□□□□ -0.61
SHKBP1-203ENST00000594298 C15orf56Q8N910 161 aa11.22□□□□□ -0.61
SHKBP1-203ENST00000594298 ALKBH7Q9BT30 221 aaPredicted RBP11.22□□□□□ -0.61
SHKBP1-203ENST00000594298 TGIF2-C20orf24A0A0A6YYL0 155 aa11.21□□□□□ -0.61
SHKBP1-203ENST00000594298 PANO1I0J062 215 aa11.21□□□□□ -0.61
SHKBP1-203ENST00000594298 COX7A2LO14548 114 aa11.21□□□□□ -0.61
SHKBP1-203ENST00000594298 TRAPPC1Q9Y5R8 145 aa11.21□□□□□ -0.61
SHKBP1-203ENST00000594298 GVQW2A0A096LPI5 108 aaPredicted RBP11.2□□□□□ -0.62
SHKBP1-203ENST00000594298 IFITM10A6NMD0 228 aa11.2□□□□□ -0.62
SHKBP1-203ENST00000594298 NPSP0C0P6 89 aa11.2□□□□□ -0.62
SHKBP1-203ENST00000594298 CIRBPQ14011 172 aaKnown RBP11.2□□□□□ -0.62
SHKBP1-203ENST00000594298 Q6ZN92 141 aa11.2□□□□□ -0.62
SHKBP1-203ENST00000594298 TMEM141Q96I45 108 aa11.2□□□□□ -0.62
SHKBP1-203ENST00000594298 OPRPNQ99935 248 aaPredicted RBP11.2□□□□□ -0.62
SHKBP1-203ENST00000594298 LINC01549A6NIU2 74 aa11.19□□□□□ -0.62
SHKBP1-203ENST00000594298 HIGD2BQ4VC39 106 aa11.19□□□□□ -0.62
SHKBP1-203ENST00000594298 Q6ZRU5 148 aa11.19□□□□□ -0.62
SHKBP1-203ENST00000594298 IGLV4-3A0A075B6K6 122 aa11.18□□□□□ -0.62
SHKBP1-203ENST00000594298 IGHV3-64A0A075B6Q5 118 aa11.18□□□□□ -0.62
SHKBP1-203ENST00000594298 ZNF561-AS1K7EIQ3 104 aa11.18□□□□□ -0.62
SHKBP1-203ENST00000594298 APOMO95445 188 aa11.18□□□□□ -0.62
SHKBP1-203ENST00000594298 MT1HL1P0DM35 61 aa11.18□□□□□ -0.62
SHKBP1-203ENST00000594298 PAPPA-AS1Q5QFB9 102 aa11.18□□□□□ -0.62
SHKBP1-203ENST00000594298 TEX43Q6ZNM6 134 aa11.18□□□□□ -0.62
SHKBP1-203ENST00000594298 FAM104AQ969W3 186 aa11.18□□□□□ -0.62
SHKBP1-203ENST00000594298 C2orf88Q9BSF0 95 aa11.18□□□□□ -0.62
SHKBP1-203ENST00000594298 FA2HQ7L5A8 372 aa11.17□□□□□ -0.62
SHKBP1-203ENST00000594298 SLC7A5P1Q8MH63 180 aa11.17□□□□□ -0.62
SHKBP1-203ENST00000594298 VCX2Q9H322 139 aa11.17□□□□□ -0.62
SHKBP1-203ENST00000594298 SMCO4Q9NRQ5 59 aa11.17□□□□□ -0.62
SHKBP1-203ENST00000594298 LINC01546A6NGU7 62 aa11.15□□□□□ -0.62
SHKBP1-203ENST00000594298 SLPIP03973 132 aa11.15□□□□□ -0.62
SHKBP1-203ENST00000594298 C5orf38Q86SI9 138 aa11.15□□□□□ -0.62
SHKBP1-203ENST00000594298 TOMM6Q96B49 74 aa11.15□□□□□ -0.62
SHKBP1-203ENST00000594298 PKIGQ9Y2B9 76 aa11.15□□□□□ -0.62
SHKBP1-203ENST00000594298 IGIPA6NJ69 53 aa11.14□□□□□ -0.63
SHKBP1-203ENST00000594298 TIMM17AQ99595 171 aa11.14□□□□□ -0.63
SHKBP1-203ENST00000594298 ERASQ7Z444 233 aa11.13□□□□□ -0.63
SHKBP1-203ENST00000594298 SCGB3A1Q96QR1 104 aa11.13□□□□□ -0.63
SHKBP1-203ENST00000594298 IGHV3OR16-9A0A0B4J2B5 98 aa11.12□□□□□ -0.63
SHKBP1-203ENST00000594298 RAB5BP61020 215 aa11.12□□□□□ -0.63
SHKBP1-203ENST00000594298 AMELXQ99217 191 aa11.12□□□□□ -0.63
SHKBP1-203ENST00000594298 UBE2D1P51668 147 aa11.11□□□□□ -0.63
SHKBP1-203ENST00000594298 SEC11AP67812 179 aa11.11□□□□□ -0.63
SHKBP1-203ENST00000594298 SYCNQ0VAF6 134 aa11.11□□□□□ -0.63
SHKBP1-203ENST00000594298 OR10D4PQ8NGN7 298 aa11.11□□□□□ -0.63
SHKBP1-203ENST00000594298 SPACA4Q8TDM5 124 aa11.11□□□□□ -0.63
SHKBP1-203ENST00000594298 DPH3Q96FX2 82 aa11.11□□□□□ -0.63
SHKBP1-203ENST00000594298 C2orf48Q96LS8 159 aa11.11□□□□□ -0.63
SHKBP1-203ENST00000594298 CARD19Q96LW7 228 aa11.11□□□□□ -0.63
SHKBP1-203ENST00000594298 YPEL4Q96NS1 127 aa11.11□□□□□ -0.63
SHKBP1-203ENST00000594298 A0A087WYN8 130 aa11.1□□□□□ -0.63
SHKBP1-203ENST00000594298 LINC00242Q5T6M2 205 aa11.1□□□□□ -0.63
SHKBP1-203ENST00000594298 C18orf32Q8TCD1 76 aa11.1□□□□□ -0.63
SHKBP1-203ENST00000594298 IGLV4-69A0A075B6H9 119 aa11.09□□□□□ -0.63
SHKBP1-203ENST00000594298 F8WDY8 70 aa11.09□□□□□ -0.63
SHKBP1-203ENST00000594298 LINC00614P0C842 121 aa11.09□□□□□ -0.63
SHKBP1-203ENST00000594298 CBLN2Q8IUK8 224 aa11.09□□□□□ -0.63
SHKBP1-203ENST00000594298 LINC00526Q96FQ7 95 aa11.09□□□□□ -0.63
SHKBP1-203ENST00000594298 PLAC8Q9NZF1 115 aa11.09□□□□□ -0.63
SHKBP1-203ENST00000594298 A0A087WZ39 114 aa11.08□□□□□ -0.64
SHKBP1-203ENST00000594298 CHTF8P0CG12 524 aa11.08□□□□□ -0.64
SHKBP1-203ENST00000594298 COX6A2Q02221 97 aa11.08□□□□□ -0.64
SHKBP1-203ENST00000594298 SPAG11BQ08648 103 aa11.08□□□□□ -0.64
SHKBP1-203ENST00000594298 LINC00173Q6ZV60 143 aa11.08□□□□□ -0.64
SHKBP1-203ENST00000594298 LINC01561Q8N1V8 128 aa11.08□□□□□ -0.64
SHKBP1-203ENST00000594298 ORAOV1Q8WV07 137 aa11.08□□□□□ -0.64
SHKBP1-203ENST00000594298 CAMK2N2Q96S95 79 aa11.08□□□□□ -0.64
SHKBP1-203ENST00000594298 FAM19A3Q7Z5A8 133 aa11.07□□□□□ -0.64
SHKBP1-203ENST00000594298 HERVK_113P63121 156 aa11.06□□□□□ -0.64
SHKBP1-203ENST00000594298 ZC2HC1BQ5TFG8 222 aa11.06□□□□□ -0.64
SHKBP1-203ENST00000594298 LINC00474Q9P2X8 69 aa11.06□□□□□ -0.64
SHKBP1-203ENST00000594298 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.05□□□□□ -0.64
SHKBP1-203ENST00000594298 GEMIN7Q9H840 131 aaKnown RBP11.05□□□□□ -0.64
SHKBP1-203ENST00000594298 C7orf33Q8WU49 177 aa11.04□□□□□ -0.64
SHKBP1-203ENST00000594298 HBDP02042 147 aa11.03□□□□□ -0.64
SHKBP1-203ENST00000594298 RNF151Q2KHN1 245 aa11.03□□□□□ -0.64
SHKBP1-203ENST00000594298 LOC107984640A0A0U1RRK4 108 aa11.02□□□□□ -0.65
SHKBP1-203ENST00000594298 NDUFA1O15239 70 aa11.02□□□□□ -0.65
SHKBP1-203ENST00000594298 PMVKQ15126 192 aa11.02□□□□□ -0.65
SHKBP1-203ENST00000594298 MAJINQ3KP22 176 aa11.02□□□□□ -0.65
SHKBP1-203ENST00000594298 URB1-AS1Q96HZ7 61 aa11.02□□□□□ -0.65
SHKBP1-203ENST00000594298 CST9LQ9H4G1 147 aa11.02□□□□□ -0.65
SHKBP1-203ENST00000594298 IGKV2-24A0A0C4DH68 120 aa11.01□□□□□ -0.65
SHKBP1-203ENST00000594298 CHCHD1Q96BP2 118 aaKnown RBP11.01□□□□□ -0.65
SHKBP1-203ENST00000594298 PACRGQ96M98 296 aaPredicted RBP11.01□□□□□ -0.65
SHKBP1-203ENST00000594298 MRPL35Q9NZE8 188 aaKnown RBP11.01□□□□□ -0.65
SHKBP1-203ENST00000594298 A0A0J9YXV3 536 aa11□□□□□ -0.65
SHKBP1-203ENST00000594298 TINCRA0A1B0GVN0 87 aa11□□□□□ -0.65
SHKBP1-203ENST00000594298 ATP5LO75964 103 aa11□□□□□ -0.65
SHKBP1-203ENST00000594298 PRSS2P07478 247 aa11□□□□□ -0.65
SHKBP1-203ENST00000594298 LINC01600Q96MT4 127 aa11□□□□□ -0.65
SHKBP1-203ENST00000594298 TNXBP22105 4242 aa11□□□□□ -0.65
SHKBP1-203ENST00000594298 A0A096LNI7 61 aa10.99□□□□□ -0.65
SHKBP1-203ENST00000594298 TRGC2P03986 189 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms