RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 PRR34Q9NV39 138 aa11.84□□□□□ -0.51
CXXC1-212ENST00000589940 CCL25O15444 150 aa11.83□□□□□ -0.52
CXXC1-212ENST00000589940 HERVK_113P61574 105 aa11.83□□□□□ -0.52
CXXC1-212ENST00000589940 SS18Q15532 418 aa11.83□□□□□ -0.52
CXXC1-212ENST00000589940 CDKN2A-AS1Q9UH64 79 aa11.83□□□□□ -0.52
CXXC1-212ENST00000589940 SIVA1O15304 175 aa11.82□□□□□ -0.52
CXXC1-212ENST00000589940 TMEM223A0PJW6 202 aa11.82□□□□□ -0.52
CXXC1-212ENST00000589940 IGKV2D-26A0A0A0MRZ7 120 aa11.81□□□□□ -0.52
CXXC1-212ENST00000589940 E9PLD3 99 aa11.81□□□□□ -0.52
CXXC1-212ENST00000589940 C21orf62-AS1Q17RA5 79 aa11.81□□□□□ -0.52
CXXC1-212ENST00000589940 ZFAND6Q6FIF0 208 aa11.81□□□□□ -0.52
CXXC1-212ENST00000589940 MUC7Q8TAX7 377 aa11.81□□□□□ -0.52
CXXC1-212ENST00000589940 H3BRM9 83 aa11.8□□□□□ -0.52
CXXC1-212ENST00000589940 NMUP48645 174 aa11.8□□□□□ -0.52
CXXC1-212ENST00000589940 SNHG12Q9BXW3 62 aa11.8□□□□□ -0.52
CXXC1-212ENST00000589940 CRPP02741 224 aa11.8□□□□□ -0.52
CXXC1-212ENST00000589940 ENHOQ6UWT2 76 aa11.8□□□□□ -0.52
CXXC1-212ENST00000589940 WWC2-AS2Q96NR7 200 aa11.8□□□□□ -0.52
CXXC1-212ENST00000589940 UBE2DNLQ8IWF7 75 aa11.79□□□□□ -0.52
CXXC1-212ENST00000589940 IGHV3OR16-9A0A0B4J2B5 98 aa11.79□□□□□ -0.52
CXXC1-212ENST00000589940 M0R143 59 aa11.79□□□□□ -0.52
CXXC1-212ENST00000589940 XCL1P47992 114 aa11.79□□□□□ -0.52
CXXC1-212ENST00000589940 UBE2WQ96B02 151 aa11.79□□□□□ -0.52
CXXC1-212ENST00000589940 SPINK8P0C7L1 97 aa11.78□□□□□ -0.52
CXXC1-212ENST00000589940 COX8AP10176 69 aa11.78□□□□□ -0.52
CXXC1-212ENST00000589940 CHCHD10Q8WYQ3 142 aaPredicted RBP11.78□□□□□ -0.52
CXXC1-212ENST00000589940 Q9H8V8 135 aa11.78□□□□□ -0.52
CXXC1-212ENST00000589940 IGLV10-54A0A075B6I4 117 aa11.77□□□□□ -0.53
CXXC1-212ENST00000589940 MIAQ16674 131 aa11.77□□□□□ -0.53
CXXC1-212ENST00000589940 DNAH1Q9P2D7 4330 aa11.77□□□□□ -0.53
CXXC1-212ENST00000589940 PCP4P48539 62 aa11.76□□□□□ -0.53
CXXC1-212ENST00000589940 CD164L2Q6UWJ8 174 aa11.76□□□□□ -0.53
CXXC1-212ENST00000589940 PCP2Q8IVA1 136 aa11.76□□□□□ -0.53
CXXC1-212ENST00000589940 UQCR10Q9UDW1 63 aa11.76□□□□□ -0.53
CXXC1-212ENST00000589940 IGHV3-64A0A075B6Q5 118 aa11.76□□□□□ -0.53
CXXC1-212ENST00000589940 TRAV8-3A0A0A6YYJ7 113 aa11.76□□□□□ -0.53
CXXC1-212ENST00000589940 TRAV8-4A0A0B4J246 113 aa11.76□□□□□ -0.53
CXXC1-212ENST00000589940 IGHV1-58A0A0C4DH39 117 aa11.76□□□□□ -0.53
CXXC1-212ENST00000589940 SLC25A34Q6PIV7 304 aa11.75□□□□□ -0.53
CXXC1-212ENST00000589940 MIEN1Q9BRT3 115 aa11.75□□□□□ -0.53
CXXC1-212ENST00000589940 A0A087WZ39 114 aa11.75□□□□□ -0.53
CXXC1-212ENST00000589940 SMIM1B2RUZ4 78 aa11.75□□□□□ -0.53
CXXC1-212ENST00000589940 LEPROTO15243 131 aa11.75□□□□□ -0.53
CXXC1-212ENST00000589940 DLEU1O43261 78 aa11.75□□□□□ -0.53
CXXC1-212ENST00000589940 VPS13DQ5THJ4 4388 aa11.74□□□□□ -0.53
CXXC1-212ENST00000589940 BOD1L2Q8IYS8 172 aa11.74□□□□□ -0.53
CXXC1-212ENST00000589940 C10orf126Q8N4M7 172 aa11.74□□□□□ -0.53
CXXC1-212ENST00000589940 TTTY13Q9BZ97 58 aa11.74□□□□□ -0.53
CXXC1-212ENST00000589940 IGLV5-39A0A0G2JS06 123 aa11.74□□□□□ -0.53
CXXC1-212ENST00000589940 J3QQQ9 107 aa11.74□□□□□ -0.53
CXXC1-212ENST00000589940 TSPEAR-AS2P59090 65 aa11.74□□□□□ -0.53
CXXC1-212ENST00000589940 C5orf38Q86SI9 138 aa11.74□□□□□ -0.53
CXXC1-212ENST00000589940 PLEKHB2Q96CS7 222 aa11.74□□□□□ -0.53
CXXC1-212ENST00000589940 TP73-AS1Q9UF72 201 aa11.74□□□□□ -0.53
CXXC1-212ENST00000589940 K7EP13 123 aa11.73□□□□□ -0.53
CXXC1-212ENST00000589940 IBA57-AS1B1ANH7 110 aa11.72□□□□□ -0.53
CXXC1-212ENST00000589940 FOXI1Q12951 378 aa11.72□□□□□ -0.53
CXXC1-212ENST00000589940 GAGE12HA6NDE8 117 aa11.71□□□□□ -0.53
CXXC1-212ENST00000589940 COX7A2LO14548 114 aa11.71□□□□□ -0.53
CXXC1-212ENST00000589940 LGALS3P17931 250 aaKnown RBP11.71□□□□□ -0.53
CXXC1-212ENST00000589940 LINC01561Q8N1V8 128 aa11.71□□□□□ -0.54
CXXC1-212ENST00000589940 MAPKAPK5-AS1Q8N8E1 139 aa11.71□□□□□ -0.54
CXXC1-212ENST00000589940 MYMXA0A1B0GTQ4 84 aa11.7□□□□□ -0.54
CXXC1-212ENST00000589940 C1orf43Q9BWL3 253 aa11.7□□□□□ -0.54
CXXC1-212ENST00000589940 ZNF815PA8K554 130 aa11.69□□□□□ -0.54
CXXC1-212ENST00000589940 KRTAP26-1Q6PEX3 210 aa11.68□□□□□ -0.54
CXXC1-212ENST00000589940 Q9HAA7 133 aa11.68□□□□□ -0.54
CXXC1-212ENST00000589940 IGKV2D-24A0A075B6R9 120 aa11.67□□□□□ -0.54
CXXC1-212ENST00000589940 MALP21145 153 aa11.67□□□□□ -0.54
CXXC1-212ENST00000589940 HNRNPA3P51991 378 aaKnown RBP11.67□□□□□ -0.54
CXXC1-212ENST00000589940 CASC10Q5T4H9 136 aa11.67□□□□□ -0.54
CXXC1-212ENST00000589940 C3orf84H3BNL1 204 aa11.66□□□□□ -0.54
CXXC1-212ENST00000589940 KRTAP1-5Q9BYS1 174 aa11.66□□□□□ -0.54
CXXC1-212ENST00000589940 C2orf91Q6ZV80 131 aa11.66□□□□□ -0.54
CXXC1-212ENST00000589940 COX7B2Q8TF08 81 aa11.66□□□□□ -0.54
CXXC1-212ENST00000589940 NDUFA12Q9UI09 145 aa11.66□□□□□ -0.54
CXXC1-212ENST00000589940 RMI2Q96E14 147 aa11.64□□□□□ -0.55
CXXC1-212ENST00000589940 TOMM7Q9P0U1 55 aa11.64□□□□□ -0.55
CXXC1-212ENST00000589940 APOMO95445 188 aa11.63□□□□□ -0.55
CXXC1-212ENST00000589940 TTC32Q5I0X7 151 aa11.63□□□□□ -0.55
CXXC1-212ENST00000589940 ORAOV1Q8WV07 137 aa11.63□□□□□ -0.55
CXXC1-212ENST00000589940 NDUFA1O15239 70 aa11.63□□□□□ -0.55
CXXC1-212ENST00000589940 SCGB1D4Q6XE38 83 aa11.63□□□□□ -0.55
CXXC1-212ENST00000589940 Q8IZM0 81 aa11.63□□□□□ -0.55
CXXC1-212ENST00000589940 NBDYA0A0U1RRE5 68 aa11.62□□□□□ -0.55
CXXC1-212ENST00000589940 HIGD1BQ9P298 99 aa11.62□□□□□ -0.55
CXXC1-212ENST00000589940 PRSS2P07478 247 aa11.61□□□□□ -0.55
CXXC1-212ENST00000589940 ZNF625Q96I27 306 aaPredicted RBP11.61□□□□□ -0.55
CXXC1-212ENST00000589940 C6orf226Q5I0X4 101 aa11.6□□□□□ -0.55
CXXC1-212ENST00000589940 COX11Q9Y6N1 276 aa11.6□□□□□ -0.55
CXXC1-212ENST00000589940 KIAA0087Q14695 138 aa11.59□□□□□ -0.55
CXXC1-212ENST00000589940 ALMS1Q8TCU4 4167 aa11.59□□□□□ -0.55
CXXC1-212ENST00000589940 A0A0J9YXY3 114 aa11.59□□□□□ -0.55
CXXC1-212ENST00000589940 SPAG11BQ08648 103 aa11.58□□□□□ -0.56
CXXC1-212ENST00000589940 CFAP161Q6P656 301 aa11.58□□□□□ -0.56
CXXC1-212ENST00000589940 SFTA2Q6UW10 78 aa11.58□□□□□ -0.56
CXXC1-212ENST00000589940 DNAH10Q8IVF4 4471 aa11.58□□□□□ -0.56
CXXC1-212ENST00000589940 HERV-K104P63124 156 aa11.58□□□□□ -0.56
CXXC1-212ENST00000589940 TM2D2Q9BX73 214 aa11.58□□□□□ -0.56
CXXC1-212ENST00000589940 C15orf56Q8N910 161 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms