RNA–Protein interactions for RNA: ENST00000587560.5

H3F3B-206, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene H3F3B, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-206ENST00000587560 IGHV3OR16-9A0A0B4J2B5 98 aa12.12□□□□□ -0.47
H3F3B-206ENST00000587560 RTL8CO15255 209 aa12.12□□□□□ -0.47
H3F3B-206ENST00000587560 CD164L2Q6UWJ8 174 aa12.12□□□□□ -0.47
H3F3B-206ENST00000587560 TMA7Q9Y2S6 64 aaKnown RBP12.12□□□□□ -0.47
H3F3B-206ENST00000587560 COX11Q9Y6N1 276 aa12.12□□□□□ -0.47
H3F3B-206ENST00000587560 IGKV2D-24A0A075B6R9 120 aa12.11□□□□□ -0.47
H3F3B-206ENST00000587560 PRSS1P07477 247 aa12.11□□□□□ -0.47
H3F3B-206ENST00000587560 IGLC3P0DOY3 106 aa12.11□□□□□ -0.47
H3F3B-206ENST00000587560 COX6A2Q02221 97 aa12.11□□□□□ -0.47
H3F3B-206ENST00000587560 ODF1Q14990 250 aa12.11□□□□□ -0.47
H3F3B-206ENST00000587560 TM2D2Q9BX73 214 aa12.11□□□□□ -0.47
H3F3B-206ENST00000587560 IGLV5-45A0A087WSX0 123 aa12.1□□□□□ -0.47
H3F3B-206ENST00000587560 A0A0J9YXV3 536 aa12.1□□□□□ -0.47
H3F3B-206ENST00000587560 SYS1-DBNDD2H3BUS1 97 aa12.1□□□□□ -0.47
H3F3B-206ENST00000587560 C3orf79P0CE67 100 aa12.1□□□□□ -0.47
H3F3B-206ENST00000587560 TINCRA0A1B0GVN0 87 aa12.09□□□□□ -0.47
H3F3B-206ENST00000587560 GAGE12HA6NDE8 117 aa12.09□□□□□ -0.47
H3F3B-206ENST00000587560 S100A2P29034 98 aa12.09□□□□□ -0.47
H3F3B-206ENST00000587560 MAP1LC3CQ9BXW4 147 aa12.09□□□□□ -0.47
H3F3B-206ENST00000587560 DNAH2Q9P225 4427 aa12.08□□□□□ -0.47
H3F3B-206ENST00000587560 XCL1P47992 114 aa12.08□□□□□ -0.48
H3F3B-206ENST00000587560 LRCOL1A6NCL2 159 aa12.07□□□□□ -0.48
H3F3B-206ENST00000587560 F8VRH5 84 aa12.07□□□□□ -0.48
H3F3B-206ENST00000587560 SEC11AP67812 179 aa12.07□□□□□ -0.48
H3F3B-206ENST00000587560 LINC01545Q5VT33 79 aa12.07□□□□□ -0.48
H3F3B-206ENST00000587560 PET117Q6UWS5 81 aa12.07□□□□□ -0.48
H3F3B-206ENST00000587560 MRPL35Q9NZE8 188 aaKnown RBP12.07□□□□□ -0.48
H3F3B-206ENST00000587560 CHTOPQ9Y3Y2 248 aaKnown RBP12.07□□□□□ -0.48
H3F3B-206ENST00000587560 C11orf86A6NJI1 115 aa12.06□□□□□ -0.48
H3F3B-206ENST00000587560 HERVK_113P63121 156 aa12.06□□□□□ -0.48
H3F3B-206ENST00000587560 PKHD1P08F94 4074 aa12.06□□□□□ -0.48
H3F3B-206ENST00000587560 A0A087WZ39 114 aa12.05□□□□□ -0.48
H3F3B-206ENST00000587560 LINC01561Q8N1V8 128 aa12.05□□□□□ -0.48
H3F3B-206ENST00000587560 DNAH17Q9UFH2 4485 aa12.04□□□□□ -0.48
H3F3B-206ENST00000587560 WFDC2Q14508 124 aa12.04□□□□□ -0.48
H3F3B-206ENST00000587560 CDKN2A-AS1Q9UH64 79 aa12.04□□□□□ -0.48
H3F3B-206ENST00000587560 ZNF22P17026 224 aaPredicted RBP12.03□□□□□ -0.48
H3F3B-206ENST00000587560 C15orf56Q8N910 161 aa12.03□□□□□ -0.48
H3F3B-206ENST00000587560 CHAC1Q9BUX1 264 aa12.03□□□□□ -0.48
H3F3B-206ENST00000587560 H0Y8G0 127 aa12.02□□□□□ -0.49
H3F3B-206ENST00000587560 COX7A2LO14548 114 aa12.02□□□□□ -0.49
H3F3B-206ENST00000587560 KRTDAPP60985 99 aa12.02□□□□□ -0.49
H3F3B-206ENST00000587560 C5orf38Q86SI9 138 aa12.02□□□□□ -0.49
H3F3B-206ENST00000587560 GEMIN7Q9H840 131 aaKnown RBP12.02□□□□□ -0.49
H3F3B-206ENST00000587560 PMCHL2Q9BQD1 86 aa12.01□□□□□ -0.49
H3F3B-206ENST00000587560 A0A087WTM6 91 aa12□□□□□ -0.49
H3F3B-206ENST00000587560 PSCAO43653 123 aa12□□□□□ -0.49
H3F3B-206ENST00000587560 TNP2Q05952 138 aa12□□□□□ -0.49
H3F3B-206ENST00000587560 OR10D4PQ8NGN7 298 aa12□□□□□ -0.49
H3F3B-206ENST00000587560 USP17L23D6RBM5 183 aa11.99□□□□□ -0.49
H3F3B-206ENST00000587560 DPM2O94777 84 aa11.99□□□□□ -0.49
H3F3B-206ENST00000587560 PLNP26678 52 aa11.99□□□□□ -0.49
H3F3B-206ENST00000587560 LINC00469Q8N7U9 141 aa11.99□□□□□ -0.49
H3F3B-206ENST00000587560 IGHV3-64A0A075B6Q5 118 aa11.98□□□□□ -0.49
H3F3B-206ENST00000587560 GVQW2A0A096LPI5 108 aaPredicted RBP11.98□□□□□ -0.49
H3F3B-206ENST00000587560 IGHV1-58A0A0C4DH39 117 aa11.98□□□□□ -0.49
H3F3B-206ENST00000587560 SMIM1B2RUZ4 78 aa11.98□□□□□ -0.49
H3F3B-206ENST00000587560 LINC00336Q6ZUF6 198 aa11.98□□□□□ -0.49
H3F3B-206ENST00000587560 IGLV5-39A0A0G2JS06 123 aa11.97□□□□□ -0.49
H3F3B-206ENST00000587560 IGKCP01834 107 aa11.97□□□□□ -0.49
H3F3B-206ENST00000587560 FAT2Q9NYQ8 4349 aa11.96□□□□□ -0.49
H3F3B-206ENST00000587560 TMEM223A0PJW6 202 aa11.96□□□□□ -0.49
H3F3B-206ENST00000587560 KIAA0087Q14695 138 aa11.96□□□□□ -0.49
H3F3B-206ENST00000587560 CFAP161Q6P656 301 aa11.96□□□□□ -0.49
H3F3B-206ENST00000587560 DYNC1H1Q14204 4646 aaKnown RBP11.96□□□□□ -0.5
H3F3B-206ENST00000587560 LECT2O14960 151 aa11.95□□□□□ -0.5
H3F3B-206ENST00000587560 H3BRM9 83 aa11.94□□□□□ -0.5
H3F3B-206ENST00000587560 APOMO95445 188 aa11.94□□□□□ -0.5
H3F3B-206ENST00000587560 SPINK8P0C7L1 97 aa11.94□□□□□ -0.5
H3F3B-206ENST00000587560 MALP21145 153 aa11.94□□□□□ -0.5
H3F3B-206ENST00000587560 Q8N814 137 aa11.94□□□□□ -0.5
H3F3B-206ENST00000587560 A0A1B0GVY2 172 aa11.93□□□□□ -0.5
H3F3B-206ENST00000587560 C20orf202A1L168 122 aa11.93□□□□□ -0.5
H3F3B-206ENST00000587560 TMEM170BQ5T4T1 132 aa11.93□□□□□ -0.5
H3F3B-206ENST00000587560 SLPIP03973 132 aa11.92□□□□□ -0.5
H3F3B-206ENST00000587560 C14orf177Q52M58 125 aa11.92□□□□□ -0.5
H3F3B-206ENST00000587560 NTN5Q8WTR8 489 aaPredicted RBP11.92□□□□□ -0.5
H3F3B-206ENST00000587560 ORAOV1Q8WV07 137 aa11.92□□□□□ -0.5
H3F3B-206ENST00000587560 JOSD1Q15040 202 aaPredicted RBP11.91□□□□□ -0.5
H3F3B-206ENST00000587560 HIGD2BQ4VC39 106 aa11.91□□□□□ -0.5
H3F3B-206ENST00000587560 Q8IZM0 81 aa11.91□□□□□ -0.5
H3F3B-206ENST00000587560 HSPG2P98160 4391 aa11.9□□□□□ -0.5
H3F3B-206ENST00000587560 AKR1D1P51857 326 aa11.9□□□□□ -0.5
H3F3B-206ENST00000587560 C2orf48Q96LS8 159 aa11.9□□□□□ -0.5
H3F3B-206ENST00000587560 CNBPP62633 177 aaKnown RBP11.89□□□□□ -0.51
H3F3B-206ENST00000587560 SPAG11BQ08648 103 aa11.89□□□□□ -0.51
H3F3B-206ENST00000587560 LINC00526Q96FQ7 95 aa11.89□□□□□ -0.51
H3F3B-206ENST00000587560 hDV102S1A0JD36 115 aa11.88□□□□□ -0.51
H3F3B-206ENST00000587560 F8WDY8 70 aa11.88□□□□□ -0.51
H3F3B-206ENST00000587560 DNAH11Q96DT5 4516 aa11.87□□□□□ -0.51
H3F3B-206ENST00000587560 LOC105371267A0A1B0GV96 52 aa11.87□□□□□ -0.51
H3F3B-206ENST00000587560 PYY3Q5JQD4 70 aa11.87□□□□□ -0.51
H3F3B-206ENST00000587560 COX7B2Q8TF08 81 aa11.87□□□□□ -0.51
H3F3B-206ENST00000587560 E9PLD3 99 aa11.86□□□□□ -0.51
H3F3B-206ENST00000587560 ZNF561-AS1K7EIQ3 104 aa11.86□□□□□ -0.51
H3F3B-206ENST00000587560 KRTAP10-2P60368 255 aa11.86□□□□□ -0.51
H3F3B-206ENST00000587560 ATOH7Q8N100 152 aa11.86□□□□□ -0.51
H3F3B-206ENST00000587560 STPG4Q8N801 248 aa11.86□□□□□ -0.51
H3F3B-206ENST00000587560 PKD1P98161 4303 aa11.85□□□□□ -0.51
H3F3B-206ENST00000587560 EREGO14944 169 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms