RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 Q6ZN92 141 aa13.04□□□□□ -0.32
DDX39A-207ENST00000588542 ERASQ7Z444 233 aa13.04□□□□□ -0.32
DDX39A-207ENST00000588542 VCX2Q9H322 139 aa13.04□□□□□ -0.32
DDX39A-207ENST00000588542 A0A096LNJ9 63 aa13.03□□□□□ -0.32
DDX39A-207ENST00000588542 COLCA2A8K830 154 aa13.03□□□□□ -0.32
DDX39A-207ENST00000588542 LINC00614P0C842 121 aa13.03□□□□□ -0.32
DDX39A-207ENST00000588542 LINC00242Q5T6M2 205 aa13.03□□□□□ -0.32
DDX39A-207ENST00000588542 SCGB3A1Q96QR1 104 aa13.03□□□□□ -0.32
DDX39A-207ENST00000588542 COX6A2Q02221 97 aa13.02□□□□□ -0.33
DDX39A-207ENST00000588542 LINC00526Q96FQ7 95 aa13.02□□□□□ -0.33
DDX39A-207ENST00000588542 LINC01549A6NIU2 74 aa13.01□□□□□ -0.33
DDX39A-207ENST00000588542 MALP21145 153 aa13.01□□□□□ -0.33
DDX39A-207ENST00000588542 SDIM1Q6ZPB5 146 aa13.01□□□□□ -0.33
DDX39A-207ENST00000588542 C2orf88Q9BSF0 95 aa13.01□□□□□ -0.33
DDX39A-207ENST00000588542 FAT1Q14517 4588 aa13□□□□□ -0.33
DDX39A-207ENST00000588542 TRAV16A0A0A6YYK6 109 aaPredicted RBP13□□□□□ -0.33
DDX39A-207ENST00000588542 SCO1O75880 301 aa13□□□□□ -0.33
DDX39A-207ENST00000588542 TRGC2P03986 189 aa13□□□□□ -0.33
DDX39A-207ENST00000588542 PAPPA-AS1Q5QFB9 102 aa13□□□□□ -0.33
DDX39A-207ENST00000588542 FAM19A3Q7Z5A8 133 aa13□□□□□ -0.33
DDX39A-207ENST00000588542 RAB5BP61020 215 aa12.98□□□□□ -0.33
DDX39A-207ENST00000588542 IGHV3-64A0A075B6Q5 118 aa12.97□□□□□ -0.33
DDX39A-207ENST00000588542 A0A087WZ39 114 aa12.97□□□□□ -0.33
DDX39A-207ENST00000588542 ZNF561-AS1K7EIQ3 104 aa12.97□□□□□ -0.33
DDX39A-207ENST00000588542 APOMO95445 188 aa12.97□□□□□ -0.33
DDX39A-207ENST00000588542 PMCHL1Q16048 86 aa12.97□□□□□ -0.33
DDX39A-207ENST00000588542 Q8N1X5 172 aa12.97□□□□□ -0.33
DDX39A-207ENST00000588542 KRTAP4-5Q9BYR2 181 aa12.97□□□□□ -0.33
DDX39A-207ENST00000588542 IGLV4-69A0A075B6H9 119 aa12.96□□□□□ -0.33
DDX39A-207ENST00000588542 VPS13BQ7Z7G8 4022 aa12.96□□□□□ -0.34
DDX39A-207ENST00000588542 PANO1I0J062 215 aa12.95□□□□□ -0.34
DDX39A-207ENST00000588542 HBDP02042 147 aa12.95□□□□□ -0.34
DDX39A-207ENST00000588542 SCXQ7RTU7 201 aa12.95□□□□□ -0.34
DDX39A-207ENST00000588542 OR10D4PQ8NGN7 298 aa12.95□□□□□ -0.34
DDX39A-207ENST00000588542 CHAC1Q9BUX1 264 aa12.95□□□□□ -0.34
DDX39A-207ENST00000588542 PDZD11Q5EBL8 140 aa12.94□□□□□ -0.34
DDX39A-207ENST00000588542 ORAOV1Q8WV07 137 aa12.94□□□□□ -0.34
DDX39A-207ENST00000588542 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.94□□□□□ -0.34
DDX39A-207ENST00000588542 A0A0J9YXV3 536 aa12.93□□□□□ -0.34
DDX39A-207ENST00000588542 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.93□□□□□ -0.34
DDX39A-207ENST00000588542 SMR3BP02814 79 aaPredicted RBP12.93□□□□□ -0.34
DDX39A-207ENST00000588542 SPAG11BQ08648 103 aa12.93□□□□□ -0.34
DDX39A-207ENST00000588542 SYCNQ0VAF6 134 aa12.93□□□□□ -0.34
DDX39A-207ENST00000588542 CHCHD1Q96BP2 118 aaKnown RBP12.93□□□□□ -0.34
DDX39A-207ENST00000588542 C2orf48Q96LS8 159 aa12.93□□□□□ -0.34
DDX39A-207ENST00000588542 CARD19Q96LW7 228 aa12.93□□□□□ -0.34
DDX39A-207ENST00000588542 CST9LQ9H4G1 147 aa12.93□□□□□ -0.34
DDX39A-207ENST00000588542 ABCA13Q86UQ4 5058 aa12.93□□□□□ -0.34
DDX39A-207ENST00000588542 PMVKQ15126 192 aa12.92□□□□□ -0.34
DDX39A-207ENST00000588542 Q6ZRU5 148 aa12.92□□□□□ -0.34
DDX39A-207ENST00000588542 LINC01561Q8N1V8 128 aa12.92□□□□□ -0.34
DDX39A-207ENST00000588542 CIRBP-AS1Q8TBR5 109 aa12.92□□□□□ -0.34
DDX39A-207ENST00000588542 HERVK_113P63121 156 aa12.91□□□□□ -0.34
DDX39A-207ENST00000588542 SEC11AP67812 179 aa12.91□□□□□ -0.34
DDX39A-207ENST00000588542 CIRBPQ14011 172 aaKnown RBP12.91□□□□□ -0.34
DDX39A-207ENST00000588542 KIAA0087Q14695 138 aa12.9□□□□□ -0.34
DDX39A-207ENST00000588542 BAGE3Q86Y29 109 aa12.9□□□□□ -0.34
DDX39A-207ENST00000588542 CAMK2N2Q96S95 79 aa12.9□□□□□ -0.34
DDX39A-207ENST00000588542 CDKN2A-AS1Q9UH64 79 aa12.9□□□□□ -0.34
DDX39A-207ENST00000588542 TINCRA0A1B0GVN0 87 aa12.89□□□□□ -0.35
DDX39A-207ENST00000588542 CHTF8P0CG12 524 aa12.89□□□□□ -0.35
DDX39A-207ENST00000588542 LINC00310P59036 64 aa12.89□□□□□ -0.35
DDX39A-207ENST00000588542 GEMIN7Q9H840 131 aaKnown RBP12.88□□□□□ -0.35
DDX39A-207ENST00000588542 ATP5LO75964 103 aa12.87□□□□□ -0.35
DDX39A-207ENST00000588542 SPACA4Q8TDM5 124 aa12.87□□□□□ -0.35
DDX39A-207ENST00000588542 PCLOQ9Y6V0 5065 aa12.86□□□□□ -0.35
DDX39A-207ENST00000588542 IGLV5-45A0A087WSX0 123 aa12.86□□□□□ -0.35
DDX39A-207ENST00000588542 F8WDY8 70 aa12.86□□□□□ -0.35
DDX39A-207ENST00000588542 A0A096LNI7 61 aa12.85□□□□□ -0.35
DDX39A-207ENST00000588542 SERF1AO75920 110 aa12.85□□□□□ -0.35
DDX39A-207ENST00000588542 C10orf25Q5T742 122 aa12.85□□□□□ -0.35
DDX39A-207ENST00000588542 FAM19A2Q8N3H0 131 aa12.85□□□□□ -0.35
DDX39A-207ENST00000588542 SRRM2Q9UQ35 2752 aaKnown RBP12.84□□□□□ -0.35
DDX39A-207ENST00000588542 EPM2AB3EWF7 344 aa12.84□□□□□ -0.35
DDX39A-207ENST00000588542 HSBP1O75506 76 aa12.84□□□□□ -0.35
DDX39A-207ENST00000588542 NDUFA6P56556 154 aa12.84□□□□□ -0.35
DDX39A-207ENST00000588542 RNF151Q2KHN1 245 aa12.84□□□□□ -0.35
DDX39A-207ENST00000588542 Q5VSD8 79 aa12.84□□□□□ -0.35
DDX39A-207ENST00000588542 UNQ6190/PRO20217Q6UXQ8 127 aa12.84□□□□□ -0.35
DDX39A-207ENST00000588542 LINC00469Q8N7U9 141 aa12.84□□□□□ -0.35
DDX39A-207ENST00000588542 MRPL35Q9NZE8 188 aaKnown RBP12.84□□□□□ -0.35
DDX39A-207ENST00000588542 IGKV2-24A0A0C4DH68 120 aa12.83□□□□□ -0.36
DDX39A-207ENST00000588542 NDUFA1O15239 70 aa12.83□□□□□ -0.36
DDX39A-207ENST00000588542 NUPR1O60356 82 aa12.83□□□□□ -0.36
DDX39A-207ENST00000588542 IGLC3P0DOY3 106 aa12.83□□□□□ -0.36
DDX39A-207ENST00000588542 SMIM1B2RUZ4 78 aa12.82□□□□□ -0.36
DDX39A-207ENST00000588542 LINC00528Q8N1L1 170 aa12.82□□□□□ -0.36
DDX39A-207ENST00000588542 A0A087WYN8 130 aa12.81□□□□□ -0.36
DDX39A-207ENST00000588542 LOC107984640A0A0U1RRK4 108 aa12.81□□□□□ -0.36
DDX39A-207ENST00000588542 FAM229AH3BQW9 127 aa12.81□□□□□ -0.36
DDX39A-207ENST00000588542 C2orf82Q6UX34 121 aa12.81□□□□□ -0.36
DDX39A-207ENST00000588542 Q8IZM0 81 aa12.81□□□□□ -0.36
DDX39A-207ENST00000588542 IFI27L1Q96BM0 104 aa12.81□□□□□ -0.36
DDX39A-207ENST00000588542 PACRGQ96M98 296 aaPredicted RBP12.81□□□□□ -0.36
DDX39A-207ENST00000588542 C6orf48Q9UBA6 75 aa12.81□□□□□ -0.36
DDX39A-207ENST00000588542 PKIGQ9Y2B9 76 aa12.81□□□□□ -0.36
DDX39A-207ENST00000588542 ATP6V1G1O75348 118 aa12.8□□□□□ -0.36
DDX39A-207ENST00000588542 MAJINQ3KP22 176 aa12.8□□□□□ -0.36
DDX39A-207ENST00000588542 PLAC8Q9NZF1 115 aa12.8□□□□□ -0.36
DDX39A-207ENST00000588542 TOMM7Q9P0U1 55 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms